RNA–Protein interactions for RNA: ENST00000495799.5

PPP1R3F-205, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 1 (best) BASIC

Gene PPP1R3F, Length 1,537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-205ENST00000495799 FAM135AQ9P2D6 1515 aa35.43■■■■□ 3.26
PPP1R3F-205ENST00000495799 DEPDC5O75140 1603 aa35.42■■■■□ 3.26
PPP1R3F-205ENST00000495799 ABCA6Q8N139 1617 aa35.42■■■■□ 3.26
PPP1R3F-205ENST00000495799 SIN3AQ96ST3 1273 aa35.4■■■■□ 3.26
PPP1R3F-205ENST00000495799 NEUROD1Q13562 356 aa35.37■■■■□ 3.25
PPP1R3F-205ENST00000495799 DIP2CQ9Y2E4 1556 aa35.36■■■■□ 3.25
PPP1R3F-205ENST00000495799 ANKRD30BQ9BXX2 1392 aa35.36■■■■□ 3.25
PPP1R3F-205ENST00000495799 PKD2Q13563 968 aa35.36■■■■□ 3.25
PPP1R3F-205ENST00000495799 BCORL1Q5H9F3 1711 aa35.34■■■■□ 3.25
PPP1R3F-205ENST00000495799 GRWD1Q9BQ67 446 aaKnown RBP eCLIP35.33■■■■□ 3.25
PPP1R3F-205ENST00000495799 KANK1Q14678 1352 aa35.33■■■■□ 3.25
PPP1R3F-205ENST00000495799 PRDM15P57071 1507 aaPredicted RBP35.3■■■■□ 3.24
PPP1R3F-205ENST00000495799 RNF17Q9BXT8 1623 aaKnown RBP35.3■■■■□ 3.24
PPP1R3F-205ENST00000495799 KIF3BO15066 747 aa35.3■■■■□ 3.24
PPP1R3F-205ENST00000495799 TONSLQ96HA7 1378 aa35.3■■■■□ 3.24
PPP1R3F-205ENST00000495799 FOXD1Q16676 465 aa35.29■■■■□ 3.24
PPP1R3F-205ENST00000495799 VWDEQ8N2E2 1590 aa35.25■■■■□ 3.23
PPP1R3F-205ENST00000495799 RPRD2Q5VT52 1461 aaKnown RBP35.23■■■■□ 3.23
PPP1R3F-205ENST00000495799 MROH1Q8NDA8 1641 aa35.23■■■■□ 3.23
PPP1R3F-205ENST00000495799 YEATS2Q9ULM3 1422 aa35.23■■■■□ 3.23
PPP1R3F-205ENST00000495799 TRHP20396 242 aaPredicted RBP35.22■■■■□ 3.23
PPP1R3F-205ENST00000495799 TET3O43151 1660 aa35.21■■■■□ 3.23
PPP1R3F-205ENST00000495799 REREQ9P2R6 1566 aa35.2■■■■□ 3.23
PPP1R3F-205ENST00000495799 ATP10AO60312 1499 aa35.19■■■■□ 3.22
PPP1R3F-205ENST00000495799 COL17A1Q9UMD9 1497 aaPredicted RBP35.16■■■■□ 3.22
PPP1R3F-205ENST00000495799 LMTK2Q8IWU2 1503 aa35.14■■■■□ 3.22
PPP1R3F-205ENST00000495799 ARHGEF40Q8TER5 1519 aa35.14■■■■□ 3.22
PPP1R3F-205ENST00000495799 E9PCH4 1651 aa35.1■■■■□ 3.21
PPP1R3F-205ENST00000495799 AGLP35573 1532 aa35.07■■■■□ 3.2
PPP1R3F-205ENST00000495799 PPP1R15AO75807 674 aaPredicted RBP35.06■■■■□ 3.2
PPP1R3F-205ENST00000495799 CEP152O94986 1710 aa35.06■■■■□ 3.2
PPP1R3F-205ENST00000495799 EFCAB6Q5THR3 1501 aa35.06■■■■□ 3.2
PPP1R3F-205ENST00000495799 ZC3H13Q5T200 1668 aaKnown RBP35.05■■■■□ 3.2
PPP1R3F-205ENST00000495799 CCDC144AA2RUR9 1427 aa35.05■■■■□ 3.2
PPP1R3F-205ENST00000495799 GGT6Q6P531 493 aa35.03■■■■□ 3.2
PPP1R3F-205ENST00000495799 SPHKAPQ2M3C7 1700 aa35.01■■■■□ 3.2
PPP1R3F-205ENST00000495799 PLA2R1Q13018 1463 aa34.99■■■■□ 3.19
PPP1R3F-205ENST00000495799 ABCC3O15438 1527 aa34.99■■■■□ 3.19
PPP1R3F-205ENST00000495799 TRPM2O94759 1503 aa34.98■■■■□ 3.19
PPP1R3F-205ENST00000495799 PTPRTO14522 1441 aa34.96■■■■□ 3.19
PPP1R3F-205ENST00000495799 WASHC2CQ9Y4E1 1318 aa34.95■■■■□ 3.19
PPP1R3F-205ENST00000495799 L3MBTL2Q969R5 705 aa34.95■■■■□ 3.19
PPP1R3F-205ENST00000495799 CAMSAP1Q5T5Y3 1602 aa34.93■■■■□ 3.18
PPP1R3F-205ENST00000495799 PPP6R1Q9UPN7 881 aa34.91■■■■□ 3.18
PPP1R3F-205ENST00000495799 ZNF316A6NFI3 1004 aaPredicted RBP34.86■■■■□ 3.17
PPP1R3F-205ENST00000495799 ARHGAP31Q2M1Z3 1444 aa34.84■■■■□ 3.17
PPP1R3F-205ENST00000495799 NPATQ14207 1427 aa34.83■■■■□ 3.17
PPP1R3F-205ENST00000495799 SIGLEC1Q9BZZ2 1709 aa34.82■■■■□ 3.16
PPP1R3F-205ENST00000495799 CLTCL1P53675 1640 aa34.8■■■■□ 3.16
PPP1R3F-205ENST00000495799 CNTLNQ9NXG0 1405 aa34.78■■■■□ 3.16
PPP1R3F-205ENST00000495799 NEURL4Q96JN8 1562 aa34.77■■■■□ 3.16
PPP1R3F-205ENST00000495799 UHRF1BP1Q6BDS2 1440 aa34.72■■■■□ 3.15
PPP1R3F-205ENST00000495799 KIF1BO60333 1816 aa34.72■■■■□ 3.15
PPP1R3F-205ENST00000495799 SPATA31E1Q6ZUB1 1445 aa34.71■■■■□ 3.15
PPP1R3F-205ENST00000495799 CLTCQ00610 1675 aaKnown RBP34.7■■■■□ 3.15
PPP1R3F-205ENST00000495799 NOS1P29475 1434 aa34.7■■■■□ 3.15
PPP1R3F-205ENST00000495799 ARID4BQ4LE39 1312 aaPredicted RBP34.68■■■■□ 3.14
PPP1R3F-205ENST00000495799 DCAF11Q8TEB1 546 aa34.66■■■■□ 3.14
PPP1R3F-205ENST00000495799 ESF1Q9H501 851 aaKnown RBP34.65■■■■□ 3.14
PPP1R3F-205ENST00000495799 PREX1Q8TCU6 1659 aa34.65■■■■□ 3.14
PPP1R3F-205ENST00000495799 CFAP65Q6ZU64 1925 aaKnown RBP34.65■■■■□ 3.14
PPP1R3F-205ENST00000495799 MLECQ14165 292 aa34.64■■■■□ 3.14
PPP1R3F-205ENST00000495799 RGL3Q3MIN7 710 aa34.64■■■■□ 3.14
PPP1R3F-205ENST00000495799 NBPF8Q3BBV2 869 aa34.63■■■■□ 3.13
PPP1R3F-205ENST00000495799 STAC3Q96MF2 364 aa34.63■■■■□ 3.13
PPP1R3F-205ENST00000495799 UGGT1Q9NYU2 1555 aa34.62■■■■□ 3.13
PPP1R3F-205ENST00000495799 PIK3C2BO00750 1634 aa34.61■■■■□ 3.13
PPP1R3F-205ENST00000495799 SYNMO15061 1565 aa34.6■■■■□ 3.13
PPP1R3F-205ENST00000495799 KDM2AQ9Y2K7 1162 aa34.58■■■■□ 3.13
PPP1R3F-205ENST00000495799 RALGAPBQ86X10 1494 aa34.57■■■■□ 3.13
PPP1R3F-205ENST00000495799 ADGRB3O60242 1522 aa34.57■■■■□ 3.13
PPP1R3F-205ENST00000495799 ZNF326Q5BKZ1 582 aaKnown RBP34.56■■■■□ 3.12
PPP1R3F-205ENST00000495799 ERVK-7P63135 1459 aa34.56■■■■□ 3.12
PPP1R3F-205ENST00000495799 PRAG1Q86YV5 1406 aa34.55■■■■□ 3.12
PPP1R3F-205ENST00000495799 SLC52A1Q9NWF4 448 aa34.55■■■■□ 3.12
PPP1R3F-205ENST00000495799 MROH2AA6NES4 1674 aa34.54■■■■□ 3.12
PPP1R3F-205ENST00000495799 SPATA31D1Q6ZQQ2 1576 aa34.51■■■■□ 3.12
PPP1R3F-205ENST00000495799 EIF4G2P78344 907 aaKnown RBP eCLIP34.5■■■■□ 3.116e-6■■■■□ 25.1
PPP1R3F-205ENST00000495799 TRPM1Q7Z4N2 1603 aa34.49■■■■□ 3.11
PPP1R3F-205ENST00000495799 IFT172Q9UG01 1749 aa34.48■■■■□ 3.11
PPP1R3F-205ENST00000495799 ZMYM3Q14202 1370 aa34.47■■■■□ 3.11
PPP1R3F-205ENST00000495799 MYOM2P54296 1465 aa34.47■■■■□ 3.11
PPP1R3F-205ENST00000495799 MADDQ8WXG6 1647 aa34.45■■■■□ 3.1
PPP1R3F-205ENST00000495799 CHGAP10645 457 aaKnown RBP34.44■■■■□ 3.1
PPP1R3F-205ENST00000495799 RPGRIP1LQ68CZ1 1315 aa34.43■■■■□ 3.1
PPP1R3F-205ENST00000495799 FER1L4A9Z1Z3 1794 aa34.42■■■■□ 3.1
PPP1R3F-205ENST00000495799 LAMC1P11047 1609 aa34.4■■■■□ 3.1
PPP1R3F-205ENST00000495799 FBXO31Q5XUX0 539 aaPredicted RBP34.4■■■■□ 3.1
PPP1R3F-205ENST00000495799 DIEXFQ68CQ4 756 aaKnown RBP34.4■■■■□ 3.1
PPP1R3F-205ENST00000495799 ROCK2O75116 1388 aaKnown RBP34.39■■■■□ 3.1
PPP1R3F-205ENST00000495799 PPLO60437 1756 aa34.39■■■■□ 3.1
PPP1R3F-205ENST00000495799 IDI1Q13907 227 aa34.39■■■■□ 3.1
PPP1R3F-205ENST00000495799 HSPA5P11021 654 aaKnown RBP34.38■■■■□ 3.09
PPP1R3F-205ENST00000495799 KIAA1210Q9ULL0 1709 aa34.36■■■■□ 3.09
PPP1R3F-205ENST00000495799 TMEM131LA2VDJ0 1609 aa34.35■■■■□ 3.09
PPP1R3F-205ENST00000495799 CARD11Q9BXL7 1154 aa34.35■■■■□ 3.09
PPP1R3F-205ENST00000495799 GPRASP1Q5JY77 1395 aa34.34■■■■□ 3.09
PPP1R3F-205ENST00000495799 USP47Q96K76 1375 aa34.33■■■■□ 3.09
PPP1R3F-205ENST00000495799 NRXN1Q9ULB1 1477 aa34.31■■■■□ 3.08
PPP1R3F-205ENST00000495799 HIRIP3Q9BW71 556 aaPredicted RBP34.29■■■■□ 3.08
Retrieved 100 of 20,778 RNA–protein pairs in 263.7 ms