RNA–Protein interactions for RNA: ENST00000495553.1

ACTN4-207, Transcript of actinin alpha 4, humanhuman

TSL 5

Gene ACTN4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-207ENST00000495553 ACIN1Q9UKV3 1341 aaKnown RBP14.15□□□□□ -0.15
ACTN4-207ENST00000495553 WASHC2CQ9Y4E1 1318 aa14.15□□□□□ -0.15
ACTN4-207ENST00000495553 ADGRL2O95490 1459 aa14.14□□□□□ -0.15
ACTN4-207ENST00000495553 ERBINQ96RT1 1412 aa14.14□□□□□ -0.15
ACTN4-207ENST00000495553 CEBPAP49715 358 aaPredicted RBP14.13□□□□□ -0.15
ACTN4-207ENST00000495553 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.12□□□□□ -0.156e-13■□□□□ 10.7
ACTN4-207ENST00000495553 ANKRD50Q9ULJ7 1429 aa14.11□□□□□ -0.15
ACTN4-207ENST00000495553 ZMYM3Q14202 1370 aa14.1□□□□□ -0.15
ACTN4-207ENST00000495553 HFM1A2PYH4 1435 aa14.1□□□□□ -0.15
ACTN4-207ENST00000495553 RIMS1Q86UR5 1692 aaKnown RBP14.1□□□□□ -0.15
ACTN4-207ENST00000495553 SETD5Q9C0A6 1442 aa14.09□□□□□ -0.15
ACTN4-207ENST00000495553 KANK1Q14678 1352 aa14.09□□□□□ -0.15
ACTN4-207ENST00000495553 FER1L4A9Z1Z3 1794 aa14.08□□□□□ -0.16
ACTN4-207ENST00000495553 EIF2AK4Q9P2K8 1649 aaKnown RBP14.06□□□□□ -0.16
ACTN4-207ENST00000495553 NAIPQ13075 1403 aa14.06□□□□□ -0.16
ACTN4-207ENST00000495553 KDM5DQ9BY66 1539 aa14.05□□□□□ -0.16
ACTN4-207ENST00000495553 HRCP23327 699 aa14.05□□□□□ -0.16
ACTN4-207ENST00000495553 GCC2Q8IWJ2 1684 aa14.04□□□□□ -0.16
ACTN4-207ENST00000495553 FAM135AQ9P2D6 1515 aa14.04□□□□□ -0.16
ACTN4-207ENST00000495553 RNF17Q9BXT8 1623 aaKnown RBP14.03□□□□□ -0.16
ACTN4-207ENST00000495553 RAB3GAP2Q9H2M9 1393 aa14.02□□□□□ -0.17
ACTN4-207ENST00000495553 ABCC3O15438 1527 aa14.01□□□□□ -0.17
ACTN4-207ENST00000495553 NPATQ14207 1427 aa14.01□□□□□ -0.17
ACTN4-207ENST00000495553 FBXO31Q5XUX0 539 aaPredicted RBP14.01□□□□□ -0.17
ACTN4-207ENST00000495553 CLTCQ00610 1675 aaKnown RBP14.01□□□□□ -0.17
ACTN4-207ENST00000495553 PRDM15P57071 1507 aaPredicted RBP14□□□□□ -0.17
ACTN4-207ENST00000495553 UHRF1BP1Q6BDS2 1440 aa13.99□□□□□ -0.17
ACTN4-207ENST00000495553 NUP155O75694 1391 aa13.99□□□□□ -0.17
ACTN4-207ENST00000495553 MROH2AA6NES4 1674 aa13.99□□□□□ -0.17
ACTN4-207ENST00000495553 TRIM52Q96A61 297 aa13.99□□□□□ -0.17
ACTN4-207ENST00000495553 PZPP20742 1482 aa13.99□□□□□ -0.17
ACTN4-207ENST00000495553 TNRQ92752 1358 aa13.98□□□□□ -0.17
ACTN4-207ENST00000495553 MROH1Q8NDA8 1641 aa13.98□□□□□ -0.17
ACTN4-207ENST00000495553 C3P01024 1663 aa13.98□□□□□ -0.17
ACTN4-207ENST00000495553 HSPA2P54652 639 aa13.97□□□□□ -0.17
ACTN4-207ENST00000495553 DEPDC5O75140 1603 aa13.96□□□□□ -0.17
ACTN4-207ENST00000495553 LMTK3Q96Q04 1460 aa13.95□□□□□ -0.18
ACTN4-207ENST00000495553 ARHGAP31Q2M1Z3 1444 aa13.95□□□□□ -0.18
ACTN4-207ENST00000495553 LMTK2Q8IWU2 1503 aa13.95□□□□□ -0.18
ACTN4-207ENST00000495553 ZC3H13Q5T200 1668 aaKnown RBP13.95□□□□□ -0.18
ACTN4-207ENST00000495553 VWDEQ8N2E2 1590 aa13.93□□□□□ -0.18
ACTN4-207ENST00000495553 CCER1Q8TC90 406 aaPredicted RBP13.92□□□□□ -0.18
ACTN4-207ENST00000495553 ERVK-7P63135 1459 aa13.92□□□□□ -0.18
ACTN4-207ENST00000495553 UNC13BO14795 1591 aa13.91□□□□□ -0.18
ACTN4-207ENST00000495553 SETD1BQ9UPS6 1966 aaKnown RBP13.91□□□□□ -0.18
ACTN4-207ENST00000495553 CAMSAP1Q5T5Y3 1602 aa13.9□□□□□ -0.18
ACTN4-207ENST00000495553 SLC4A1APQ9BWU0 796 aaKnown RBP13.9□□□□□ -0.18
ACTN4-207ENST00000495553 CEP152O94986 1710 aa13.9□□□□□ -0.18
ACTN4-207ENST00000495553 PREX1Q8TCU6 1659 aa13.89□□□□□ -0.19
ACTN4-207ENST00000495553 RPRD2Q5VT52 1461 aaKnown RBP13.89□□□□□ -0.19
ACTN4-207ENST00000495553 NLRP1Q9C000 1473 aa13.89□□□□□ -0.19
ACTN4-207ENST00000495553 THEMISQ8N1K5 641 aaPredicted RBP13.89□□□□□ -0.19
ACTN4-207ENST00000495553 STAG3Q9UJ98 1225 aa13.89□□□□□ -0.19
ACTN4-207ENST00000495553 EFCAB6Q5THR3 1501 aa13.89□□□□□ -0.19
ACTN4-207ENST00000495553 A2ML1A8K2U0 1454 aa13.88□□□□□ -0.19
ACTN4-207ENST00000495553 SLC52A1Q9NWF4 448 aa13.88□□□□□ -0.19
ACTN4-207ENST00000495553 SPATA31D1Q6ZQQ2 1576 aa13.88□□□□□ -0.19
ACTN4-207ENST00000495553 PKD2Q13563 968 aa13.87□□□□□ -0.19
ACTN4-207ENST00000495553 MPHOSPH9Q99550 1183 aa13.87□□□□□ -0.19
ACTN4-207ENST00000495553 IDI1Q13907 227 aa13.86□□□□□ -0.19
ACTN4-207ENST00000495553 NOS1P29475 1434 aa13.86□□□□□ -0.19
ACTN4-207ENST00000495553 IQGAP3Q86VI3 1631 aa13.86□□□□□ -0.19
ACTN4-207ENST00000495553 CEP170BQ9Y4F5 1589 aaPredicted RBP13.85□□□□□ -0.19
ACTN4-207ENST00000495553 DMRT2Q9Y5R5 561 aa13.85□□□□□ -0.19
ACTN4-207ENST00000495553 MYO3AQ8NEV4 1616 aa13.85□□□□□ -0.19
ACTN4-207ENST00000495553 CLSPNQ9HAW4 1339 aa13.85□□□□□ -0.19
ACTN4-207ENST00000495553 TET3O43151 1660 aa13.85□□□□□ -0.19
ACTN4-207ENST00000495553 DHX57Q6P158 1386 aaKnown RBP13.83□□□□□ -0.19
ACTN4-207ENST00000495553 CHGAP10645 457 aaKnown RBP13.83□□□□□ -0.2
ACTN4-207ENST00000495553 ANKLE2Q86XL3 938 aa13.83□□□□□ -0.2
ACTN4-207ENST00000495553 NCKAP5LQ9HCH0 1330 aa13.83□□□□□ -0.2
ACTN4-207ENST00000495553 UGGT1Q9NYU2 1555 aa13.83□□□□□ -0.2
ACTN4-207ENST00000495553 EID1Q9Y6B2 187 aa13.8□□□□□ -0.2
ACTN4-207ENST00000495553 PLA2R1Q13018 1463 aa13.8□□□□□ -0.2
ACTN4-207ENST00000495553 FOXD1Q16676 465 aa13.79□□□□□ -0.2
ACTN4-207ENST00000495553 SYNMO15061 1565 aa13.79□□□□□ -0.2
ACTN4-207ENST00000495553 ZNF142P52746 1687 aaPredicted RBP13.79□□□□□ -0.2
ACTN4-207ENST00000495553 TXNDC2Q86VQ3 553 aa13.78□□□□□ -0.2
ACTN4-207ENST00000495553 PTPRTO14522 1441 aa13.78□□□□□ -0.2
ACTN4-207ENST00000495553 E9PCH4 1651 aa13.78□□□□□ -0.2
ACTN4-207ENST00000495553 CFAP65Q6ZU64 1925 aaKnown RBP13.78□□□□□ -0.2
ACTN4-207ENST00000495553 HDGFP51858 240 aaKnown RBP13.77□□□□□ -0.21
ACTN4-207ENST00000495553 TMEM2Q9UHN6 1383 aa13.76□□□□□ -0.21
ACTN4-207ENST00000495553 ZEB1P37275 1124 aaPredicted RBP13.75□□□□□ -0.21
ACTN4-207ENST00000495553 ZNF326Q5BKZ1 582 aaKnown RBP13.75□□□□□ -0.21
ACTN4-207ENST00000495553 PPP1R15AO75807 674 aaPredicted RBP13.74□□□□□ -0.21
ACTN4-207ENST00000495553 LTKP29376 864 aa13.74□□□□□ -0.21
ACTN4-207ENST00000495553 PIK3C2BO00750 1634 aa13.74□□□□□ -0.21
ACTN4-207ENST00000495553 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.73□□□□□ -0.21
ACTN4-207ENST00000495553 BCANQ96GW7 911 aa13.73□□□□□ -0.21
ACTN4-207ENST00000495553 ADGRB3O60242 1522 aa13.73□□□□□ -0.21
ACTN4-207ENST00000495553 TRPM2O94759 1503 aa13.72□□□□□ -0.21
ACTN4-207ENST00000495553 SCAF11Q99590 1463 aaKnown RBP13.72□□□□□ -0.21
ACTN4-207ENST00000495553 CCDC144AA2RUR9 1427 aa13.72□□□□□ -0.21
ACTN4-207ENST00000495553 NPHP4O75161 1426 aaPredicted RBP13.72□□□□□ -0.21
ACTN4-207ENST00000495553 ANKRD30BQ9BXX2 1392 aa13.71□□□□□ -0.21
ACTN4-207ENST00000495553 SLIT1O75093 1534 aa13.71□□□□□ -0.21
ACTN4-207ENST00000495553 UBR1Q8IWV7 1749 aa13.71□□□□□ -0.21
ACTN4-207ENST00000495553 ARHGAP23Q9P227 1491 aa13.71□□□□□ -0.21
ACTN4-207ENST00000495553 NEUROD1Q13562 356 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms