RNA–Protein interactions for RNA: ENST00000493945.5

ACTB-213, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 1,236 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-213ENST00000493945 DEPDC5O75140 1603 aa22.18■■□□□ 1.14
ACTB-213ENST00000493945 UNC13BO14795 1591 aa22.17■■□□□ 1.14
ACTB-213ENST00000493945 ZC3H13Q5T200 1668 aaKnown RBP22.17■■□□□ 1.14
ACTB-213ENST00000493945 PRDM15P57071 1507 aaPredicted RBP22.16■■□□□ 1.14
ACTB-213ENST00000493945 HRCP23327 699 aa22.16■■□□□ 1.14
ACTB-213ENST00000493945 ESF1Q9H501 851 aaKnown RBP22.16■■□□□ 1.14
ACTB-213ENST00000493945 PPP6R1Q9UPN7 881 aa22.16■■□□□ 1.14
ACTB-213ENST00000493945 RAB3GAP2Q9H2M9 1393 aa22.15■■□□□ 1.14
ACTB-213ENST00000493945 KDM5DQ9BY66 1539 aa22.12■■□□□ 1.13
ACTB-213ENST00000493945 GGT6Q6P531 493 aa22.11■■□□□ 1.13
ACTB-213ENST00000493945 CNTLNQ9NXG0 1405 aa22.1■■□□□ 1.13
ACTB-213ENST00000493945 SIGLEC1Q9BZZ2 1709 aa22.09■■□□□ 1.13
ACTB-213ENST00000493945 TRIM52Q96A61 297 aa22.09■■□□□ 1.13
ACTB-213ENST00000493945 FER1L4A9Z1Z3 1794 aa22.09■■□□□ 1.13
ACTB-213ENST00000493945 IQGAP3Q86VI3 1631 aa22.09■■□□□ 1.13
ACTB-213ENST00000493945 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.07■■□□□ 1.122e-37■□□□□ 8.4
ACTB-213ENST00000493945 NUP155O75694 1391 aa22.07■■□□□ 1.12
ACTB-213ENST00000493945 MROH1Q8NDA8 1641 aa22.06■■□□□ 1.12
ACTB-213ENST00000493945 MLECQ14165 292 aa22.06■■□□□ 1.12
ACTB-213ENST00000493945 WASHC2CQ9Y4E1 1318 aa22.06■■□□□ 1.12
ACTB-213ENST00000493945 MROH2AA6NES4 1674 aa22.04■■□□□ 1.12
ACTB-213ENST00000493945 TET3O43151 1660 aa22.04■■□□□ 1.12
ACTB-213ENST00000493945 VWDEQ8N2E2 1590 aa22.04■■□□□ 1.12
ACTB-213ENST00000493945 CEP152O94986 1710 aa22.03■■□□□ 1.12
ACTB-213ENST00000493945 LMTK2Q8IWU2 1503 aa22.03■■□□□ 1.12
ACTB-213ENST00000493945 ABCC3O15438 1527 aa22.02■■□□□ 1.12
ACTB-213ENST00000493945 CLTCQ00610 1675 aaKnown RBP22.01■■□□□ 1.11
ACTB-213ENST00000493945 CAMSAP1Q5T5Y3 1602 aa22.01■■□□□ 1.11
ACTB-213ENST00000493945 ADAMTSL3P82987 1691 aa22.01■■□□□ 1.11
ACTB-213ENST00000493945 MADDQ8WXG6 1647 aa21.98■■□□□ 1.11
ACTB-213ENST00000493945 EFCAB6Q5THR3 1501 aa21.98■■□□□ 1.11
ACTB-213ENST00000493945 RPRD2Q5VT52 1461 aaKnown RBP21.97■■□□□ 1.11
ACTB-213ENST00000493945 SLC4A1APQ9BWU0 796 aaKnown RBP21.97■■□□□ 1.11
ACTB-213ENST00000493945 RIMS1Q86UR5 1692 aaKnown RBP21.96■■□□□ 1.11
ACTB-213ENST00000493945 ARHGAP31Q2M1Z3 1444 aa21.94■■□□□ 1.1
ACTB-213ENST00000493945 PZPP20742 1482 aa21.93■■□□□ 1.1
ACTB-213ENST00000493945 MPHOSPH9Q99550 1183 aa21.9■■□□□ 1.1
ACTB-213ENST00000493945 E9PCH4 1651 aa21.89■■□□□ 1.1
ACTB-213ENST00000493945 C3P01024 1663 aa21.88■■□□□ 1.09
ACTB-213ENST00000493945 ZMYM3Q14202 1370 aa21.88■■□□□ 1.09
ACTB-213ENST00000493945 SPHKAPQ2M3C7 1700 aa21.86■■□□□ 1.09
ACTB-213ENST00000493945 PKD2Q13563 968 aa21.86■■□□□ 1.09
ACTB-213ENST00000493945 NPATQ14207 1427 aa21.86■■□□□ 1.09
ACTB-213ENST00000493945 PREX1Q8TCU6 1659 aa21.85■■□□□ 1.09
ACTB-213ENST00000493945 PTPRMP28827 1452 aa21.83■■□□□ 1.08
ACTB-213ENST00000493945 ERVK-7P63135 1459 aa21.82■■□□□ 1.08
ACTB-213ENST00000493945 CFAP65Q6ZU64 1925 aaKnown RBP21.82■■□□□ 1.08
ACTB-213ENST00000493945 SPATA31D1Q6ZQQ2 1576 aa21.82■■□□□ 1.08
ACTB-213ENST00000493945 DHX57Q6P158 1386 aaKnown RBP21.81■■□□□ 1.08
ACTB-213ENST00000493945 TRPM2O94759 1503 aa21.8■■□□□ 1.08
ACTB-213ENST00000493945 SETD1BQ9UPS6 1966 aaKnown RBP21.79■■□□□ 1.08
ACTB-213ENST00000493945 CLSPNQ9HAW4 1339 aa21.79■■□□□ 1.08
ACTB-213ENST00000493945 TNRQ92752 1358 aa21.77■■□□□ 1.08
ACTB-213ENST00000493945 CCER1Q8TC90 406 aaPredicted RBP21.77■■□□□ 1.08
ACTB-213ENST00000493945 CCDC144AA2RUR9 1427 aa21.77■■□□□ 1.08
ACTB-213ENST00000493945 NOS1P29475 1434 aa21.77■■□□□ 1.08
ACTB-213ENST00000493945 PTPRTO14522 1441 aa21.76■■□□□ 1.07
ACTB-213ENST00000493945 SLC52A1Q9NWF4 448 aa21.75■■□□□ 1.07
ACTB-213ENST00000493945 NLRP1Q9C000 1473 aa21.75■■□□□ 1.07
ACTB-213ENST00000493945 PLPPR3Q6T4P5 718 aa21.74■■□□□ 1.07
ACTB-213ENST00000493945 KIF1BO60333 1816 aa21.72■■□□□ 1.07
ACTB-213ENST00000493945 KDM4FA0A1W2PPD8 638 aa21.72■■□□□ 1.07
ACTB-213ENST00000493945 MYO3AQ8NEV4 1616 aa21.72■■□□□ 1.07
ACTB-213ENST00000493945 SYNMO15061 1565 aa21.71■■□□□ 1.07
ACTB-213ENST00000493945 ANKRD30BQ9BXX2 1392 aa21.7■■□□□ 1.06
ACTB-213ENST00000493945 PIK3C2BO00750 1634 aa21.69■■□□□ 1.06
ACTB-213ENST00000493945 KDM5AP29375 1690 aaKnown RBP21.69■■□□□ 1.06
ACTB-213ENST00000493945 CEBPAP49715 358 aaPredicted RBP21.69■■□□□ 1.06
ACTB-213ENST00000493945 FOXD1Q16676 465 aa21.69■■□□□ 1.06
ACTB-213ENST00000493945 UHRF1BP1Q6BDS2 1440 aa21.69■■□□□ 1.06
ACTB-213ENST00000493945 FBXO31Q5XUX0 539 aaPredicted RBP21.68■■□□□ 1.06
ACTB-213ENST00000493945 STAG3Q9UJ98 1225 aa21.68■■□□□ 1.06
ACTB-213ENST00000493945 ZNF142P52746 1687 aaPredicted RBP21.67■■□□□ 1.06
ACTB-213ENST00000493945 CLTCL1P53675 1640 aa21.66■■□□□ 1.06
ACTB-213ENST00000493945 ADGRB3O60242 1522 aa21.65■■□□□ 1.06
ACTB-213ENST00000493945 NEURL4Q96JN8 1562 aa21.64■■□□□ 1.05
ACTB-213ENST00000493945 CEP170BQ9Y4F5 1589 aaPredicted RBP21.64■■□□□ 1.05
ACTB-213ENST00000493945 A2ML1A8K2U0 1454 aa21.64■■□□□ 1.05
ACTB-213ENST00000493945 PLA2R1Q13018 1463 aa21.64■■□□□ 1.05
ACTB-213ENST00000493945 UGGT1Q9NYU2 1555 aa21.61■■□□□ 1.05
ACTB-213ENST00000493945 CHGAP10645 457 aaKnown RBP21.6■■□□□ 1.05
ACTB-213ENST00000493945 UBR1Q8IWV7 1749 aa21.58■■□□□ 1.05
ACTB-213ENST00000493945 IDI1Q13907 227 aa21.58■■□□□ 1.05
ACTB-213ENST00000493945 HDGFP51858 240 aaKnown RBP21.57■■□□□ 1.04
ACTB-213ENST00000493945 TMEM131LA2VDJ0 1609 aa21.57■■□□□ 1.04
ACTB-213ENST00000493945 THEMISQ8N1K5 641 aaPredicted RBP21.56■■□□□ 1.04
ACTB-213ENST00000493945 TONSLQ96HA7 1378 aa21.56■■□□□ 1.04
ACTB-213ENST00000493945 ZNF326Q5BKZ1 582 aaKnown RBP21.54■■□□□ 1.04
ACTB-213ENST00000493945 AEBP2Q6ZN18 517 aaPredicted RBP21.54■■□□□ 1.04
ACTB-213ENST00000493945 MYO5BQ9ULV0 1848 aa21.53■■□□□ 1.04
ACTB-213ENST00000493945 NEUROD1Q13562 356 aa21.53■■□□□ 1.04
ACTB-213ENST00000493945 TIMELESSQ9UNS1 1208 aa21.53■■□□□ 1.04
ACTB-213ENST00000493945 RPGRIP1LQ68CZ1 1315 aa21.53■■□□□ 1.04
ACTB-213ENST00000493945 STAC3Q96MF2 364 aa21.52■■□□□ 1.04
ACTB-213ENST00000493945 SPATA31E1Q6ZUB1 1445 aa21.51■■□□□ 1.03
ACTB-213ENST00000493945 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.5■■□□□ 1.03
ACTB-213ENST00000493945 EID1Q9Y6B2 187 aa21.49■■□□□ 1.03
ACTB-213ENST00000493945 SIN3AQ96ST3 1273 aa21.48■■□□□ 1.03
ACTB-213ENST00000493945 SLIT1O75093 1534 aa21.48■■□□□ 1.03
ACTB-213ENST00000493945 PPLO60437 1756 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms