RNA–Protein interactions for RNA: ENST00000493786.2

VEGFA-214, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 551 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-214ENST00000493786 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.33□□□□□ -0.61e-15■□□□□ 8.8
VEGFA-214ENST00000493786 PPP6R1Q9UPN7 881 aa11.33□□□□□ -0.6
VEGFA-214ENST00000493786 BCORL1Q5H9F3 1711 aa11.32□□□□□ -0.6
VEGFA-214ENST00000493786 TRIM52Q96A61 297 aa11.31□□□□□ -0.6
VEGFA-214ENST00000493786 SIGLEC1Q9BZZ2 1709 aa11.31□□□□□ -0.6
VEGFA-214ENST00000493786 WASHC2CQ9Y4E1 1318 aa11.31□□□□□ -0.6
VEGFA-214ENST00000493786 RNF17Q9BXT8 1623 aaKnown RBP11.31□□□□□ -0.6
VEGFA-214ENST00000493786 CNTLNQ9NXG0 1405 aa11.3□□□□□ -0.6
VEGFA-214ENST00000493786 FAM135AQ9P2D6 1515 aa11.3□□□□□ -0.6
VEGFA-214ENST00000493786 PCGF6Q9BYE7 350 aa11.29□□□□□ -0.6
VEGFA-214ENST00000493786 PRDM15P57071 1507 aaPredicted RBP11.29□□□□□ -0.6
VEGFA-214ENST00000493786 KDM5DQ9BY66 1539 aa11.29□□□□□ -0.6
VEGFA-214ENST00000493786 NUP155O75694 1391 aa11.28□□□□□ -0.6
VEGFA-214ENST00000493786 RAB3GAP2Q9H2M9 1393 aa11.28□□□□□ -0.6
VEGFA-214ENST00000493786 DEPDC5O75140 1603 aa11.27□□□□□ -0.6
VEGFA-214ENST00000493786 UNC13BO14795 1591 aa11.27□□□□□ -0.61
VEGFA-214ENST00000493786 FER1L4A9Z1Z3 1794 aa11.26□□□□□ -0.61
VEGFA-214ENST00000493786 HRCP23327 699 aa11.26□□□□□ -0.61
VEGFA-214ENST00000493786 MADDQ8WXG6 1647 aa11.26□□□□□ -0.61
VEGFA-214ENST00000493786 ADAMTSL3P82987 1691 aa11.26□□□□□ -0.61
VEGFA-214ENST00000493786 MROH1Q8NDA8 1641 aa11.25□□□□□ -0.61
VEGFA-214ENST00000493786 ZC3H13Q5T200 1668 aaKnown RBP11.25□□□□□ -0.61
VEGFA-214ENST00000493786 ABCC3O15438 1527 aa11.25□□□□□ -0.61
VEGFA-214ENST00000493786 KDM4FA0A1W2PPD8 638 aa11.24□□□□□ -0.61
VEGFA-214ENST00000493786 PLPPR3Q6T4P5 718 aa11.24□□□□□ -0.61
VEGFA-214ENST00000493786 CLTCQ00610 1675 aaKnown RBP11.24□□□□□ -0.61
VEGFA-214ENST00000493786 RIMS1Q86UR5 1692 aaKnown RBP11.24□□□□□ -0.61
VEGFA-214ENST00000493786 SLC4A1APQ9BWU0 796 aaKnown RBP11.23□□□□□ -0.61
VEGFA-214ENST00000493786 ZMYM3Q14202 1370 aa11.23□□□□□ -0.61
VEGFA-214ENST00000493786 LMTK2Q8IWU2 1503 aa11.23□□□□□ -0.61
VEGFA-214ENST00000493786 VWDEQ8N2E2 1590 aa11.23□□□□□ -0.61
VEGFA-214ENST00000493786 MROH2AA6NES4 1674 aa11.22□□□□□ -0.61
VEGFA-214ENST00000493786 IQGAP3Q86VI3 1631 aa11.22□□□□□ -0.61
VEGFA-214ENST00000493786 CEP152O94986 1710 aa11.21□□□□□ -0.61
VEGFA-214ENST00000493786 PTPRMP28827 1452 aa11.21□□□□□ -0.61
VEGFA-214ENST00000493786 CAMSAP1Q5T5Y3 1602 aa11.2□□□□□ -0.62
VEGFA-214ENST00000493786 PZPP20742 1482 aa11.2□□□□□ -0.62
VEGFA-214ENST00000493786 ARHGAP31Q2M1Z3 1444 aa11.2□□□□□ -0.62
VEGFA-214ENST00000493786 CEBPAP49715 358 aaPredicted RBP11.2□□□□□ -0.62
VEGFA-214ENST00000493786 TET3O43151 1660 aa11.2□□□□□ -0.62
VEGFA-214ENST00000493786 EFCAB6Q5THR3 1501 aa11.19□□□□□ -0.62
VEGFA-214ENST00000493786 PKD2Q13563 968 aa11.19□□□□□ -0.62
VEGFA-214ENST00000493786 MPHOSPH9Q99550 1183 aa11.19□□□□□ -0.62
VEGFA-214ENST00000493786 RPRD2Q5VT52 1461 aaKnown RBP11.19□□□□□ -0.62
VEGFA-214ENST00000493786 NPATQ14207 1427 aa11.18□□□□□ -0.62
VEGFA-214ENST00000493786 C3P01024 1663 aa11.17□□□□□ -0.62
VEGFA-214ENST00000493786 TNRQ92752 1358 aa11.16□□□□□ -0.62
VEGFA-214ENST00000493786 FBXO31Q5XUX0 539 aaPredicted RBP11.16□□□□□ -0.62
VEGFA-214ENST00000493786 ERVK-7P63135 1459 aa11.16□□□□□ -0.62
VEGFA-214ENST00000493786 E9PCH4 1651 aa11.14□□□□□ -0.63
VEGFA-214ENST00000493786 SPATA31D1Q6ZQQ2 1576 aa11.13□□□□□ -0.63
VEGFA-214ENST00000493786 FOXD1Q16676 465 aa11.13□□□□□ -0.63
VEGFA-214ENST00000493786 NOS1P29475 1434 aa11.12□□□□□ -0.63
VEGFA-214ENST00000493786 UHRF1BP1Q6BDS2 1440 aa11.12□□□□□ -0.63
VEGFA-214ENST00000493786 PREX1Q8TCU6 1659 aa11.12□□□□□ -0.63
VEGFA-214ENST00000493786 SLC52A1Q9NWF4 448 aa11.12□□□□□ -0.63
VEGFA-214ENST00000493786 STAG3Q9UJ98 1225 aa11.12□□□□□ -0.63
VEGFA-214ENST00000493786 NLRP1Q9C000 1473 aa11.12□□□□□ -0.63
VEGFA-214ENST00000493786 CCDC144AA2RUR9 1427 aa11.1□□□□□ -0.63
VEGFA-214ENST00000493786 PTPRTO14522 1441 aa11.1□□□□□ -0.63
VEGFA-214ENST00000493786 DHX57Q6P158 1386 aaKnown RBP11.1□□□□□ -0.63
VEGFA-214ENST00000493786 TRPM2O94759 1503 aa11.09□□□□□ -0.63
VEGFA-214ENST00000493786 SPHKAPQ2M3C7 1700 aa11.09□□□□□ -0.63
VEGFA-214ENST00000493786 CHGAP10645 457 aaKnown RBP11.09□□□□□ -0.63
VEGFA-214ENST00000493786 CFAP65Q6ZU64 1925 aaKnown RBP11.09□□□□□ -0.63
VEGFA-214ENST00000493786 MYO3AQ8NEV4 1616 aa11.09□□□□□ -0.63
VEGFA-214ENST00000493786 SYNMO15061 1565 aa11.08□□□□□ -0.64
VEGFA-214ENST00000493786 A2ML1A8K2U0 1454 aa11.08□□□□□ -0.64
VEGFA-214ENST00000493786 SETD1BQ9UPS6 1966 aaKnown RBP11.08□□□□□ -0.64
VEGFA-214ENST00000493786 IDI1Q13907 227 aa11.07□□□□□ -0.64
VEGFA-214ENST00000493786 CCER1Q8TC90 406 aaPredicted RBP11.07□□□□□ -0.64
VEGFA-214ENST00000493786 ANKRD30BQ9BXX2 1392 aa11.06□□□□□ -0.64
VEGFA-214ENST00000493786 THEMISQ8N1K5 641 aaPredicted RBP11.06□□□□□ -0.64
VEGFA-214ENST00000493786 UGGT1Q9NYU2 1555 aa11.06□□□□□ -0.64
VEGFA-214ENST00000493786 CEP170BQ9Y4F5 1589 aaPredicted RBP11.06□□□□□ -0.64
VEGFA-214ENST00000493786 PLA2R1Q13018 1463 aa11.06□□□□□ -0.64
VEGFA-214ENST00000493786 ZNF326Q5BKZ1 582 aaKnown RBP11.05□□□□□ -0.64
VEGFA-214ENST00000493786 ZNF142P52746 1687 aaPredicted RBP11.04□□□□□ -0.64
VEGFA-214ENST00000493786 ADGRB3O60242 1522 aa11.04□□□□□ -0.64
VEGFA-214ENST00000493786 PIK3C2BO00750 1634 aa11.04□□□□□ -0.64
VEGFA-214ENST00000493786 CLTCL1P53675 1640 aa11.04□□□□□ -0.64
VEGFA-214ENST00000493786 HDGFP51858 240 aaKnown RBP11.03□□□□□ -0.64
VEGFA-214ENST00000493786 LMTK3Q96Q04 1460 aa11.03□□□□□ -0.64
VEGFA-214ENST00000493786 CLSPNQ9HAW4 1339 aa11.03□□□□□ -0.64
VEGFA-214ENST00000493786 EID1Q9Y6B2 187 aa11.02□□□□□ -0.65
VEGFA-214ENST00000493786 PPP1R15AO75807 674 aaPredicted RBP11.01□□□□□ -0.65
VEGFA-214ENST00000493786 HSPA2P54652 639 aa11.01□□□□□ -0.65
VEGFA-214ENST00000493786 NEUROD1Q13562 356 aa11.01□□□□□ -0.65
VEGFA-214ENST00000493786 KDM5AP29375 1690 aaKnown RBP11.01□□□□□ -0.65
VEGFA-214ENST00000493786 KIF1BO60333 1816 aa11□□□□□ -0.65
VEGFA-214ENST00000493786 RGL3Q3MIN7 710 aa11□□□□□ -0.65
VEGFA-214ENST00000493786 ANKLE2Q86XL3 938 aa11□□□□□ -0.65
VEGFA-214ENST00000493786 ABCF1Q8NE71 845 aaKnown RBP eCLIP11□□□□□ -0.65
VEGFA-214ENST00000493786 UBR1Q8IWV7 1749 aa11□□□□□ -0.65
VEGFA-214ENST00000493786 TMEM2Q9UHN6 1383 aa11□□□□□ -0.65
VEGFA-214ENST00000493786 TMEM131LA2VDJ0 1609 aa10.99□□□□□ -0.65
VEGFA-214ENST00000493786 RPGRIP1LQ68CZ1 1315 aa10.99□□□□□ -0.65
VEGFA-214ENST00000493786 RIMS2Q9UQ26 1411 aa10.99□□□□□ -0.65
VEGFA-214ENST00000493786 TXNDC2Q86VQ3 553 aa10.98□□□□□ -0.65
VEGFA-214ENST00000493786 SIN3AQ96ST3 1273 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms