RNA–Protein interactions for RNA: ENST00000493752.5

ABCD4-216, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 719 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-216ENST00000493752 HRCP23327 699 aa12.16□□□□□ -0.46
ABCD4-216ENST00000493752 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.16□□□□□ -0.46
ABCD4-216ENST00000493752 SETD5Q9C0A6 1442 aa12.15□□□□□ -0.46
ABCD4-216ENST00000493752 KANK1Q14678 1352 aa12.14□□□□□ -0.47
ABCD4-216ENST00000493752 SIGLEC1Q9BZZ2 1709 aa12.14□□□□□ -0.47
ABCD4-216ENST00000493752 CNTLNQ9NXG0 1405 aa12.12□□□□□ -0.47
ABCD4-216ENST00000493752 NUP155O75694 1391 aa12.12□□□□□ -0.47
ABCD4-216ENST00000493752 EIF2AK4Q9P2K8 1649 aaKnown RBP12.11□□□□□ -0.47
ABCD4-216ENST00000493752 ZMYM3Q14202 1370 aa12.11□□□□□ -0.47
ABCD4-216ENST00000493752 TRIM52Q96A61 297 aa12.11□□□□□ -0.47
ABCD4-216ENST00000493752 BCORL1Q5H9F3 1711 aa12.11□□□□□ -0.47
ABCD4-216ENST00000493752 RAB3GAP2Q9H2M9 1393 aa12.09□□□□□ -0.47
ABCD4-216ENST00000493752 PCGF6Q9BYE7 350 aa12.09□□□□□ -0.47
ABCD4-216ENST00000493752 ADAMTSL3P82987 1691 aa12.09□□□□□ -0.47
ABCD4-216ENST00000493752 RNF17Q9BXT8 1623 aaKnown RBP12.08□□□□□ -0.48
ABCD4-216ENST00000493752 FAM135AQ9P2D6 1515 aa12.08□□□□□ -0.48
ABCD4-216ENST00000493752 CEBPAP49715 358 aaPredicted RBP12.08□□□□□ -0.48
ABCD4-216ENST00000493752 KDM5DQ9BY66 1539 aa12.07□□□□□ -0.48
ABCD4-216ENST00000493752 PTPRMP28827 1452 aa12.07□□□□□ -0.48
ABCD4-216ENST00000493752 PRDM15P57071 1507 aaPredicted RBP12.06□□□□□ -0.48
ABCD4-216ENST00000493752 SLC4A1APQ9BWU0 796 aaKnown RBP12.06□□□□□ -0.48
ABCD4-216ENST00000493752 MROH1Q8NDA8 1641 aa12.06□□□□□ -0.48
ABCD4-216ENST00000493752 ABCC3O15438 1527 aa12.06□□□□□ -0.48
ABCD4-216ENST00000493752 VWDEQ8N2E2 1590 aa12.05□□□□□ -0.48
ABCD4-216ENST00000493752 ARHGAP31Q2M1Z3 1444 aa12.05□□□□□ -0.48
ABCD4-216ENST00000493752 DEPDC5O75140 1603 aa12.05□□□□□ -0.48
ABCD4-216ENST00000493752 MPHOSPH9Q99550 1183 aa12.05□□□□□ -0.48
ABCD4-216ENST00000493752 GCC2Q8IWJ2 1684 aa12.05□□□□□ -0.48
ABCD4-216ENST00000493752 LMTK2Q8IWU2 1503 aa12.05□□□□□ -0.48
ABCD4-216ENST00000493752 MADDQ8WXG6 1647 aa12.04□□□□□ -0.48
ABCD4-216ENST00000493752 FBXO31Q5XUX0 539 aaPredicted RBP12.04□□□□□ -0.48
ABCD4-216ENST00000493752 PLPPR3Q6T4P5 718 aa12.04□□□□□ -0.48
ABCD4-216ENST00000493752 PKD2Q13563 968 aa12.03□□□□□ -0.48
ABCD4-216ENST00000493752 UNC13BO14795 1591 aa12.03□□□□□ -0.48
ABCD4-216ENST00000493752 PZPP20742 1482 aa12.02□□□□□ -0.49
ABCD4-216ENST00000493752 NPATQ14207 1427 aa12.01□□□□□ -0.49
ABCD4-216ENST00000493752 RPRD2Q5VT52 1461 aaKnown RBP12□□□□□ -0.49
ABCD4-216ENST00000493752 FER1L4A9Z1Z3 1794 aa12□□□□□ -0.49
ABCD4-216ENST00000493752 IQGAP3Q86VI3 1631 aa11.99□□□□□ -0.49
ABCD4-216ENST00000493752 CLTCQ00610 1675 aaKnown RBP11.99□□□□□ -0.49
ABCD4-216ENST00000493752 ZC3H13Q5T200 1668 aaKnown RBP11.99□□□□□ -0.49
ABCD4-216ENST00000493752 RIMS1Q86UR5 1692 aaKnown RBP11.99□□□□□ -0.49
ABCD4-216ENST00000493752 MROH2AA6NES4 1674 aa11.98□□□□□ -0.49
ABCD4-216ENST00000493752 TNRQ92752 1358 aa11.98□□□□□ -0.49
ABCD4-216ENST00000493752 SLC52A1Q9NWF4 448 aa11.98□□□□□ -0.49
ABCD4-216ENST00000493752 EFCAB6Q5THR3 1501 aa11.96□□□□□ -0.49
ABCD4-216ENST00000493752 NOS1P29475 1434 aa11.96□□□□□ -0.49
ABCD4-216ENST00000493752 FOXD1Q16676 465 aa11.96□□□□□ -0.49
ABCD4-216ENST00000493752 ERVK-7P63135 1459 aa11.95□□□□□ -0.5
ABCD4-216ENST00000493752 PTPRTO14522 1441 aa11.95□□□□□ -0.5
ABCD4-216ENST00000493752 TET3O43151 1660 aa11.95□□□□□ -0.5
ABCD4-216ENST00000493752 IDI1Q13907 227 aa11.95□□□□□ -0.5
ABCD4-216ENST00000493752 CAMSAP1Q5T5Y3 1602 aa11.95□□□□□ -0.5
ABCD4-216ENST00000493752 C3P01024 1663 aa11.94□□□□□ -0.5
ABCD4-216ENST00000493752 CEP152O94986 1710 aa11.94□□□□□ -0.5
ABCD4-216ENST00000493752 SPATA31D1Q6ZQQ2 1576 aa11.93□□□□□ -0.5
ABCD4-216ENST00000493752 SENP3Q9H4L4 574 aaPredicted RBP11.93□□□□□ -0.5
ABCD4-216ENST00000493752 PLA2R1Q13018 1463 aa11.92□□□□□ -0.5
ABCD4-216ENST00000493752 NLRP1Q9C000 1473 aa11.92□□□□□ -0.5
ABCD4-216ENST00000493752 THEMISQ8N1K5 641 aaPredicted RBP11.92□□□□□ -0.5
ABCD4-216ENST00000493752 UHRF1BP1Q6BDS2 1440 aa11.92□□□□□ -0.5
ABCD4-216ENST00000493752 STAG3Q9UJ98 1225 aa11.91□□□□□ -0.5
ABCD4-216ENST00000493752 ANKRD30BQ9BXX2 1392 aa11.91□□□□□ -0.5
ABCD4-216ENST00000493752 SETD1BQ9UPS6 1966 aaKnown RBP11.9□□□□□ -0.5
ABCD4-216ENST00000493752 E9PCH4 1651 aa11.9□□□□□ -0.5
ABCD4-216ENST00000493752 DHX57Q6P158 1386 aaKnown RBP11.9□□□□□ -0.5
ABCD4-216ENST00000493752 A2ML1A8K2U0 1454 aa11.89□□□□□ -0.51
ABCD4-216ENST00000493752 PREX1Q8TCU6 1659 aa11.87□□□□□ -0.51
ABCD4-216ENST00000493752 CCDC144AA2RUR9 1427 aa11.87□□□□□ -0.51
ABCD4-216ENST00000493752 CHGAP10645 457 aaKnown RBP11.87□□□□□ -0.51
ABCD4-216ENST00000493752 HSPA2P54652 639 aa11.87□□□□□ -0.51
ABCD4-216ENST00000493752 SYNMO15061 1565 aa11.87□□□□□ -0.51
ABCD4-216ENST00000493752 TRPM2O94759 1503 aa11.86□□□□□ -0.51
ABCD4-216ENST00000493752 HDGFP51858 240 aaKnown RBP11.86□□□□□ -0.51
ABCD4-216ENST00000493752 LMTK3Q96Q04 1460 aa11.86□□□□□ -0.51
ABCD4-216ENST00000493752 ANKLE2Q86XL3 938 aa11.85□□□□□ -0.51
ABCD4-216ENST00000493752 UGGT1Q9NYU2 1555 aa11.84□□□□□ -0.51
ABCD4-216ENST00000493752 RPGRIP1LQ68CZ1 1315 aa11.84□□□□□ -0.51
ABCD4-216ENST00000493752 CEP170BQ9Y4F5 1589 aaPredicted RBP11.84□□□□□ -0.51
ABCD4-216ENST00000493752 TMEM2Q9UHN6 1383 aa11.83□□□□□ -0.52
ABCD4-216ENST00000493752 ZNF326Q5BKZ1 582 aaKnown RBP11.83□□□□□ -0.52
ABCD4-216ENST00000493752 TXNDC2Q86VQ3 553 aa11.83□□□□□ -0.52
ABCD4-216ENST00000493752 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.83□□□□□ -0.52
ABCD4-216ENST00000493752 EID1Q9Y6B2 187 aa11.83□□□□□ -0.52
ABCD4-216ENST00000493752 CFAP65Q6ZU64 1925 aaKnown RBP11.83□□□□□ -0.52
ABCD4-216ENST00000493752 CLSPNQ9HAW4 1339 aa11.83□□□□□ -0.52
ABCD4-216ENST00000493752 MYO3AQ8NEV4 1616 aa11.82□□□□□ -0.52
ABCD4-216ENST00000493752 RGL3Q3MIN7 710 aa11.82□□□□□ -0.52
ABCD4-216ENST00000493752 CCER1Q8TC90 406 aaPredicted RBP11.82□□□□□ -0.52
ABCD4-216ENST00000493752 SIN3AQ96ST3 1273 aa11.82□□□□□ -0.52
ABCD4-216ENST00000493752 PIK3C2BO00750 1634 aa11.82□□□□□ -0.52
ABCD4-216ENST00000493752 SPHKAPQ2M3C7 1700 aa11.81□□□□□ -0.52
ABCD4-216ENST00000493752 LTKP29376 864 aa11.81□□□□□ -0.52
ABCD4-216ENST00000493752 DMRT2Q9Y5R5 561 aa11.81□□□□□ -0.52
ABCD4-216ENST00000493752 SPATA31E1Q6ZUB1 1445 aa11.8□□□□□ -0.52
ABCD4-216ENST00000493752 VGFO15240 615 aaPredicted RBP11.8□□□□□ -0.52
ABCD4-216ENST00000493752 NEUROD1Q13562 356 aa11.8□□□□□ -0.52
ABCD4-216ENST00000493752 STAC3Q96MF2 364 aa11.8□□□□□ -0.52
ABCD4-216ENST00000493752 NCKAP5LQ9HCH0 1330 aa11.8□□□□□ -0.52
ABCD4-216ENST00000493752 ARHGAP23Q9P227 1491 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 130 ms