RNA–Protein interactions for RNA: ENST00000493518.5

CACUL1-206, Transcript of CDK2 associated cullin domain 1, humanhuman

TSL 1 (best)

Gene CACUL1, Length 3,217 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACUL1-206ENST00000493518 RNF123Q5XPI4 1314 aa20.58■□□□□ 0.89
CACUL1-206ENST00000493518 ADAMTS8Q9UP79 889 aa20.58■□□□□ 0.88
CACUL1-206ENST00000493518 TARBP1Q13395 1621 aaKnown RBP20.57■□□□□ 0.88
CACUL1-206ENST00000493518 DNMT1P26358 1616 aaKnown RBP20.56■□□□□ 0.88
CACUL1-206ENST00000493518 C9orf84Q5VXU9 1444 aa20.56■□□□□ 0.88
CACUL1-206ENST00000493518 TCERG1O14776 1098 aaKnown RBP20.55■□□□□ 0.88
CACUL1-206ENST00000493518 WDR43Q15061 677 aaKnown RBP eCLIP20.55■□□□□ 0.88
CACUL1-206ENST00000493518 BRD4O60885 1362 aaPredicted RBP20.54■□□□□ 0.88
CACUL1-206ENST00000493518 KIF14Q15058 1648 aa20.54■□□□□ 0.88
CACUL1-206ENST00000493518 NEUROD2Q15784 382 aa20.53■□□□□ 0.88
CACUL1-206ENST00000493518 BACH2Q9BYV9 841 aa20.53■□□□□ 0.88
CACUL1-206ENST00000493518 KIAA0586Q9BVV6 1533 aa20.53■□□□□ 0.88
CACUL1-206ENST00000493518 TNNT2P45379 298 aaPredicted RBP20.53■□□□□ 0.88
CACUL1-206ENST00000493518 ADAMTS12P58397 1594 aa20.52■□□□□ 0.88
CACUL1-206ENST00000493518 DISP3Q9P2K9 1392 aa20.51■□□□□ 0.87
CACUL1-206ENST00000493518 ANO8Q9HCE9 1232 aaPredicted RBP20.51■□□□□ 0.87
CACUL1-206ENST00000493518 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.51■□□□□ 0.87
CACUL1-206ENST00000493518 KNSTRNQ9Y448 316 aa20.5■□□□□ 0.87
CACUL1-206ENST00000493518 CCDC144AA2RUR9 1427 aa20.5■□□□□ 0.87
CACUL1-206ENST00000493518 PBRM1Q86U86 1689 aa20.49■□□□□ 0.87
CACUL1-206ENST00000493518 TMF1P82094 1093 aa20.48■□□□□ 0.87
CACUL1-206ENST00000493518 KIAA0556O60303 1618 aa20.48■□□□□ 0.87
CACUL1-206ENST00000493518 ARXQ96QS3 562 aa20.48■□□□□ 0.87
CACUL1-206ENST00000493518 RAPGEF6Q8TEU7 1601 aa20.48■□□□□ 0.87
CACUL1-206ENST00000493518 PER1O15534 1290 aaPredicted RBP20.48■□□□□ 0.87
CACUL1-206ENST00000493518 GRIN2AQ12879 1464 aa20.46■□□□□ 0.87
CACUL1-206ENST00000493518 LRPPRCP42704 1394 aaKnown RBP20.46■□□□□ 0.87
CACUL1-206ENST00000493518 ARID4BQ4LE39 1312 aaPredicted RBP20.46■□□□□ 0.87
CACUL1-206ENST00000493518 ERCC6Q03468 1493 aa20.46■□□□□ 0.87
CACUL1-206ENST00000493518 MRC2Q9UBG0 1479 aa20.46■□□□□ 0.87
CACUL1-206ENST00000493518 KDM5CP41229 1560 aa20.44■□□□□ 0.86
CACUL1-206ENST00000493518 MBD5Q9P267 1494 aa20.44■□□□□ 0.86
CACUL1-206ENST00000493518 CARMIL2Q6F5E8 1435 aa20.44■□□□□ 0.86
CACUL1-206ENST00000493518 RALGAPBQ86X10 1494 aa20.43■□□□□ 0.86
CACUL1-206ENST00000493518 CANXP27824 592 aaKnown RBP20.42■□□□□ 0.86
CACUL1-206ENST00000493518 PDE3BQ13370 1112 aa20.41■□□□□ 0.86
CACUL1-206ENST00000493518 TESK2Q96S53 571 aa20.41■□□□□ 0.86
CACUL1-206ENST00000493518 APAF1O14727 1248 aa20.4■□□□□ 0.86
CACUL1-206ENST00000493518 CHGAP10645 457 aaKnown RBP20.4■□□□□ 0.86
CACUL1-206ENST00000493518 BRPF3Q9ULD4 1205 aa20.4■□□□□ 0.86
CACUL1-206ENST00000493518 BCAR3O75815 825 aa20.4■□□□□ 0.86
CACUL1-206ENST00000493518 FRAT1Q92837 279 aaPredicted RBP20.4■□□□□ 0.86
CACUL1-206ENST00000493518 RRP7AQ9Y3A4 280 aaKnown RBP20.38■□□□□ 0.85
CACUL1-206ENST00000493518 PPP2R1AP30153 589 aa20.37■□□□□ 0.85
CACUL1-206ENST00000493518 PARD3Q8TEW0 1356 aa20.36■□□□□ 0.85
CACUL1-206ENST00000493518 SPINK5Q9NQ38 1064 aaPredicted RBP20.36■□□□□ 0.85
CACUL1-206ENST00000493518 BCL2L13Q9BXK5 485 aa20.36■□□□□ 0.85
CACUL1-206ENST00000493518 IFT140Q96RY7 1462 aa20.35■□□□□ 0.85
CACUL1-206ENST00000493518 GOLGA2Q08379 1002 aa20.35■□□□□ 0.85
CACUL1-206ENST00000493518 ATP10BO94823 1461 aa20.35■□□□□ 0.85
CACUL1-206ENST00000493518 MAGI1Q96QZ7 1491 aaPredicted RBP20.35■□□□□ 0.85
CACUL1-206ENST00000493518 NFKBIBQ15653 356 aa20.34■□□□□ 0.85
CACUL1-206ENST00000493518 PLEKHH1Q9ULM0 1364 aa20.33■□□□□ 0.84
CACUL1-206ENST00000493518 PPM1GO15355 546 aaPredicted RBP20.32■□□□□ 0.84
CACUL1-206ENST00000493518 PTPRGP23470 1445 aa20.32■□□□□ 0.84
CACUL1-206ENST00000493518 UHRF1BP1Q6BDS2 1440 aa20.32■□□□□ 0.84
CACUL1-206ENST00000493518 SPRYD3Q8NCJ5 442 aa20.32■□□□□ 0.84
CACUL1-206ENST00000493518 MS4A1P11836 297 aa20.31■□□□□ 0.84
CACUL1-206ENST00000493518 PRAG1Q86YV5 1406 aa20.31■□□□□ 0.84
CACUL1-206ENST00000493518 DUSP27Q5VZP5 1158 aa20.31■□□□□ 0.84
CACUL1-206ENST00000493518 ERBINQ96RT1 1412 aa20.3■□□□□ 0.84
CACUL1-206ENST00000493518 CLUAP1Q96AJ1 413 aa20.3■□□□□ 0.84
CACUL1-206ENST00000493518 SLKQ9H2G2 1235 aaPredicted RBP20.3■□□□□ 0.84
CACUL1-206ENST00000493518 DMRT2Q9Y5R5 561 aa20.3■□□□□ 0.84
CACUL1-206ENST00000493518 AFAP1Q8N556 730 aa20.3■□□□□ 0.84
CACUL1-206ENST00000493518 FRAT2O75474 233 aaPredicted RBP20.29■□□□□ 0.84
CACUL1-206ENST00000493518 COG6Q9Y2V7 657 aa20.29■□□□□ 0.84
CACUL1-206ENST00000493518 EIF5BO60841 1220 aaKnown RBP20.29■□□□□ 0.84
CACUL1-206ENST00000493518 PANK1Q8TE04 598 aa20.29■□□□□ 0.84
CACUL1-206ENST00000493518 PLEKHH2Q8IVE3 1493 aa20.29■□□□□ 0.84
CACUL1-206ENST00000493518 DDRGK1Q96HY6 314 aa20.29■□□□□ 0.84
CACUL1-206ENST00000493518 ADGRL2O95490 1459 aa20.27■□□□□ 0.84
CACUL1-206ENST00000493518 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.27■□□□□ 0.83
CACUL1-206ENST00000493518 NUTM2DQ5VT03 806 aaPredicted RBP20.26■□□□□ 0.83
CACUL1-206ENST00000493518 FAM135AQ9P2D6 1515 aa20.25■□□□□ 0.83
CACUL1-206ENST00000493518 CEP170Q5SW79 1584 aa20.25■□□□□ 0.83
CACUL1-206ENST00000493518 FAM161AQ3B820 660 aa20.24■□□□□ 0.83
CACUL1-206ENST00000493518 CFAP70Q5T0N1 1121 aa20.24■□□□□ 0.83
CACUL1-206ENST00000493518 EIF4G3O43432 1585 aaKnown RBP20.24■□□□□ 0.83
CACUL1-206ENST00000493518 A2MP01023 1474 aa20.24■□□□□ 0.83
CACUL1-206ENST00000493518 CENPQQ7L2Z9 268 aaPredicted RBP20.24■□□□□ 0.83
CACUL1-206ENST00000493518 GSE1Q14687 1217 aa20.23■□□□□ 0.83
CACUL1-206ENST00000493518 POLR1AO95602 1720 aaPredicted RBP20.22■□□□□ 0.83
CACUL1-206ENST00000493518 IGHDP01880 384 aa20.22■□□□□ 0.83
CACUL1-206ENST00000493518 SAFB2Q14151 953 aaKnown RBP eCLIP20.22■□□□□ 0.83
CACUL1-206ENST00000493518 ITSN2Q9NZM3 1697 aa20.21■□□□□ 0.83
CACUL1-206ENST00000493518 TNNQ9UQP3 1299 aa20.21■□□□□ 0.83
CACUL1-206ENST00000493518 PLA2R1Q13018 1463 aa20.21■□□□□ 0.83
CACUL1-206ENST00000493518 C8orf34Q49A92 452 aa20.21■□□□□ 0.83
CACUL1-206ENST00000493518 AMER1Q5JTC6 1135 aaPredicted RBP20.21■□□□□ 0.83
CACUL1-206ENST00000493518 ARHGAP5Q13017 1502 aa20.2■□□□□ 0.82
CACUL1-206ENST00000493518 SYNJ2O15056 1496 aa20.19■□□□□ 0.82
CACUL1-206ENST00000493518 ADGBQ8N7X0 1667 aa20.19■□□□□ 0.82
CACUL1-206ENST00000493518 SEC24BO95487 1268 aa20.19■□□□□ 0.82
CACUL1-206ENST00000493518 CCDC141Q6ZP82 1450 aa20.18■□□□□ 0.82
CACUL1-206ENST00000493518 KIF3BO15066 747 aa20.18■□□□□ 0.82
CACUL1-206ENST00000493518 SLFN5Q08AF3 891 aa20.17■□□□□ 0.82
CACUL1-206ENST00000493518 TRAK1Q9UPV9 953 aa20.17■□□□□ 0.82
CACUL1-206ENST00000493518 ABCC10Q5T3U5 1492 aa20.17■□□□□ 0.82
CACUL1-206ENST00000493518 SYCP2Q9BX26 1530 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms