RNA–Protein interactions for RNA: ENST00000493389.1

PMM1-209, Transcript of phosphomannomutase 1, humanhuman

TSL 3

Gene PMM1, Length 866 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMM1-209ENST00000493389 PTPRKQ15262 1439 aa27.43■■□□□ 1.98
PMM1-209ENST00000493389 NCOA1Q15788 1441 aa27.42■■□□□ 1.98
PMM1-209ENST00000493389 MROH2AA6NES4 1674 aa27.41■■□□□ 1.98
PMM1-209ENST00000493389 WASHC2CQ9Y4E1 1318 aa27.41■■□□□ 1.98
PMM1-209ENST00000493389 ADGRL2O95490 1459 aa27.39■■□□□ 1.98
PMM1-209ENST00000493389 KDM5DQ9BY66 1539 aa27.39■■□□□ 1.98
PMM1-209ENST00000493389 ERBINQ96RT1 1412 aa27.39■■□□□ 1.97
PMM1-209ENST00000493389 RNF17Q9BXT8 1623 aaKnown RBP27.38■■□□□ 1.97
PMM1-209ENST00000493389 EIF2AK4Q9P2K8 1649 aaKnown RBP27.38■■□□□ 1.97
PMM1-209ENST00000493389 NPATQ14207 1427 aa27.37■■□□□ 1.97
PMM1-209ENST00000493389 UHRF1BP1Q6BDS2 1440 aa27.37■■□□□ 1.97
PMM1-209ENST00000493389 ITGAEP38570 1179 aa27.36■■□□□ 1.97
PMM1-209ENST00000493389 MROH1Q8NDA8 1641 aa27.35■■□□□ 1.97
PMM1-209ENST00000493389 PREX1Q8TCU6 1659 aa27.34■■□□□ 1.97
PMM1-209ENST00000493389 FAM135AQ9P2D6 1515 aa27.34■■□□□ 1.97
PMM1-209ENST00000493389 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.34■■□□□ 1.97
PMM1-209ENST00000493389 ABCC3O15438 1527 aa27.32■■□□□ 1.96
PMM1-209ENST00000493389 FBXO31Q5XUX0 539 aaPredicted RBP27.32■■□□□ 1.96
PMM1-209ENST00000493389 RRBP1Q9P2E9 1410 aaKnown RBP27.32■■□□□ 1.96
PMM1-209ENST00000493389 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.3■■□□□ 1.96
PMM1-209ENST00000493389 PZPP20742 1482 aa27.29■■□□□ 1.96
PMM1-209ENST00000493389 PRDM15P57071 1507 aaPredicted RBP27.26■■□□□ 1.96
PMM1-209ENST00000493389 ANKRD50Q9ULJ7 1429 aa27.26■■□□□ 1.95
PMM1-209ENST00000493389 ROCK1Q13464 1354 aa27.26■■□□□ 1.95
PMM1-209ENST00000493389 SETD1BQ9UPS6 1966 aaKnown RBP27.23■■□□□ 1.95
PMM1-209ENST00000493389 TNRQ92752 1358 aa27.22■■□□□ 1.95
PMM1-209ENST00000493389 DEPDC5O75140 1603 aa27.21■■□□□ 1.95
PMM1-209ENST00000493389 ZC3H13Q5T200 1668 aaKnown RBP27.21■■□□□ 1.95
PMM1-209ENST00000493389 MYO3AQ8NEV4 1616 aa27.19■■□□□ 1.94
PMM1-209ENST00000493389 KANK1Q14678 1352 aa27.19■■□□□ 1.94
PMM1-209ENST00000493389 CEP152O94986 1710 aa27.18■■□□□ 1.94
PMM1-209ENST00000493389 VWDEQ8N2E2 1590 aa27.16■■□□□ 1.94
PMM1-209ENST00000493389 CAMSAP1Q5T5Y3 1602 aa27.16■■□□□ 1.94
PMM1-209ENST00000493389 CEP170BQ9Y4F5 1589 aaPredicted RBP27.15■■□□□ 1.94
PMM1-209ENST00000493389 ERVK-7P63135 1459 aa27.14■■□□□ 1.94
PMM1-209ENST00000493389 A2ML1A8K2U0 1454 aa27.13■■□□□ 1.93
PMM1-209ENST00000493389 ARHGAP31Q2M1Z3 1444 aa27.13■■□□□ 1.93
PMM1-209ENST00000493389 LMTK2Q8IWU2 1503 aa27.12■■□□□ 1.93
PMM1-209ENST00000493389 SPATA31D1Q6ZQQ2 1576 aa27.12■■□□□ 1.93
PMM1-209ENST00000493389 ZNF142P52746 1687 aaPredicted RBP27.11■■□□□ 1.93
PMM1-209ENST00000493389 STRCQ7RTU9 1775 aa27.07■■□□□ 1.92
PMM1-209ENST00000493389 NLRP1Q9C000 1473 aa27.06■■□□□ 1.92
PMM1-209ENST00000493389 NCKAP5LQ9HCH0 1330 aa27.06■■□□□ 1.92
PMM1-209ENST00000493389 UNC13BO14795 1591 aa27.05■■□□□ 1.92
PMM1-209ENST00000493389 EFCAB6Q5THR3 1501 aa27.04■■□□□ 1.92
PMM1-209ENST00000493389 NAIPQ13075 1403 aa27.03■■□□□ 1.92
PMM1-209ENST00000493389 PLA2R1Q13018 1463 aa27.02■■□□□ 1.92
PMM1-209ENST00000493389 DMRT2Q9Y5R5 561 aa27.02■■□□□ 1.92
PMM1-209ENST00000493389 NUP155O75694 1391 aa27■■□□□ 1.91
PMM1-209ENST00000493389 UGGT1Q9NYU2 1555 aa26.99■■□□□ 1.91
PMM1-209ENST00000493389 PTPRTO14522 1441 aa26.99■■□□□ 1.91
PMM1-209ENST00000493389 PKD2Q13563 968 aa26.97■■□□□ 1.91
PMM1-209ENST00000493389 THEMISQ8N1K5 641 aaPredicted RBP26.97■■□□□ 1.91
PMM1-209ENST00000493389 HFM1A2PYH4 1435 aa26.97■■□□□ 1.91
PMM1-209ENST00000493389 NOS1P29475 1434 aa26.97■■□□□ 1.91
PMM1-209ENST00000493389 TET3O43151 1660 aa26.93■■□□□ 1.9
PMM1-209ENST00000493389 IQGAP3Q86VI3 1631 aa26.93■■□□□ 1.9
PMM1-209ENST00000493389 RPRD2Q5VT52 1461 aaKnown RBP26.93■■□□□ 1.9
PMM1-209ENST00000493389 SYNMO15061 1565 aa26.92■■□□□ 1.9
PMM1-209ENST00000493389 CFAP65Q6ZU64 1925 aaKnown RBP26.92■■□□□ 1.9
PMM1-209ENST00000493389 IDI1Q13907 227 aa26.92■■□□□ 1.9
PMM1-209ENST00000493389 GCC2Q8IWJ2 1684 aa26.89■■□□□ 1.9
PMM1-209ENST00000493389 ANKLE2Q86XL3 938 aa26.89■■□□□ 1.9
PMM1-209ENST00000493389 NEURL4Q96JN8 1562 aa26.86■■□□□ 1.89
PMM1-209ENST00000493389 PIK3C2BO00750 1634 aa26.86■■□□□ 1.89
PMM1-209ENST00000493389 UBR1Q8IWV7 1749 aa26.85■■□□□ 1.89
PMM1-209ENST00000493389 SLC52A1Q9NWF4 448 aa26.84■■□□□ 1.89
PMM1-209ENST00000493389 STAG3Q9UJ98 1225 aa26.84■■□□□ 1.89
PMM1-209ENST00000493389 E9PCH4 1651 aa26.84■■□□□ 1.89
PMM1-209ENST00000493389 TRIM52Q96A61 297 aa26.82■■□□□ 1.88
PMM1-209ENST00000493389 ARHGAP23Q9P227 1491 aa26.81■■□□□ 1.88
PMM1-209ENST00000493389 LTKP29376 864 aa26.8■■□□□ 1.88
PMM1-209ENST00000493389 CERKQ8TCT0 537 aa26.8■■□□□ 1.88
PMM1-209ENST00000493389 ZNF335Q9H4Z2 1342 aaPredicted RBP26.8■■□□□ 1.88
PMM1-209ENST00000493389 NPHP4O75161 1426 aaPredicted RBP26.8■■□□□ 1.88
PMM1-209ENST00000493389 TMEM2Q9UHN6 1383 aa26.79■■□□□ 1.88
PMM1-209ENST00000493389 SLIT1O75093 1534 aa26.79■■□□□ 1.88
PMM1-209ENST00000493389 ILDR1Q86SU0 546 aaPredicted RBP26.78■■□□□ 1.88
PMM1-209ENST00000493389 TXNDC2Q86VQ3 553 aa26.78■■□□□ 1.88
PMM1-209ENST00000493389 MED14O60244 1454 aa26.78■■□□□ 1.88
PMM1-209ENST00000493389 ADGRB3O60242 1522 aa26.78■■□□□ 1.88
PMM1-209ENST00000493389 POLR1AO95602 1720 aaPredicted RBP26.77■■□□□ 1.88
PMM1-209ENST00000493389 SCAF11Q99590 1463 aaKnown RBP26.76■■□□□ 1.87
PMM1-209ENST00000493389 LTBP4Q8N2S1 1624 aa26.76■■□□□ 1.87
PMM1-209ENST00000493389 CHGAP10645 457 aaKnown RBP26.72■■□□□ 1.87
PMM1-209ENST00000493389 EID1Q9Y6B2 187 aa26.72■■□□□ 1.87
PMM1-209ENST00000493389 SLC4A1APQ9BWU0 796 aaKnown RBP26.71■■□□□ 1.87
PMM1-209ENST00000493389 KDM5AP29375 1690 aaKnown RBP26.7■■□□□ 1.87
PMM1-209ENST00000493389 SETD5Q9C0A6 1442 aa26.7■■□□□ 1.86
PMM1-209ENST00000493389 FBXO41Q8TF61 875 aa26.69■■□□□ 1.86
PMM1-209ENST00000493389 IQGAP1P46940 1657 aa26.67■■□□□ 1.86
PMM1-209ENST00000493389 TMEM131LA2VDJ0 1609 aa26.67■■□□□ 1.86
PMM1-209ENST00000493389 FOXD1Q16676 465 aa26.65■■□□□ 1.86
PMM1-209ENST00000493389 ZFYVE9O95405 1425 aa26.65■■□□□ 1.86
PMM1-209ENST00000493389 RIMS2Q9UQ26 1411 aa26.64■■□□□ 1.85
PMM1-209ENST00000493389 RAB3GAP2Q9H2M9 1393 aa26.63■■□□□ 1.85
PMM1-209ENST00000493389 SENP3Q9H4L4 574 aaPredicted RBP26.62■■□□□ 1.85
PMM1-209ENST00000493389 SPHKAPQ2M3C7 1700 aa26.62■■□□□ 1.85
PMM1-209ENST00000493389 TRPM2O94759 1503 aa26.61■■□□□ 1.85
PMM1-209ENST00000493389 MPHOSPH9Q99550 1183 aa26.61■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms