RNA–Protein interactions for RNA: ENST00000493339.1

PTK7-218, Transcript of protein tyrosine kinase 7 (inactive), humanhuman

TSL 2

Gene PTK7, Length 2,987 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK7-218ENST00000493339 NAP1L5Q96NT1 182 aaPredicted RBP17.13■□□□□ 0.33
PTK7-218ENST00000493339 CUL7Q14999 1698 aa17.13■□□□□ 0.33
PTK7-218ENST00000493339 ABCC5O15440 1437 aa17.13■□□□□ 0.33
PTK7-218ENST00000493339 ROCK1Q13464 1354 aa17.12■□□□□ 0.33
PTK7-218ENST00000493339 CDK13Q14004 1512 aaKnown RBP17.12■□□□□ 0.33
PTK7-218ENST00000493339 CC2D2AQ9P2K1 1620 aa17.12■□□□□ 0.33
PTK7-218ENST00000493339 TDRD9Q8NDG6 1382 aaKnown RBP17.12■□□□□ 0.33
PTK7-218ENST00000493339 FANCD2Q9BXW9 1451 aa17.12■□□□□ 0.33
PTK7-218ENST00000493339 PZPP20742 1482 aa17.11■□□□□ 0.33
PTK7-218ENST00000493339 EPRSP07814 1512 aaKnown RBP17.09■□□□□ 0.33
PTK7-218ENST00000493339 PARD3Q8TEW0 1356 aa17.08■□□□□ 0.33
PTK7-218ENST00000493339 KIF14Q15058 1648 aa17.08■□□□□ 0.33
PTK7-218ENST00000493339 KIAA1107Q9UPP5 1409 aa17.08■□□□□ 0.32
PTK7-218ENST00000493339 ZMYND15Q9H091 742 aa17.07■□□□□ 0.32
PTK7-218ENST00000493339 L1TD1Q5T7N2 865 aaKnown RBP17.07■□□□□ 0.32
PTK7-218ENST00000493339 PNNQ9H307 717 aaKnown RBP17.05■□□□□ 0.32
PTK7-218ENST00000493339 ZNF777Q9ULD5 760 aaPredicted RBP17.05■□□□□ 0.32
PTK7-218ENST00000493339 TOPBP1Q92547 1522 aa17.05■□□□□ 0.32
PTK7-218ENST00000493339 RALGAPBQ86X10 1494 aa17.05■□□□□ 0.32
PTK7-218ENST00000493339 HOMEZQ8IX15 550 aa17.04■□□□□ 0.32
PTK7-218ENST00000493339 GZF1Q9H116 711 aaPredicted RBP17.04■□□□□ 0.32
PTK7-218ENST00000493339 ADAMTS8Q9UP79 889 aa17.04■□□□□ 0.32
PTK7-218ENST00000493339 SEC24BO95487 1268 aa17.03■□□□□ 0.32
PTK7-218ENST00000493339 HSP90AA2PQ14568 343 aaPredicted RBP17.03■□□□□ 0.32
PTK7-218ENST00000493339 DNMBPQ6XZF7 1577 aa17.03■□□□□ 0.32
PTK7-218ENST00000493339 PER1O15534 1290 aaPredicted RBP17.02■□□□□ 0.32
PTK7-218ENST00000493339 NESP48681 1621 aa17.02■□□□□ 0.32
PTK7-218ENST00000493339 BECN1Q14457 450 aa17.02■□□□□ 0.31
PTK7-218ENST00000493339 TPRNQ4KMQ1 711 aa17.01■□□□□ 0.31
PTK7-218ENST00000493339 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.01■□□□□ 0.31
PTK7-218ENST00000493339 USP19O94966 1318 aa17.01■□□□□ 0.31
PTK7-218ENST00000493339 DUSP27Q5VZP5 1158 aa17.01■□□□□ 0.31
PTK7-218ENST00000493339 PANK2Q9BZ23 570 aa17.01■□□□□ 0.31
PTK7-218ENST00000493339 BLMP54132 1417 aaPredicted RBP17■□□□□ 0.31
PTK7-218ENST00000493339 HSP90AA1P07900 732 aaKnown RBP17■□□□□ 0.31
PTK7-218ENST00000493339 XRCC6P12956 609 aaKnown RBP eCLIP17■□□□□ 0.31
PTK7-218ENST00000493339 SPRYD3Q8NCJ5 442 aa17■□□□□ 0.31
PTK7-218ENST00000493339 UHRF1BP1Q6BDS2 1440 aa16.99■□□□□ 0.31
PTK7-218ENST00000493339 DNMT1P26358 1616 aaKnown RBP16.99■□□□□ 0.31
PTK7-218ENST00000493339 PANK3Q9H999 370 aa16.99■□□□□ 0.31
PTK7-218ENST00000493339 GOLGA6L3A6NEY3 463 aa16.98■□□□□ 0.31
PTK7-218ENST00000493339 PLEKHH1Q9ULM0 1364 aa16.97■□□□□ 0.31
PTK7-218ENST00000493339 CFDP1Q9UEE9 299 aaPredicted RBP16.97■□□□□ 0.31
PTK7-218ENST00000493339 IGHDP01880 384 aa16.96■□□□□ 0.31
PTK7-218ENST00000493339 GOLGA2Q08379 1002 aa16.96■□□□□ 0.31
PTK7-218ENST00000493339 NUP155O75694 1391 aa16.96■□□□□ 0.31
PTK7-218ENST00000493339 WDR43Q15061 677 aaKnown RBP eCLIP16.96■□□□□ 0.31
PTK7-218ENST00000493339 ZMYM4Q5VZL5 1548 aa16.95■□□□□ 0.3
PTK7-218ENST00000493339 NBPF1Q3BBV0 1214 aa16.95■□□□□ 0.3
PTK7-218ENST00000493339 GAPVD1Q14C86 1478 aa16.95■□□□□ 0.3
PTK7-218ENST00000493339 BCAR3O75815 825 aa16.94■□□□□ 0.3
PTK7-218ENST00000493339 CLCN1P35523 988 aa16.94■□□□□ 0.3
PTK7-218ENST00000493339 RGL3Q3MIN7 710 aa16.94■□□□□ 0.3
PTK7-218ENST00000493339 KIAA0586Q9BVV6 1533 aa16.93■□□□□ 0.3
PTK7-218ENST00000493339 E9PCH4 1651 aa16.93■□□□□ 0.3
PTK7-218ENST00000493339 ANTXR1Q9H6X2 564 aa16.92■□□□□ 0.3
PTK7-218ENST00000493339 PLEKHH2Q8IVE3 1493 aa16.92■□□□□ 0.3
PTK7-218ENST00000493339 RRP9O43818 475 aaKnown RBP16.92■□□□□ 0.3
PTK7-218ENST00000493339 CCDC146Q8IYE0 955 aa16.91■□□□□ 0.3
PTK7-218ENST00000493339 ANKRD50Q9ULJ7 1429 aa16.9■□□□□ 0.3
PTK7-218ENST00000493339 DISP3Q9P2K9 1392 aa16.9■□□□□ 0.3
PTK7-218ENST00000493339 TBC1D2Q9BYX2 928 aa16.89■□□□□ 0.3
PTK7-218ENST00000493339 SPINK5Q9NQ38 1064 aaPredicted RBP16.89■□□□□ 0.29
PTK7-218ENST00000493339 KIF21AQ7Z4S6 1674 aa16.89■□□□□ 0.29
PTK7-218ENST00000493339 UPF2Q9HAU5 1272 aaKnown RBP16.89■□□□□ 0.29
PTK7-218ENST00000493339 DNAJC5BQ9UF47 199 aa16.89■□□□□ 0.29
PTK7-218ENST00000493339 WDR62O43379 1518 aa16.88■□□□□ 0.29
PTK7-218ENST00000493339 LAMC3Q9Y6N6 1575 aa16.88■□□□□ 0.29
PTK7-218ENST00000493339 ANKRD30AQ9BXX3 1397 aa16.88■□□□□ 0.29
PTK7-218ENST00000493339 SLFN5Q08AF3 891 aa16.88■□□□□ 0.29
PTK7-218ENST00000493339 ZNF608Q9ULD9 1512 aaPredicted RBP16.87■□□□□ 0.29
PTK7-218ENST00000493339 FSD2A1L4K1 749 aa16.87■□□□□ 0.29
PTK7-218ENST00000493339 CANXP27824 592 aaKnown RBP16.87■□□□□ 0.29
PTK7-218ENST00000493339 MCM4P33991 863 aa16.87■□□□□ 0.29
PTK7-218ENST00000493339 CAMSAP2Q08AD1 1489 aa16.87■□□□□ 0.29
PTK7-218ENST00000493339 INSRP06213 1382 aa16.87■□□□□ 0.29
PTK7-218ENST00000493339 ARHGEF12Q9NZN5 1544 aa16.86■□□□□ 0.29
PTK7-218ENST00000493339 COG6Q9Y2V7 657 aa16.86■□□□□ 0.29
PTK7-218ENST00000493339 EIF3AQ14152 1382 aaKnown RBP16.86■□□□□ 0.29
PTK7-218ENST00000493339 ZNF521Q96K83 1311 aa16.85■□□□□ 0.29
PTK7-218ENST00000493339 MAPK8IP3Q9UPT6 1336 aa16.85■□□□□ 0.29
PTK7-218ENST00000493339 PANK1Q8TE04 598 aa16.85■□□□□ 0.29
PTK7-218ENST00000493339 PPP2R1AP30153 589 aa16.84■□□□□ 0.29
PTK7-218ENST00000493339 TRAK2O60296 914 aa16.84■□□□□ 0.29
PTK7-218ENST00000493339 TESK2Q96S53 571 aa16.84■□□□□ 0.29
PTK7-218ENST00000493339 MYH16Q9H6N6 1097 aa16.84■□□□□ 0.29
PTK7-218ENST00000493339 KLHL34Q8N239 644 aa16.83■□□□□ 0.29
PTK7-218ENST00000493339 APAF1O14727 1248 aa16.83■□□□□ 0.28
PTK7-218ENST00000493339 PLCB2Q00722 1185 aa16.83■□□□□ 0.28
PTK7-218ENST00000493339 PRG4Q92954 1404 aaPredicted RBP16.83■□□□□ 0.28
PTK7-218ENST00000493339 CLUAP1Q96AJ1 413 aa16.83■□□□□ 0.28
PTK7-218ENST00000493339 ESPNB1AK53 854 aa16.82■□□□□ 0.28
PTK7-218ENST00000493339 TBC1D32Q96NH3 1257 aa16.82■□□□□ 0.28
PTK7-218ENST00000493339 KNSTRNQ9Y448 316 aa16.82■□□□□ 0.28
PTK7-218ENST00000493339 TMF1P82094 1093 aa16.82■□□□□ 0.28
PTK7-218ENST00000493339 ERBB4Q15303 1308 aa16.81■□□□□ 0.28
PTK7-218ENST00000493339 MRE11P49959 708 aa16.81■□□□□ 0.28
PTK7-218ENST00000493339 URB2Q14146 1524 aaKnown RBP16.81■□□□□ 0.28
PTK7-218ENST00000493339 NLRP1Q9C000 1473 aa16.81■□□□□ 0.28
PTK7-218ENST00000493339 COL17A1Q9UMD9 1497 aaPredicted RBP16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms