RNA–Protein interactions for RNA: ENST00000492816.6

FN1-224, Transcript of fibronectin 1, humanhuman

TSL 5

Gene FN1, Length 9,171 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-224ENST00000492816 TPM2P07951 284 aa6.74□□□□□ -1.33
FN1-224ENST00000492816 A0A0U1RQG5 324 aaPredicted RBP6.74□□□□□ -1.33
FN1-224ENST00000492816 TRIM21P19474 475 aaKnown RBP6.74□□□□□ -1.33
FN1-224ENST00000492816 DNAI2Q9GZS0 605 aa6.74□□□□□ -1.33
FN1-224ENST00000492816 GPRASP1Q5JY77 1395 aa6.74□□□□□ -1.33
FN1-224ENST00000492816 TPRNQ4KMQ1 711 aa6.74□□□□□ -1.33
FN1-224ENST00000492816 IL27Q8NEV9 243 aa6.74□□□□□ -1.33
FN1-224ENST00000492816 EEA1Q15075 1411 aa6.74□□□□□ -1.33
FN1-224ENST00000492816 TTLL12Q14166 644 aaPredicted RBP6.74□□□□□ -1.33
FN1-224ENST00000492816 SAMD1Q6SPF0 538 aaPredicted RBP6.74□□□□□ -1.33
FN1-224ENST00000492816 HMMRO75330 724 aa6.73□□□□□ -1.33
FN1-224ENST00000492816 CCDC47Q96A33 483 aaKnown RBP6.73□□□□□ -1.33
FN1-224ENST00000492816 RFX1P22670 979 aa6.73□□□□□ -1.33
FN1-224ENST00000492816 IKQ13123 557 aaPredicted RBP6.73□□□□□ -1.33
FN1-224ENST00000492816 DDX58O95786 925 aaKnown RBP6.72□□□□□ -1.33
FN1-224ENST00000492816 NBPF8Q3BBV2 869 aa6.72□□□□□ -1.33
FN1-224ENST00000492816 NBPF14Q5TI25 921 aa6.72□□□□□ -1.33
FN1-224ENST00000492816 PDE4CQ08493 712 aa6.72□□□□□ -1.33
FN1-224ENST00000492816 SMARCA2P51531 1590 aa6.72□□□□□ -1.33
FN1-224ENST00000492816 VGFO15240 615 aaPredicted RBP6.71□□□□□ -1.33
FN1-224ENST00000492816 COG3Q96JB2 828 aa6.71□□□□□ -1.33
FN1-224ENST00000492816 CRBNQ96SW2 442 aa6.71□□□□□ -1.33
FN1-224ENST00000492816 HNRNPMP52272 730 aaKnown RBP eCLIP6.71□□□□□ -1.34
FN1-224ENST00000492816 THEMISQ8N1K5 641 aaPredicted RBP6.71□□□□□ -1.34
FN1-224ENST00000492816 CEP164Q9UPV0 1460 aa6.71□□□□□ -1.34
FN1-224ENST00000492816 NUTM2FA1L443 756 aa6.71□□□□□ -1.34
FN1-224ENST00000492816 TMOD2Q9NZR1 351 aa6.71□□□□□ -1.34
FN1-224ENST00000492816 MPHOSPH10O00566 681 aaKnown RBP6.71□□□□□ -1.34
FN1-224ENST00000492816 DNTTIP2Q5QJE6 756 aaKnown RBP6.71□□□□□ -1.34
FN1-224ENST00000492816 KIF6Q6ZMV9 814 aa6.71□□□□□ -1.34
FN1-224ENST00000492816 DCAF11Q8TEB1 546 aa6.71□□□□□ -1.34
FN1-224ENST00000492816 HSP90AB1P08238 724 aaKnown RBP6.71□□□□□ -1.34
FN1-224ENST00000492816 FRAT1Q92837 279 aaPredicted RBP6.71□□□□□ -1.34
FN1-224ENST00000492816 TOM1O60784 492 aa6.7□□□□□ -1.34
FN1-224ENST00000492816 GOLGA3Q08378 1498 aa6.7□□□□□ -1.34
FN1-224ENST00000492816 ODF2Q5BJF6 829 aa6.7□□□□□ -1.34
FN1-224ENST00000492816 CPLX2Q6PUV4 134 aaKnown RBP6.7□□□□□ -1.34
FN1-224ENST00000492816 POLD1P28340 1107 aa6.69□□□□□ -1.34
FN1-224ENST00000492816 PLCB2Q00722 1185 aa6.69□□□□□ -1.34
FN1-224ENST00000492816 NOP2P46087 812 aaKnown RBP6.69□□□□□ -1.34
FN1-224ENST00000492816 SOGA1O94964 1423 aa6.69□□□□□ -1.34
FN1-224ENST00000492816 ERICH2A1L162 156 aa6.69□□□□□ -1.34
FN1-224ENST00000492816 ANKLE2Q86XL3 938 aa6.69□□□□□ -1.34
FN1-224ENST00000492816 WDR70Q9NW82 654 aa6.69□□□□□ -1.34
FN1-224ENST00000492816 ANKRD30AQ9BXX3 1397 aa6.69□□□□□ -1.34
FN1-224ENST00000492816 RDXP35241 583 aaKnown RBP6.68□□□□□ -1.34
FN1-224ENST00000492816 TSR1Q2NL82 804 aaKnown RBP6.68□□□□□ -1.34
FN1-224ENST00000492816 SLC3A2P08195 630 aaKnown RBP6.68□□□□□ -1.34
FN1-224ENST00000492816 STRN4Q9NRL3 753 aa6.68□□□□□ -1.34
FN1-224ENST00000492816 SMG6Q86US8 1419 aaKnown RBP6.68□□□□□ -1.34
FN1-224ENST00000492816 RBM5P52756 815 aaKnown RBP eCLIP6.68□□□□□ -1.341e-19■■□□□ 13
FN1-224ENST00000492816 VSIG10Q8N0Z9 540 aa6.68□□□□□ -1.34
FN1-224ENST00000492816 SETD5Q9C0A6 1442 aa6.68□□□□□ -1.34
FN1-224ENST00000492816 ABCC8Q09428 1581 aa6.68□□□□□ -1.34
FN1-224ENST00000492816 DRC7Q8IY82 874 aa6.67□□□□□ -1.34
FN1-224ENST00000492816 CUX2O14529 1486 aa6.67□□□□□ -1.34
FN1-224ENST00000492816 DDX10Q13206 875 aaKnown RBP6.67□□□□□ -1.34
FN1-224ENST00000492816 TPD52L1Q16890 204 aaPredicted RBP6.67□□□□□ -1.34
FN1-224ENST00000492816 NLRP2Q9NX02 1062 aa6.67□□□□□ -1.34
FN1-224ENST00000492816 GLIPR1L2Q4G1C9 344 aa6.67□□□□□ -1.34
FN1-224ENST00000492816 CC2D1BQ5T0F9 858 aaKnown RBP6.67□□□□□ -1.34
FN1-224ENST00000492816 GNL3LQ9NVN8 582 aaKnown RBP6.67□□□□□ -1.34
FN1-224ENST00000492816 U2AF1L5P0DN76 240 aaPredicted RBP6.67□□□□□ -1.34
FN1-224ENST00000492816 U2AF1Q01081 240 aaKnown RBP eCLIP6.67□□□□□ -1.343e-9■■□□□ 13.1
FN1-224ENST00000492816 CSPP1Q1MSJ5 1256 aa6.67□□□□□ -1.34
FN1-224ENST00000492816 NGLY1Q96IV0 654 aa6.67□□□□□ -1.34
FN1-224ENST00000492816 CLEC11AQ9Y240 323 aa6.66□□□□□ -1.34
FN1-224ENST00000492816 CARMIL1Q5VZK9 1371 aa6.66□□□□□ -1.34
FN1-224ENST00000492816 JPH4Q96JJ6 628 aa6.66□□□□□ -1.34
FN1-224ENST00000492816 TRIM29Q14134 588 aa6.66□□□□□ -1.34
FN1-224ENST00000492816 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.66□□□□□ -1.34
FN1-224ENST00000492816 PTPRGP23470 1445 aa6.66□□□□□ -1.34
FN1-224ENST00000492816 TPM3P06753 285 aa6.65□□□□□ -1.34
FN1-224ENST00000492816 TRDNQ13061 729 aa6.65□□□□□ -1.34
FN1-224ENST00000492816 DRC1Q96MC2 740 aa6.65□□□□□ -1.34
FN1-224ENST00000492816 UBAP1LF5GYI3 381 aa6.65□□□□□ -1.34
FN1-224ENST00000492816 DESP17661 470 aa6.65□□□□□ -1.34
FN1-224ENST00000492816 NGEFQ8N5V2 710 aa6.65□□□□□ -1.34
FN1-224ENST00000492816 MPHOSPH6Q99547 160 aaKnown RBP6.65□□□□□ -1.34
FN1-224ENST00000492816 APPP05067 770 aa6.65□□□□□ -1.35
FN1-224ENST00000492816 CT47A1Q5JQC4 288 aaPredicted RBP6.65□□□□□ -1.35
FN1-224ENST00000492816 CCDC27Q2M243 656 aa6.65□□□□□ -1.35
FN1-224ENST00000492816 FBXO3Q9UK99 471 aa6.65□□□□□ -1.35
FN1-224ENST00000492816 CREBRFQ8IUR6 639 aa6.65□□□□□ -1.35
FN1-224ENST00000492816 MYCNP04198 464 aaPredicted RBP6.64□□□□□ -1.35
FN1-224ENST00000492816 NF2P35240 595 aa6.64□□□□□ -1.35
FN1-224ENST00000492816 C9orf78Q9NZ63 289 aaPredicted RBP6.64□□□□□ -1.35
FN1-224ENST00000492816 EVC2Q86UK5 1308 aa6.64□□□□□ -1.35
FN1-224ENST00000492816 TRIM6-TRIM34B2RNG4 842 aa6.64□□□□□ -1.35
FN1-224ENST00000492816 SLC4A3P48751 1232 aa6.64□□□□□ -1.35
FN1-224ENST00000492816 ESCO1Q5FWF5 840 aa6.64□□□□□ -1.35
FN1-224ENST00000492816 SLC4A10Q6U841 1118 aa6.64□□□□□ -1.35
FN1-224ENST00000492816 TOM1L2Q6ZVM7 507 aa6.64□□□□□ -1.35
FN1-224ENST00000492816 CCDC97Q96F63 343 aaPredicted RBP6.64□□□□□ -1.35
FN1-224ENST00000492816 GRM1Q13255 1194 aa6.64□□□□□ -1.35
FN1-224ENST00000492816 BCL11BQ9C0K0 894 aaPredicted RBP6.64□□□□□ -1.35
FN1-224ENST00000492816 CCDC18Q5T9S5 1454 aa6.63□□□□□ -1.35
FN1-224ENST00000492816 BAZ1AQ9NRL2 1556 aaPredicted RBP6.63□□□□□ -1.35
FN1-224ENST00000492816 RBM42Q9BTD8 480 aaKnown RBP6.63□□□□□ -1.35
FN1-224ENST00000492816 PES1O00541 588 aaKnown RBP6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms