RNA–Protein interactions for RNA: ENST00000492741.5

PSPC1-204, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 1,709 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-204ENST00000492741 EIF2AK4Q9P2K8 1649 aaKnown RBP32.39■■■□□ 2.78
PSPC1-204ENST00000492741 ARHGEF40Q8TER5 1519 aa32.38■■■□□ 2.77
PSPC1-204ENST00000492741 GGT6Q6P531 493 aa32.35■■■□□ 2.77
PSPC1-204ENST00000492741 UNC13BO14795 1591 aa32.34■■■□□ 2.77
PSPC1-204ENST00000492741 KANK1Q14678 1352 aa32.33■■■□□ 2.77
PSPC1-204ENST00000492741 PZPP20742 1482 aa32.3■■■□□ 2.76
PSPC1-204ENST00000492741 KDM5DQ9BY66 1539 aa32.29■■■□□ 2.76
PSPC1-204ENST00000492741 REREQ9P2R6 1566 aa32.29■■■□□ 2.76
PSPC1-204ENST00000492741 FAM135AQ9P2D6 1515 aa32.27■■■□□ 2.76
PSPC1-204ENST00000492741 ARID4BQ4LE39 1312 aaPredicted RBP32.27■■■□□ 2.76
PSPC1-204ENST00000492741 PKD2Q13563 968 aa32.26■■■□□ 2.76
PSPC1-204ENST00000492741 CLSPNQ9HAW4 1339 aa32.26■■■□□ 2.76
PSPC1-204ENST00000492741 DEPDC5O75140 1603 aa32.26■■■□□ 2.76
PSPC1-204ENST00000492741 BCORL1Q5H9F3 1711 aa32.24■■■□□ 2.75
PSPC1-204ENST00000492741 FOXD1Q16676 465 aa32.24■■■□□ 2.75
PSPC1-204ENST00000492741 RNF17Q9BXT8 1623 aaKnown RBP32.23■■■□□ 2.75
PSPC1-204ENST00000492741 IQGAP3Q86VI3 1631 aa32.23■■■□□ 2.75
PSPC1-204ENST00000492741 AGLP35573 1532 aa32.23■■■□□ 2.75
PSPC1-204ENST00000492741 PRDM15P57071 1507 aaPredicted RBP32.21■■■□□ 2.75
PSPC1-204ENST00000492741 WASHC2CQ9Y4E1 1318 aa32.2■■■□□ 2.74
PSPC1-204ENST00000492741 MLECQ14165 292 aa32.2■■■□□ 2.74
PSPC1-204ENST00000492741 MROH1Q8NDA8 1641 aa32.19■■■□□ 2.74
PSPC1-204ENST00000492741 SIGLEC1Q9BZZ2 1709 aa32.15■■■□□ 2.74
PSPC1-204ENST00000492741 VWDEQ8N2E2 1590 aa32.14■■■□□ 2.74
PSPC1-204ENST00000492741 ZEB1P37275 1124 aaPredicted RBP32.12■■■□□ 2.73
PSPC1-204ENST00000492741 PPP6R1Q9UPN7 881 aa32.11■■■□□ 2.73
PSPC1-204ENST00000492741 NEUROD1Q13562 356 aa32.1■■■□□ 2.73
PSPC1-204ENST00000492741 SIN3AQ96ST3 1273 aa32.09■■■□□ 2.73
PSPC1-204ENST00000492741 ESF1Q9H501 851 aaKnown RBP32.09■■■□□ 2.73
PSPC1-204ENST00000492741 TET3O43151 1660 aa32.07■■■□□ 2.72
PSPC1-204ENST00000492741 ANKRD30BQ9BXX2 1392 aa32.07■■■□□ 2.72
PSPC1-204ENST00000492741 CEP152O94986 1710 aa32.07■■■□□ 2.72
PSPC1-204ENST00000492741 ABCC3O15438 1527 aa32.05■■■□□ 2.72
PSPC1-204ENST00000492741 LMTK2Q8IWU2 1503 aa32.05■■■□□ 2.72
PSPC1-204ENST00000492741 ZC3H13Q5T200 1668 aaKnown RBP32■■■□□ 2.71
PSPC1-204ENST00000492741 EFCAB6Q5THR3 1501 aa32■■■□□ 2.71
PSPC1-204ENST00000492741 E9PCH4 1651 aa32■■■□□ 2.71
PSPC1-204ENST00000492741 CAMSAP1Q5T5Y3 1602 aa31.95■■■□□ 2.71
PSPC1-204ENST00000492741 NPATQ14207 1427 aa31.93■■■□□ 2.7
PSPC1-204ENST00000492741 RPRD2Q5VT52 1461 aaKnown RBP31.93■■■□□ 2.7
PSPC1-204ENST00000492741 CLTCQ00610 1675 aaKnown RBP31.92■■■□□ 2.7
PSPC1-204ENST00000492741 CCDC144AA2RUR9 1427 aa31.9■■■□□ 2.7
PSPC1-204ENST00000492741 ARHGAP31Q2M1Z3 1444 aa31.9■■■□□ 2.7
PSPC1-204ENST00000492741 PLA2R1Q13018 1463 aa31.89■■■□□ 2.7
PSPC1-204ENST00000492741 TONSLQ96HA7 1378 aa31.87■■■□□ 2.69
PSPC1-204ENST00000492741 CNTLNQ9NXG0 1405 aa31.87■■■□□ 2.69
PSPC1-204ENST00000492741 PTPRTO14522 1441 aa31.86■■■□□ 2.69
PSPC1-204ENST00000492741 CFAP65Q6ZU64 1925 aaKnown RBP31.86■■■□□ 2.69
PSPC1-204ENST00000492741 SPHKAPQ2M3C7 1700 aa31.85■■■□□ 2.69
PSPC1-204ENST00000492741 ZMYM3Q14202 1370 aa31.85■■■□□ 2.69
PSPC1-204ENST00000492741 TIMELESSQ9UNS1 1208 aa31.83■■■□□ 2.69
PSPC1-204ENST00000492741 TRPM2O94759 1503 aa31.82■■■□□ 2.68
PSPC1-204ENST00000492741 FBXO31Q5XUX0 539 aaPredicted RBP31.8■■■□□ 2.68
PSPC1-204ENST00000492741 FER1L4A9Z1Z3 1794 aa31.78■■■□□ 2.68
PSPC1-204ENST00000492741 NOS1P29475 1434 aa31.76■■■□□ 2.68
PSPC1-204ENST00000492741 PLPPR3Q6T4P5 718 aa31.75■■■□□ 2.67
PSPC1-204ENST00000492741 ERVK-7P63135 1459 aa31.73■■■□□ 2.67
PSPC1-204ENST00000492741 MROH2AA6NES4 1674 aa31.73■■■□□ 2.67
PSPC1-204ENST00000492741 PREX1Q8TCU6 1659 aa31.73■■■□□ 2.67
PSPC1-204ENST00000492741 RGL3Q3MIN7 710 aa31.72■■■□□ 2.67
PSPC1-204ENST00000492741 CEBPAP49715 358 aaPredicted RBP31.72■■■□□ 2.67
PSPC1-204ENST00000492741 L3MBTL2Q969R5 705 aa31.72■■■□□ 2.67
PSPC1-204ENST00000492741 CLTCL1P53675 1640 aa31.71■■■□□ 2.67
PSPC1-204ENST00000492741 UGGT1Q9NYU2 1555 aa31.71■■■□□ 2.67
PSPC1-204ENST00000492741 SLC52A1Q9NWF4 448 aa31.7■■■□□ 2.67
PSPC1-204ENST00000492741 MADDQ8WXG6 1647 aa31.7■■■□□ 2.67
PSPC1-204ENST00000492741 CHGAP10645 457 aaKnown RBP31.69■■■□□ 2.66
PSPC1-204ENST00000492741 SYNMO15061 1565 aa31.67■■■□□ 2.66
PSPC1-204ENST00000492741 ADAMTSL3P82987 1691 aa31.67■■■□□ 2.66
PSPC1-204ENST00000492741 IDI1Q13907 227 aa31.66■■■□□ 2.66
PSPC1-204ENST00000492741 RIMS1Q86UR5 1692 aaKnown RBP31.65■■■□□ 2.66
PSPC1-204ENST00000492741 SPATA31D1Q6ZQQ2 1576 aa31.65■■■□□ 2.66
PSPC1-204ENST00000492741 PPP1R15AO75807 674 aaPredicted RBP31.63■■■□□ 2.65
PSPC1-204ENST00000492741 C3P01024 1663 aa31.62■■■□□ 2.65
PSPC1-204ENST00000492741 DCAF11Q8TEB1 546 aa31.61■■■□□ 2.65
PSPC1-204ENST00000492741 TNRQ92752 1358 aa31.61■■■□□ 2.65
PSPC1-204ENST00000492741 STAG3Q9UJ98 1225 aa31.6■■■□□ 2.65
PSPC1-204ENST00000492741 KDM2AQ9Y2K7 1162 aa31.6■■■□□ 2.65
PSPC1-204ENST00000492741 KIF1BO60333 1816 aa31.6■■■□□ 2.65
PSPC1-204ENST00000492741 SPATA31E1Q6ZUB1 1445 aa31.59■■■□□ 2.65
PSPC1-204ENST00000492741 ZNF326Q5BKZ1 582 aaKnown RBP31.59■■■□□ 2.65
PSPC1-204ENST00000492741 PIK3C2BO00750 1634 aa31.58■■■□□ 2.65
PSPC1-204ENST00000492741 ADGRB3O60242 1522 aa31.5■■■□□ 2.63
PSPC1-204ENST00000492741 NEURL4Q96JN8 1562 aa31.5■■■□□ 2.63
PSPC1-204ENST00000492741 PTPRMP28827 1452 aa31.47■■■□□ 2.63
PSPC1-204ENST00000492741 STAC3Q96MF2 364 aa31.45■■■□□ 2.63
PSPC1-204ENST00000492741 RPGRIP1LQ68CZ1 1315 aa31.44■■■□□ 2.62
PSPC1-204ENST00000492741 NLRP1Q9C000 1473 aa31.44■■■□□ 2.62
PSPC1-204ENST00000492741 NBPF8Q3BBV2 869 aa31.44■■■□□ 2.62
PSPC1-204ENST00000492741 TMEM131LA2VDJ0 1609 aa31.43■■■□□ 2.62
PSPC1-204ENST00000492741 KDM4FA0A1W2PPD8 638 aa31.41■■■□□ 2.62
PSPC1-204ENST00000492741 A2ML1A8K2U0 1454 aa31.38■■■□□ 2.61
PSPC1-204ENST00000492741 MYO5BQ9ULV0 1848 aa31.38■■■□□ 2.61
PSPC1-204ENST00000492741 NUTM2DQ5VT03 806 aaPredicted RBP31.37■■■□□ 2.61
PSPC1-204ENST00000492741 UHRF1BP1Q6BDS2 1440 aa31.37■■■□□ 2.61
PSPC1-204ENST00000492741 VGFO15240 615 aaPredicted RBP31.35■■■□□ 2.61
PSPC1-204ENST00000492741 PRAG1Q86YV5 1406 aa31.34■■■□□ 2.61
PSPC1-204ENST00000492741 ADGRF5Q8IZF2 1346 aa31.32■■■□□ 2.6
PSPC1-204ENST00000492741 MYO3AQ8NEV4 1616 aa31.32■■■□□ 2.6
PSPC1-204ENST00000492741 HDGFP51858 240 aaKnown RBP31.31■■■□□ 2.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms