RNA–Protein interactions for RNA: ENST00000491366.5

SEC22A-209, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22A, Length 482 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-209ENST00000491366 EIF2AK4Q9P2K8 1649 aaKnown RBP29.68■■■□□ 2.34
SEC22A-209ENST00000491366 RNF17Q9BXT8 1623 aaKnown RBP29.62■■■□□ 2.33
SEC22A-209ENST00000491366 ANKRD50Q9ULJ7 1429 aa29.62■■■□□ 2.33
SEC22A-209ENST00000491366 CNTLNQ9NXG0 1405 aa29.6■■■□□ 2.33
SEC22A-209ENST00000491366 CLTCQ00610 1675 aaKnown RBP29.6■■■□□ 2.33
SEC22A-209ENST00000491366 CEBPAP49715 358 aaPredicted RBP29.58■■■□□ 2.33
SEC22A-209ENST00000491366 PPP6R1Q9UPN7 881 aa29.58■■■□□ 2.33
SEC22A-209ENST00000491366 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.57■■■□□ 2.32
SEC22A-209ENST00000491366 WASHC2CQ9Y4E1 1318 aa29.56■■■□□ 2.32
SEC22A-209ENST00000491366 MROH1Q8NDA8 1641 aa29.56■■■□□ 2.32
SEC22A-209ENST00000491366 KDM5DQ9BY66 1539 aa29.55■■■□□ 2.32
SEC22A-209ENST00000491366 ZMYM3Q14202 1370 aa29.52■■■□□ 2.32
SEC22A-209ENST00000491366 PRDM15P57071 1507 aaPredicted RBP29.51■■■□□ 2.32
SEC22A-209ENST00000491366 MROH2AA6NES4 1674 aa29.51■■■□□ 2.31
SEC22A-209ENST00000491366 C3P01024 1663 aa29.51■■■□□ 2.31
SEC22A-209ENST00000491366 DEPDC5O75140 1603 aa29.51■■■□□ 2.31
SEC22A-209ENST00000491366 FAM135AQ9P2D6 1515 aa29.5■■■□□ 2.31
SEC22A-209ENST00000491366 ABCC3O15438 1527 aa29.49■■■□□ 2.31
SEC22A-209ENST00000491366 KANK1Q14678 1352 aa29.49■■■□□ 2.31
SEC22A-209ENST00000491366 NAIPQ13075 1403 aa29.48■■■□□ 2.31
SEC22A-209ENST00000491366 GCC2Q8IWJ2 1684 aa29.47■■■□□ 2.31
SEC22A-209ENST00000491366 HFM1A2PYH4 1435 aa29.46■■■□□ 2.31
SEC22A-209ENST00000491366 ZC3H13Q5T200 1668 aaKnown RBP29.46■■■□□ 2.31
SEC22A-209ENST00000491366 CEP152O94986 1710 aa29.45■■■□□ 2.31
SEC22A-209ENST00000491366 UNC13BO14795 1591 aa29.41■■■□□ 2.3
SEC22A-209ENST00000491366 VWDEQ8N2E2 1590 aa29.39■■■□□ 2.3
SEC22A-209ENST00000491366 CAMSAP1Q5T5Y3 1602 aa29.39■■■□□ 2.3
SEC22A-209ENST00000491366 PZPP20742 1482 aa29.36■■■□□ 2.29
SEC22A-209ENST00000491366 FBXO31Q5XUX0 539 aaPredicted RBP29.35■■■□□ 2.29
SEC22A-209ENST00000491366 NUP155O75694 1391 aa29.35■■■□□ 2.29
SEC22A-209ENST00000491366 NPATQ14207 1427 aa29.35■■■□□ 2.29
SEC22A-209ENST00000491366 LMTK2Q8IWU2 1503 aa29.34■■■□□ 2.29
SEC22A-209ENST00000491366 PREX1Q8TCU6 1659 aa29.29■■■□□ 2.28
SEC22A-209ENST00000491366 TRIM52Q96A61 297 aa29.29■■■□□ 2.28
SEC22A-209ENST00000491366 IQGAP3Q86VI3 1631 aa29.29■■■□□ 2.28
SEC22A-209ENST00000491366 SETD5Q9C0A6 1442 aa29.28■■■□□ 2.28
SEC22A-209ENST00000491366 EFCAB6Q5THR3 1501 aa29.28■■■□□ 2.28
SEC22A-209ENST00000491366 UHRF1BP1Q6BDS2 1440 aa29.28■■■□□ 2.28
SEC22A-209ENST00000491366 ARHGAP31Q2M1Z3 1444 aa29.27■■■□□ 2.28
SEC22A-209ENST00000491366 TNRQ92752 1358 aa29.26■■■□□ 2.28
SEC22A-209ENST00000491366 TET3O43151 1660 aa29.26■■■□□ 2.27
SEC22A-209ENST00000491366 LMTK3Q96Q04 1460 aa29.26■■■□□ 2.27
SEC22A-209ENST00000491366 ERVK-7P63135 1459 aa29.25■■■□□ 2.27
SEC22A-209ENST00000491366 MYO3AQ8NEV4 1616 aa29.23■■■□□ 2.27
SEC22A-209ENST00000491366 SPATA31D1Q6ZQQ2 1576 aa29.22■■■□□ 2.27
SEC22A-209ENST00000491366 SETD1BQ9UPS6 1966 aaKnown RBP29.21■■■□□ 2.27
SEC22A-209ENST00000491366 CFAP65Q6ZU64 1925 aaKnown RBP29.2■■■□□ 2.27
SEC22A-209ENST00000491366 HSPA2P54652 639 aa29.2■■■□□ 2.26
SEC22A-209ENST00000491366 RAB3GAP2Q9H2M9 1393 aa29.19■■■□□ 2.26
SEC22A-209ENST00000491366 RPRD2Q5VT52 1461 aaKnown RBP29.17■■■□□ 2.26
SEC22A-209ENST00000491366 E9PCH4 1651 aa29.16■■■□□ 2.26
SEC22A-209ENST00000491366 TRIM26Q12899 539 aaPredicted RBP29.16■■■□□ 2.26
SEC22A-209ENST00000491366 CEP170BQ9Y4F5 1589 aaPredicted RBP29.14■■■□□ 2.26
SEC22A-209ENST00000491366 A2ML1A8K2U0 1454 aa29.12■■■□□ 2.25
SEC22A-209ENST00000491366 SLC4A1APQ9BWU0 796 aaKnown RBP29.12■■■□□ 2.25
SEC22A-209ENST00000491366 ZNF142P52746 1687 aaPredicted RBP29.12■■■□□ 2.25
SEC22A-209ENST00000491366 NLRP1Q9C000 1473 aa29.11■■■□□ 2.25
SEC22A-209ENST00000491366 NOS1P29475 1434 aa29.11■■■□□ 2.25
SEC22A-209ENST00000491366 SYNMO15061 1565 aa29.09■■■□□ 2.25
SEC22A-209ENST00000491366 PKD2Q13563 968 aa29.08■■■□□ 2.25
SEC22A-209ENST00000491366 ACIN1Q9UKV3 1341 aaKnown RBP29.06■■■□□ 2.24
SEC22A-209ENST00000491366 MPHOSPH9Q99550 1183 aa29.04■■■□□ 2.24
SEC22A-209ENST00000491366 UGGT1Q9NYU2 1555 aa29.03■■■□□ 2.24
SEC22A-209ENST00000491366 IDI1Q13907 227 aa29.01■■■□□ 2.23
SEC22A-209ENST00000491366 FOXD1Q16676 465 aa29■■■□□ 2.23
SEC22A-209ENST00000491366 PIK3C2BO00750 1634 aa29■■■□□ 2.23
SEC22A-209ENST00000491366 HRCP23327 699 aa28.99■■■□□ 2.23
SEC22A-209ENST00000491366 SLC52A1Q9NWF4 448 aa28.99■■■□□ 2.23
SEC22A-209ENST00000491366 STAG3Q9UJ98 1225 aa28.99■■■□□ 2.23
SEC22A-209ENST00000491366 SPHKAPQ2M3C7 1700 aa28.99■■■□□ 2.23
SEC22A-209ENST00000491366 THEMISQ8N1K5 641 aaPredicted RBP28.97■■■□□ 2.23
SEC22A-209ENST00000491366 PTPRTO14522 1441 aa28.96■■■□□ 2.23
SEC22A-209ENST00000491366 UBR1Q8IWV7 1749 aa28.96■■■□□ 2.23
SEC22A-209ENST00000491366 CHGAP10645 457 aaKnown RBP28.92■■■□□ 2.22
SEC22A-209ENST00000491366 ADGRB3O60242 1522 aa28.92■■■□□ 2.22
SEC22A-209ENST00000491366 TRPM2O94759 1503 aa28.92■■■□□ 2.22
SEC22A-209ENST00000491366 PLA2R1Q13018 1463 aa28.91■■■□□ 2.22
SEC22A-209ENST00000491366 NCKAP5LQ9HCH0 1330 aa28.91■■■□□ 2.22
SEC22A-209ENST00000491366 STRCQ7RTU9 1775 aa28.9■■■□□ 2.22
SEC22A-209ENST00000491366 CLTCL1P53675 1640 aa28.87■■■□□ 2.21
SEC22A-209ENST00000491366 KDM5AP29375 1690 aaKnown RBP28.86■■■□□ 2.21
SEC22A-209ENST00000491366 TMEM131LA2VDJ0 1609 aa28.84■■■□□ 2.21
SEC22A-209ENST00000491366 ANKLE2Q86XL3 938 aa28.84■■■□□ 2.21
SEC22A-209ENST00000491366 TMEM2Q9UHN6 1383 aa28.83■■■□□ 2.21
SEC22A-209ENST00000491366 PCGF6Q9BYE7 350 aa28.82■■■□□ 2.2
SEC22A-209ENST00000491366 MYO5BQ9ULV0 1848 aa28.81■■■□□ 2.2
SEC22A-209ENST00000491366 SLIT1O75093 1534 aa28.81■■■□□ 2.2
SEC22A-209ENST00000491366 POLR1AO95602 1720 aaPredicted RBP28.8■■■□□ 2.2
SEC22A-209ENST00000491366 ARHGAP23Q9P227 1491 aa28.8■■■□□ 2.2
SEC22A-209ENST00000491366 DMRT2Q9Y5R5 561 aa28.8■■■□□ 2.2
SEC22A-209ENST00000491366 CCDC144AA2RUR9 1427 aa28.79■■■□□ 2.2
SEC22A-209ENST00000491366 TXNDC2Q86VQ3 553 aa28.79■■■□□ 2.2
SEC22A-209ENST00000491366 EID1Q9Y6B2 187 aa28.78■■■□□ 2.2
SEC22A-209ENST00000491366 NEURL4Q96JN8 1562 aa28.77■■■□□ 2.2
SEC22A-209ENST00000491366 LTKP29376 864 aa28.77■■■□□ 2.2
SEC22A-209ENST00000491366 SCAF11Q99590 1463 aaKnown RBP28.77■■■□□ 2.2
SEC22A-209ENST00000491366 ZNF326Q5BKZ1 582 aaKnown RBP28.75■■■□□ 2.19
SEC22A-209ENST00000491366 RIMS2Q9UQ26 1411 aa28.75■■■□□ 2.19
SEC22A-209ENST00000491366 KIF1BO60333 1816 aa28.73■■■□□ 2.19
SEC22A-209ENST00000491366 NPHP4O75161 1426 aaPredicted RBP28.73■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms