RNA–Protein interactions for RNA: ENST00000491073.5

PDPK1-212, Transcript of 3-phosphoinositide dependent protein kinase 1, humanhuman

TSL 1 (best)

Gene PDPK1, Length 2,387 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPK1-212ENST00000491073 ADGRL1O94910 1474 aa23.92■■□□□ 1.42
PDPK1-212ENST00000491073 INO80Q9ULG1 1556 aaPredicted RBP23.91■■□□□ 1.42
PDPK1-212ENST00000491073 DCAF11Q8TEB1 546 aa23.91■■□□□ 1.42
PDPK1-212ENST00000491073 BCORL1Q5H9F3 1711 aa23.9■■□□□ 1.42
PDPK1-212ENST00000491073 ANP32CO43423 234 aa23.89■■□□□ 1.42
PDPK1-212ENST00000491073 ATP7AQ04656 1500 aa23.89■■□□□ 1.41
PDPK1-212ENST00000491073 KIF7Q2M1P5 1343 aa23.88■■□□□ 1.41
PDPK1-212ENST00000491073 NPM1P06748 294 aaKnown RBP eCLIP23.87■■□□□ 1.41
PDPK1-212ENST00000491073 CCDC144AA2RUR9 1427 aa23.87■■□□□ 1.41
PDPK1-212ENST00000491073 USP47Q96K76 1375 aa23.86■■□□□ 1.41
PDPK1-212ENST00000491073 KDM5CP41229 1560 aa23.86■■□□□ 1.41
PDPK1-212ENST00000491073 RGL3Q3MIN7 710 aa23.86■■□□□ 1.41
PDPK1-212ENST00000491073 RALGAPBQ86X10 1494 aa23.86■■□□□ 1.41
PDPK1-212ENST00000491073 CCER2I3L3R5 266 aa23.83■■□□□ 1.41
PDPK1-212ENST00000491073 E9PCH4 1651 aa23.83■■□□□ 1.41
PDPK1-212ENST00000491073 CNTLNQ9NXG0 1405 aa23.82■■□□□ 1.4
PDPK1-212ENST00000491073 A2MP01023 1474 aa23.82■■□□□ 1.4
PDPK1-212ENST00000491073 KIDINS220Q9ULH0 1771 aa23.82■■□□□ 1.4
PDPK1-212ENST00000491073 CD109Q6YHK3 1445 aa23.81■■□□□ 1.4
PDPK1-212ENST00000491073 DEPDC5O75140 1603 aa23.81■■□□□ 1.4
PDPK1-212ENST00000491073 ATP10AO60312 1499 aa23.81■■□□□ 1.4
PDPK1-212ENST00000491073 POLR1AO95602 1720 aaPredicted RBP23.8■■□□□ 1.4
PDPK1-212ENST00000491073 PRAG1Q86YV5 1406 aa23.78■■□□□ 1.4
PDPK1-212ENST00000491073 MROH1Q8NDA8 1641 aa23.78■■□□□ 1.4
PDPK1-212ENST00000491073 CARD11Q9BXL7 1154 aa23.78■■□□□ 1.4
PDPK1-212ENST00000491073 KIF3BO15066 747 aa23.77■■□□□ 1.4
PDPK1-212ENST00000491073 MYT1LQ9UL68 1186 aa23.77■■□□□ 1.4
PDPK1-212ENST00000491073 NBPF1Q3BBV0 1214 aa23.77■■□□□ 1.4
PDPK1-212ENST00000491073 CCDC184Q52MB2 194 aa23.76■■□□□ 1.39
PDPK1-212ENST00000491073 DHX29Q7Z478 1369 aaKnown RBP23.76■■□□□ 1.39
PDPK1-212ENST00000491073 CYB5RLQ6IPT4 315 aa23.76■■□□□ 1.39
PDPK1-212ENST00000491073 VWDEQ8N2E2 1590 aa23.75■■□□□ 1.39
PDPK1-212ENST00000491073 TRPM1Q7Z4N2 1603 aa23.74■■□□□ 1.39
PDPK1-212ENST00000491073 ST20-MTHFSA0A0A6YYL1 179 aa23.72■■□□□ 1.39
PDPK1-212ENST00000491073 ZNF518AQ6AHZ1 1483 aa23.71■■□□□ 1.39
PDPK1-212ENST00000491073 POGZQ7Z3K3 1410 aa23.71■■□□□ 1.39
PDPK1-212ENST00000491073 ROCK2O75116 1388 aaKnown RBP23.7■■□□□ 1.38
PDPK1-212ENST00000491073 PTPRTO14522 1441 aa23.69■■□□□ 1.38
PDPK1-212ENST00000491073 TET3O43151 1660 aa23.69■■□□□ 1.38
PDPK1-212ENST00000491073 CLTCL1P53675 1640 aa23.68■■□□□ 1.38
PDPK1-212ENST00000491073 FRMPD1Q5SYB0 1578 aa23.68■■□□□ 1.38
PDPK1-212ENST00000491073 PRDM15P57071 1507 aaPredicted RBP23.68■■□□□ 1.38
PDPK1-212ENST00000491073 RAPGEF3O95398 923 aa23.67■■□□□ 1.38
PDPK1-212ENST00000491073 POLR3GLQ9BT43 218 aa23.67■■□□□ 1.38
PDPK1-212ENST00000491073 PRKRIP1Q9H875 184 aaPredicted RBP23.67■■□□□ 1.38
PDPK1-212ENST00000491073 RIMBP3CA6NJZ7 1639 aa23.67■■□□□ 1.38
PDPK1-212ENST00000491073 RIMBP3BA6NNM3 1639 aa23.67■■□□□ 1.38
PDPK1-212ENST00000491073 RIMBP3Q9UFD9 1639 aa23.67■■□□□ 1.38
PDPK1-212ENST00000491073 TRPM2O94759 1503 aa23.67■■□□□ 1.38
PDPK1-212ENST00000491073 SPHKAPQ2M3C7 1700 aa23.67■■□□□ 1.38
PDPK1-212ENST00000491073 EIF2AK4Q9P2K8 1649 aaKnown RBP23.67■■□□□ 1.38
PDPK1-212ENST00000491073 UGGT1Q9NYU2 1555 aa23.64■■□□□ 1.38
PDPK1-212ENST00000491073 GPRASP1Q5JY77 1395 aa23.63■■□□□ 1.37
PDPK1-212ENST00000491073 CFAP74Q9C0B2 1584 aa23.62■■□□□ 1.37
PDPK1-212ENST00000491073 MLH3Q9UHC1 1453 aa23.62■■□□□ 1.37
PDPK1-212ENST00000491073 ABCA6Q8N139 1617 aa23.61■■□□□ 1.37
PDPK1-212ENST00000491073 KANK1Q14678 1352 aa23.6■■□□□ 1.37
PDPK1-212ENST00000491073 PPRC1Q5VV67 1664 aaKnown RBP23.6■■□□□ 1.37
PDPK1-212ENST00000491073 CEP152O94986 1710 aa23.6■■□□□ 1.37
PDPK1-212ENST00000491073 HECW2Q9P2P5 1572 aa23.59■■□□□ 1.37
PDPK1-212ENST00000491073 MAP3K4Q9Y6R4 1608 aa23.58■■□□□ 1.37
PDPK1-212ENST00000491073 CNGB1Q14028 1251 aaPredicted RBP23.58■■□□□ 1.37
PDPK1-212ENST00000491073 NEO1Q92859 1461 aa23.57■■□□□ 1.36
PDPK1-212ENST00000491073 RNF17Q9BXT8 1623 aaKnown RBP23.57■■□□□ 1.36
PDPK1-212ENST00000491073 EFCAB6Q5THR3 1501 aa23.56■■□□□ 1.36
PDPK1-212ENST00000491073 MADDQ8WXG6 1647 aa23.56■■□□□ 1.36
PDPK1-212ENST00000491073 ARID4BQ4LE39 1312 aaPredicted RBP23.55■■□□□ 1.36
PDPK1-212ENST00000491073 TESK2Q96S53 571 aa23.55■■□□□ 1.36
PDPK1-212ENST00000491073 GGT6Q6P531 493 aa23.53■■□□□ 1.36
PDPK1-212ENST00000491073 LAMC1P11047 1609 aa23.53■■□□□ 1.36
PDPK1-212ENST00000491073 RICTORQ6R327 1708 aa23.52■■□□□ 1.36
PDPK1-212ENST00000491073 CFAP65Q6ZU64 1925 aaKnown RBP23.52■■□□□ 1.36
PDPK1-212ENST00000491073 LMTK2Q8IWU2 1503 aa23.51■■□□□ 1.35
PDPK1-212ENST00000491073 DISP3Q9P2K9 1392 aa23.51■■□□□ 1.35
PDPK1-212ENST00000491073 DIP2CQ9Y2E4 1556 aa23.5■■□□□ 1.35
PDPK1-212ENST00000491073 YEATS2Q9ULM3 1422 aa23.5■■□□□ 1.35
PDPK1-212ENST00000491073 GLI2P10070 1586 aa23.48■■□□□ 1.35
PDPK1-212ENST00000491073 NPATQ14207 1427 aa23.48■■□□□ 1.35
PDPK1-212ENST00000491073 MROH2AA6NES4 1674 aa23.48■■□□□ 1.35
PDPK1-212ENST00000491073 MRS2Q9HD23 443 aa23.47■■□□□ 1.35
PDPK1-212ENST00000491073 FAM69CQ0P6D2 419 aa23.47■■□□□ 1.35
PDPK1-212ENST00000491073 HNRNPUQ00839 825 aaKnown RBP eCLIP23.46■■□□□ 1.35
PDPK1-212ENST00000491073 DIP2BQ9P265 1576 aa23.45■■□□□ 1.34
PDPK1-212ENST00000491073 SUPT16HQ9Y5B9 1047 aaKnown RBP23.45■■□□□ 1.34
PDPK1-212ENST00000491073 ABCC3O15438 1527 aa23.44■■□□□ 1.34
PDPK1-212ENST00000491073 COL17A1Q9UMD9 1497 aaPredicted RBP23.44■■□□□ 1.34
PDPK1-212ENST00000491073 FAM9BQ8IZU0 186 aa23.44■■□□□ 1.34
PDPK1-212ENST00000491073 ADGRF5Q8IZF2 1346 aa23.44■■□□□ 1.34
PDPK1-212ENST00000491073 IQGAP1P46940 1657 aa23.42■■□□□ 1.34
PDPK1-212ENST00000491073 SIGLEC1Q9BZZ2 1709 aa23.42■■□□□ 1.34
PDPK1-212ENST00000491073 TSPOAP1O95153 1857 aa23.41■■□□□ 1.34
PDPK1-212ENST00000491073 KIF1BO60333 1816 aa23.4■■□□□ 1.34
PDPK1-212ENST00000491073 WASHC2CQ9Y4E1 1318 aa23.4■■□□□ 1.34
PDPK1-212ENST00000491073 NEURL4Q96JN8 1562 aa23.39■■□□□ 1.34
PDPK1-212ENST00000491073 IFT172Q9UG01 1749 aa23.39■■□□□ 1.33
PDPK1-212ENST00000491073 CFAP70Q5T0N1 1121 aa23.38■■□□□ 1.33
PDPK1-212ENST00000491073 PER1O15534 1290 aaPredicted RBP23.37■■□□□ 1.33
PDPK1-212ENST00000491073 ADGRB3O60242 1522 aa23.36■■□□□ 1.33
PDPK1-212ENST00000491073 CAMSAP1Q5T5Y3 1602 aa23.36■■□□□ 1.33
PDPK1-212ENST00000491073 MYOM2P54296 1465 aa23.33■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms