RNA–Protein interactions for RNA: ENST00000490942.1

TRA2A-208, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-208ENST00000490942 MLECQ14165 292 aa23.86■■□□□ 1.41
TRA2A-208ENST00000490942 SENP3Q9H4L4 574 aaPredicted RBP23.85■■□□□ 1.41
TRA2A-208ENST00000490942 DEPDC5O75140 1603 aa23.84■■□□□ 1.41
TRA2A-208ENST00000490942 GGT6Q6P531 493 aa23.84■■□□□ 1.41
TRA2A-208ENST00000490942 PRDM15P57071 1507 aaPredicted RBP23.84■■□□□ 1.41
TRA2A-208ENST00000490942 GCC2Q8IWJ2 1684 aa23.83■■□□□ 1.41
TRA2A-208ENST00000490942 MADDQ8WXG6 1647 aa23.83■■□□□ 1.41
TRA2A-208ENST00000490942 KDM5DQ9BY66 1539 aa23.83■■□□□ 1.41
TRA2A-208ENST00000490942 ACIN1Q9UKV3 1341 aaKnown RBP23.83■■□□□ 1.4
TRA2A-208ENST00000490942 ESF1Q9H501 851 aaKnown RBP23.82■■□□□ 1.4
TRA2A-208ENST00000490942 MROH1Q8NDA8 1641 aa23.81■■□□□ 1.4
TRA2A-208ENST00000490942 FER1L4A9Z1Z3 1794 aa23.8■■□□□ 1.4
TRA2A-208ENST00000490942 KANK1Q14678 1352 aa23.78■■□□□ 1.4
TRA2A-208ENST00000490942 ZC3H13Q5T200 1668 aaKnown RBP23.78■■□□□ 1.4
TRA2A-208ENST00000490942 MROH2AA6NES4 1674 aa23.77■■□□□ 1.4
TRA2A-208ENST00000490942 PTPRMP28827 1452 aa23.77■■□□□ 1.4
TRA2A-208ENST00000490942 WASHC2CQ9Y4E1 1318 aa23.77■■□□□ 1.4
TRA2A-208ENST00000490942 UNC13BO14795 1591 aa23.77■■□□□ 1.4
TRA2A-208ENST00000490942 VWDEQ8N2E2 1590 aa23.76■■□□□ 1.39
TRA2A-208ENST00000490942 TRIM26Q12899 539 aaPredicted RBP23.75■■□□□ 1.39
TRA2A-208ENST00000490942 ABCC3O15438 1527 aa23.74■■□□□ 1.39
TRA2A-208ENST00000490942 LMTK2Q8IWU2 1503 aa23.74■■□□□ 1.39
TRA2A-208ENST00000490942 RIMS1Q86UR5 1692 aaKnown RBP23.74■■□□□ 1.39
TRA2A-208ENST00000490942 ZMYM3Q14202 1370 aa23.72■■□□□ 1.39
TRA2A-208ENST00000490942 SETD5Q9C0A6 1442 aa23.72■■□□□ 1.39
TRA2A-208ENST00000490942 CLTCQ00610 1675 aaKnown RBP23.7■■□□□ 1.39
TRA2A-208ENST00000490942 ARHGAP31Q2M1Z3 1444 aa23.7■■□□□ 1.38
TRA2A-208ENST00000490942 HRCP23327 699 aa23.7■■□□□ 1.38
TRA2A-208ENST00000490942 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.68■■□□□ 1.387e-8■□□□□ 10.6
TRA2A-208ENST00000490942 NPATQ14207 1427 aa23.67■■□□□ 1.38
TRA2A-208ENST00000490942 PZPP20742 1482 aa23.67■■□□□ 1.38
TRA2A-208ENST00000490942 NUP155O75694 1391 aa23.66■■□□□ 1.38
TRA2A-208ENST00000490942 IQGAP3Q86VI3 1631 aa23.66■■□□□ 1.38
TRA2A-208ENST00000490942 C3P01024 1663 aa23.64■■□□□ 1.38
TRA2A-208ENST00000490942 RPRD2Q5VT52 1461 aaKnown RBP23.63■■□□□ 1.37
TRA2A-208ENST00000490942 CAMSAP1Q5T5Y3 1602 aa23.63■■□□□ 1.37
TRA2A-208ENST00000490942 EFCAB6Q5THR3 1501 aa23.62■■□□□ 1.37
TRA2A-208ENST00000490942 RAB3GAP2Q9H2M9 1393 aa23.62■■□□□ 1.37
TRA2A-208ENST00000490942 CEP152O94986 1710 aa23.62■■□□□ 1.37
TRA2A-208ENST00000490942 TET3O43151 1660 aa23.61■■□□□ 1.37
TRA2A-208ENST00000490942 CEBPAP49715 358 aaPredicted RBP23.58■■□□□ 1.37
TRA2A-208ENST00000490942 SETD1BQ9UPS6 1966 aaKnown RBP23.57■■□□□ 1.36
TRA2A-208ENST00000490942 SPATA31D1Q6ZQQ2 1576 aa23.56■■□□□ 1.36
TRA2A-208ENST00000490942 TRIM52Q96A61 297 aa23.55■■□□□ 1.36
TRA2A-208ENST00000490942 ERVK-7P63135 1459 aa23.54■■□□□ 1.36
TRA2A-208ENST00000490942 NOS1P29475 1434 aa23.51■■□□□ 1.35
TRA2A-208ENST00000490942 TNRQ92752 1358 aa23.51■■□□□ 1.35
TRA2A-208ENST00000490942 FBXO31Q5XUX0 539 aaPredicted RBP23.5■■□□□ 1.35
TRA2A-208ENST00000490942 SLC4A1APQ9BWU0 796 aaKnown RBP23.49■■□□□ 1.35
TRA2A-208ENST00000490942 NLRP1Q9C000 1473 aa23.49■■□□□ 1.35
TRA2A-208ENST00000490942 E9PCH4 1651 aa23.48■■□□□ 1.35
TRA2A-208ENST00000490942 PREX1Q8TCU6 1659 aa23.48■■□□□ 1.35
TRA2A-208ENST00000490942 UHRF1BP1Q6BDS2 1440 aa23.48■■□□□ 1.35
TRA2A-208ENST00000490942 PLPPR3Q6T4P5 718 aa23.47■■□□□ 1.35
TRA2A-208ENST00000490942 MPHOSPH9Q99550 1183 aa23.47■■□□□ 1.35
TRA2A-208ENST00000490942 PHF23Q9BUL5 403 aaPredicted RBP23.47■■□□□ 1.35
TRA2A-208ENST00000490942 PTPRTO14522 1441 aa23.45■■□□□ 1.34
TRA2A-208ENST00000490942 SLC52A1Q9NWF4 448 aa23.44■■□□□ 1.34
TRA2A-208ENST00000490942 PKD2Q13563 968 aa23.43■■□□□ 1.34
TRA2A-208ENST00000490942 MYO3AQ8NEV4 1616 aa23.43■■□□□ 1.34
TRA2A-208ENST00000490942 LMTK3Q96Q04 1460 aa23.43■■□□□ 1.34
TRA2A-208ENST00000490942 A2ML1A8K2U0 1454 aa23.42■■□□□ 1.34
TRA2A-208ENST00000490942 ZNF142P52746 1687 aaPredicted RBP23.41■■□□□ 1.34
TRA2A-208ENST00000490942 SYNMO15061 1565 aa23.4■■□□□ 1.34
TRA2A-208ENST00000490942 CEP170BQ9Y4F5 1589 aaPredicted RBP23.4■■□□□ 1.34
TRA2A-208ENST00000490942 TRPM2O94759 1503 aa23.38■■□□□ 1.33
TRA2A-208ENST00000490942 PIK3C2BO00750 1634 aa23.36■■□□□ 1.33
TRA2A-208ENST00000490942 SPHKAPQ2M3C7 1700 aa23.36■■□□□ 1.33
TRA2A-208ENST00000490942 KDM5AP29375 1690 aaKnown RBP23.35■■□□□ 1.33
TRA2A-208ENST00000490942 PCGF6Q9BYE7 350 aa23.35■■□□□ 1.33
TRA2A-208ENST00000490942 CFAP65Q6ZU64 1925 aaKnown RBP23.34■■□□□ 1.33
TRA2A-208ENST00000490942 IDI1Q13907 227 aa23.34■■□□□ 1.33
TRA2A-208ENST00000490942 PLA2R1Q13018 1463 aa23.34■■□□□ 1.33
TRA2A-208ENST00000490942 UGGT1Q9NYU2 1555 aa23.32■■□□□ 1.32
TRA2A-208ENST00000490942 THEMISQ8N1K5 641 aaPredicted RBP23.32■■□□□ 1.32
TRA2A-208ENST00000490942 ADGRB3O60242 1522 aa23.28■■□□□ 1.32
TRA2A-208ENST00000490942 UBR1Q8IWV7 1749 aa23.27■■□□□ 1.32
TRA2A-208ENST00000490942 ANKRD30BQ9BXX2 1392 aa23.27■■□□□ 1.31
TRA2A-208ENST00000490942 CCDC144AA2RUR9 1427 aa23.26■■□□□ 1.31
TRA2A-208ENST00000490942 FOXD1Q16676 465 aa23.25■■□□□ 1.31
TRA2A-208ENST00000490942 STAG3Q9UJ98 1225 aa23.25■■□□□ 1.31
TRA2A-208ENST00000490942 SLIT1O75093 1534 aa23.23■■□□□ 1.31
TRA2A-208ENST00000490942 TMEM131LA2VDJ0 1609 aa23.23■■□□□ 1.31
TRA2A-208ENST00000490942 CLTCL1P53675 1640 aa23.23■■□□□ 1.31
TRA2A-208ENST00000490942 ARHGAP23Q9P227 1491 aa23.23■■□□□ 1.31
TRA2A-208ENST00000490942 NEURL4Q96JN8 1562 aa23.23■■□□□ 1.31
TRA2A-208ENST00000490942 HSPA2P54652 639 aa23.22■■□□□ 1.31
TRA2A-208ENST00000490942 DHX57Q6P158 1386 aaKnown RBP23.22■■□□□ 1.31
TRA2A-208ENST00000490942 TMEM2Q9UHN6 1383 aa23.22■■□□□ 1.31
TRA2A-208ENST00000490942 HDGFP51858 240 aaKnown RBP23.18■■□□□ 1.3
TRA2A-208ENST00000490942 ANKLE2Q86XL3 938 aa23.18■■□□□ 1.3
TRA2A-208ENST00000490942 KIF1BO60333 1816 aa23.16■■□□□ 1.3
TRA2A-208ENST00000490942 DMRT2Q9Y5R5 561 aa23.15■■□□□ 1.3
TRA2A-208ENST00000490942 SPATA31E1Q6ZUB1 1445 aa23.15■■□□□ 1.3
TRA2A-208ENST00000490942 RPGRIP1LQ68CZ1 1315 aa23.14■■□□□ 1.3
TRA2A-208ENST00000490942 MED14O60244 1454 aa23.14■■□□□ 1.29
TRA2A-208ENST00000490942 CHGAP10645 457 aaKnown RBP23.14■■□□□ 1.29
TRA2A-208ENST00000490942 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.14■■□□□ 1.29
TRA2A-208ENST00000490942 EID1Q9Y6B2 187 aa23.14■■□□□ 1.29
TRA2A-208ENST00000490942 ZFYVE9O95405 1425 aa23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms