RNA–Protein interactions for RNA: ENST00000489131.1

TOP3A-206, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-206ENST00000489131 VWDEQ8N2E2 1590 aa18.86■□□□□ 0.61
TOP3A-206ENST00000489131 PRDM15P57071 1507 aaPredicted RBP18.86■□□□□ 0.61
TOP3A-206ENST00000489131 RAPGEF3O95398 923 aa18.86■□□□□ 0.61
TOP3A-206ENST00000489131 MPHOSPH9Q99550 1183 aa18.86■□□□□ 0.61
TOP3A-206ENST00000489131 COL17A1Q9UMD9 1497 aaPredicted RBP18.85■□□□□ 0.61
TOP3A-206ENST00000489131 FAM135AQ9P2D6 1515 aa18.84■□□□□ 0.61
TOP3A-206ENST00000489131 TRIM52Q96A61 297 aa18.84■□□□□ 0.61
TOP3A-206ENST00000489131 MROH1Q8NDA8 1641 aa18.84■□□□□ 0.61
TOP3A-206ENST00000489131 NUP155O75694 1391 aa18.82■□□□□ 0.6
TOP3A-206ENST00000489131 YEATS2Q9ULM3 1422 aa18.81■□□□□ 0.6
TOP3A-206ENST00000489131 ARHGEF40Q8TER5 1519 aa18.8■□□□□ 0.6
TOP3A-206ENST00000489131 AGLP35573 1532 aa18.79■□□□□ 0.6
TOP3A-206ENST00000489131 SLC4A1APQ9BWU0 796 aaKnown RBP18.79■□□□□ 0.6
TOP3A-206ENST00000489131 TIMELESSQ9UNS1 1208 aa18.79■□□□□ 0.6
TOP3A-206ENST00000489131 ANKRD30BQ9BXX2 1392 aa18.79■□□□□ 0.6
TOP3A-206ENST00000489131 LMTK2Q8IWU2 1503 aa18.79■□□□□ 0.6
TOP3A-206ENST00000489131 ATP10AO60312 1499 aa18.78■□□□□ 0.6
TOP3A-206ENST00000489131 TET3O43151 1660 aa18.76■□□□□ 0.59
TOP3A-206ENST00000489131 MYT1LQ9UL68 1186 aa18.73■□□□□ 0.59
TOP3A-206ENST00000489131 KANK1Q14678 1352 aa18.72■□□□□ 0.59
TOP3A-206ENST00000489131 RPRD2Q5VT52 1461 aaKnown RBP18.71■□□□□ 0.59
TOP3A-206ENST00000489131 ZC3H13Q5T200 1668 aaKnown RBP18.71■□□□□ 0.59
TOP3A-206ENST00000489131 KIF3BO15066 747 aa18.71■□□□□ 0.59
TOP3A-206ENST00000489131 PKD2Q13563 968 aa18.71■□□□□ 0.59
TOP3A-206ENST00000489131 E9PCH4 1651 aa18.69■□□□□ 0.58
TOP3A-206ENST00000489131 EFCAB6Q5THR3 1501 aa18.69■□□□□ 0.58
TOP3A-206ENST00000489131 SIN3AQ96ST3 1273 aa18.67■□□□□ 0.58
TOP3A-206ENST00000489131 ABCC3O15438 1527 aa18.67■□□□□ 0.58
TOP3A-206ENST00000489131 PTPRTO14522 1441 aa18.66■□□□□ 0.58
TOP3A-206ENST00000489131 PLA2R1Q13018 1463 aa18.66■□□□□ 0.58
TOP3A-206ENST00000489131 SIGLEC1Q9BZZ2 1709 aa18.66■□□□□ 0.58
TOP3A-206ENST00000489131 PPP6R1Q9UPN7 881 aa18.65■□□□□ 0.58
TOP3A-206ENST00000489131 CEP152O94986 1710 aa18.64■□□□□ 0.57
TOP3A-206ENST00000489131 FOXD1Q16676 465 aa18.64■□□□□ 0.57
TOP3A-206ENST00000489131 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.64■□□□□ 0.57
TOP3A-206ENST00000489131 ARHGAP31Q2M1Z3 1444 aa18.64■□□□□ 0.57
TOP3A-206ENST00000489131 TRPM2O94759 1503 aa18.64■□□□□ 0.57
TOP3A-206ENST00000489131 CAMSAP1Q5T5Y3 1602 aa18.62■□□□□ 0.57
TOP3A-206ENST00000489131 SPHKAPQ2M3C7 1700 aa18.62■□□□□ 0.57
TOP3A-206ENST00000489131 NEURL4Q96JN8 1562 aa18.61■□□□□ 0.57
TOP3A-206ENST00000489131 TONSLQ96HA7 1378 aa18.6■□□□□ 0.57
TOP3A-206ENST00000489131 NEUROD1Q13562 356 aa18.58■□□□□ 0.56
TOP3A-206ENST00000489131 NPATQ14207 1427 aa18.57■□□□□ 0.56
TOP3A-206ENST00000489131 CCDC144AA2RUR9 1427 aa18.57■□□□□ 0.56
TOP3A-206ENST00000489131 GGT6Q6P531 493 aa18.55■□□□□ 0.56
TOP3A-206ENST00000489131 WASHC2CQ9Y4E1 1318 aa18.54■□□□□ 0.56
TOP3A-206ENST00000489131 PPP1R15AO75807 674 aaPredicted RBP18.54■□□□□ 0.56
TOP3A-206ENST00000489131 NOS1P29475 1434 aa18.54■□□□□ 0.56
TOP3A-206ENST00000489131 CNTLNQ9NXG0 1405 aa18.54■□□□□ 0.56
TOP3A-206ENST00000489131 CLTCL1P53675 1640 aa18.52■□□□□ 0.55
TOP3A-206ENST00000489131 SPATA31E1Q6ZUB1 1445 aa18.51■□□□□ 0.55
TOP3A-206ENST00000489131 PIK3C2BO00750 1634 aa18.5■□□□□ 0.55
TOP3A-206ENST00000489131 L3MBTL2Q969R5 705 aa18.49■□□□□ 0.55
TOP3A-206ENST00000489131 MROH2AA6NES4 1674 aa18.49■□□□□ 0.55
TOP3A-206ENST00000489131 CLTCQ00610 1675 aaKnown RBP18.48■□□□□ 0.55
TOP3A-206ENST00000489131 UHRF1BP1Q6BDS2 1440 aa18.48■□□□□ 0.55
TOP3A-206ENST00000489131 PREX1Q8TCU6 1659 aa18.47■□□□□ 0.55
TOP3A-206ENST00000489131 SYNMO15061 1565 aa18.47■□□□□ 0.55
TOP3A-206ENST00000489131 SPATA31D1Q6ZQQ2 1576 aa18.45■□□□□ 0.54
TOP3A-206ENST00000489131 AEBP2Q6ZN18 517 aaPredicted RBP18.44■□□□□ 0.54
TOP3A-206ENST00000489131 ADGRB3O60242 1522 aa18.44■□□□□ 0.54
TOP3A-206ENST00000489131 ERVK-7P63135 1459 aa18.43■□□□□ 0.54
TOP3A-206ENST00000489131 KIF1BO60333 1816 aa18.42■□□□□ 0.54
TOP3A-206ENST00000489131 STAC3Q96MF2 364 aa18.42■□□□□ 0.54
TOP3A-206ENST00000489131 UGGT1Q9NYU2 1555 aa18.41■□□□□ 0.54
TOP3A-206ENST00000489131 IFT172Q9UG01 1749 aa18.39■□□□□ 0.53
TOP3A-206ENST00000489131 SLC52A1Q9NWF4 448 aa18.38■□□□□ 0.53
TOP3A-206ENST00000489131 ZMYM3Q14202 1370 aa18.37■□□□□ 0.53
TOP3A-206ENST00000489131 MYOM2P54296 1465 aa18.37■□□□□ 0.53
TOP3A-206ENST00000489131 FER1L4A9Z1Z3 1794 aa18.37■□□□□ 0.53
TOP3A-206ENST00000489131 RALGAPBQ86X10 1494 aa18.36■□□□□ 0.53
TOP3A-206ENST00000489131 PRAG1Q86YV5 1406 aa18.36■□□□□ 0.53
TOP3A-206ENST00000489131 ARID4BQ4LE39 1312 aaPredicted RBP18.35■□□□□ 0.53
TOP3A-206ENST00000489131 KDM5AP29375 1690 aaKnown RBP18.34■□□□□ 0.53
TOP3A-206ENST00000489131 ADAMTSL3P82987 1691 aa18.34■□□□□ 0.53
TOP3A-206ENST00000489131 NBPF8Q3BBV2 869 aa18.34■□□□□ 0.53
TOP3A-206ENST00000489131 TMEM131LA2VDJ0 1609 aa18.34■□□□□ 0.53
TOP3A-206ENST00000489131 NRXN1Q9ULB1 1477 aa18.33■□□□□ 0.53
TOP3A-206ENST00000489131 MLECQ14165 292 aa18.33■□□□□ 0.52
TOP3A-206ENST00000489131 MADDQ8WXG6 1647 aa18.33■□□□□ 0.52
TOP3A-206ENST00000489131 CFAP65Q6ZU64 1925 aaKnown RBP18.33■□□□□ 0.52
TOP3A-206ENST00000489131 LAMC1P11047 1609 aa18.32■□□□□ 0.52
TOP3A-206ENST00000489131 TRPM1Q7Z4N2 1603 aa18.32■□□□□ 0.52
TOP3A-206ENST00000489131 C3P01024 1663 aa18.31■□□□□ 0.52
TOP3A-206ENST00000489131 RPGRIP1LQ68CZ1 1315 aa18.31■□□□□ 0.52
TOP3A-206ENST00000489131 ESF1Q9H501 851 aaKnown RBP18.31■□□□□ 0.52
TOP3A-206ENST00000489131 PPLO60437 1756 aa18.31■□□□□ 0.52
TOP3A-206ENST00000489131 KIAA1210Q9ULL0 1709 aa18.3■□□□□ 0.52
TOP3A-206ENST00000489131 DCAF11Q8TEB1 546 aa18.3■□□□□ 0.52
TOP3A-206ENST00000489131 GPRASP1Q5JY77 1395 aa18.3■□□□□ 0.52
TOP3A-206ENST00000489131 ZNF316A6NFI3 1004 aaPredicted RBP18.29■□□□□ 0.52
TOP3A-206ENST00000489131 IDI1Q13907 227 aa18.28■□□□□ 0.52
TOP3A-206ENST00000489131 FBXO31Q5XUX0 539 aaPredicted RBP18.28■□□□□ 0.52
TOP3A-206ENST00000489131 ZFYVE9O95405 1425 aa18.28■□□□□ 0.52
TOP3A-206ENST00000489131 NEXMIFQ5QGS0 1516 aa18.28■□□□□ 0.52
TOP3A-206ENST00000489131 RGL3Q3MIN7 710 aa18.27■□□□□ 0.52
TOP3A-206ENST00000489131 NLRP1Q9C000 1473 aa18.26■□□□□ 0.51
TOP3A-206ENST00000489131 TNRQ92752 1358 aa18.25■□□□□ 0.51
TOP3A-206ENST00000489131 A2ML1A8K2U0 1454 aa18.24■□□□□ 0.51
TOP3A-206ENST00000489131 MYO5BQ9ULV0 1848 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms