RNA–Protein interactions for RNA: ENST00000489081.5

CMSS1-205, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 2 BASIC

Gene CMSS1, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-205ENST00000489081 A2MP01023 1474 aa16.96■□□□□ 0.31
CMSS1-205ENST00000489081 YEATS2Q9ULM3 1422 aa16.96■□□□□ 0.3
CMSS1-205ENST00000489081 ABCA6Q8N139 1617 aa16.95■□□□□ 0.3
CMSS1-205ENST00000489081 CLSPNQ9HAW4 1339 aa16.95■□□□□ 0.3
CMSS1-205ENST00000489081 DIP2CQ9Y2E4 1556 aa16.94■□□□□ 0.3
CMSS1-205ENST00000489081 KDM5DQ9BY66 1539 aa16.93■□□□□ 0.3
CMSS1-205ENST00000489081 MPHOSPH9Q99550 1183 aa16.93■□□□□ 0.3
CMSS1-205ENST00000489081 PZPP20742 1482 aa16.93■□□□□ 0.3
CMSS1-205ENST00000489081 NUP155O75694 1391 aa16.92■□□□□ 0.3
CMSS1-205ENST00000489081 KCNA4P22459 653 aa16.92■□□□□ 0.3
CMSS1-205ENST00000489081 UNC13BO14795 1591 aa16.91■□□□□ 0.3
CMSS1-205ENST00000489081 EIF2AK4Q9P2K8 1649 aaKnown RBP16.9■□□□□ 0.3
CMSS1-205ENST00000489081 KIF3BO15066 747 aa16.9■□□□□ 0.3
CMSS1-205ENST00000489081 SLC4A1APQ9BWU0 796 aaKnown RBP16.9■□□□□ 0.3
CMSS1-205ENST00000489081 ATP10AO60312 1499 aa16.89■□□□□ 0.29
CMSS1-205ENST00000489081 ZEB1P37275 1124 aaPredicted RBP16.87■□□□□ 0.29
CMSS1-205ENST00000489081 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.87■□□□□ 0.293e-6■■■■□ 20.2
CMSS1-205ENST00000489081 ARHGEF40Q8TER5 1519 aa16.86■□□□□ 0.29
CMSS1-205ENST00000489081 REREQ9P2R6 1566 aa16.85■□□□□ 0.29
CMSS1-205ENST00000489081 DEPDC5O75140 1603 aa16.85■□□□□ 0.29
CMSS1-205ENST00000489081 FAM135AQ9P2D6 1515 aa16.85■□□□□ 0.29
CMSS1-205ENST00000489081 PKD2Q13563 968 aa16.84■□□□□ 0.29
CMSS1-205ENST00000489081 IQGAP3Q86VI3 1631 aa16.84■□□□□ 0.29
CMSS1-205ENST00000489081 MROH1Q8NDA8 1641 aa16.84■□□□□ 0.29
CMSS1-205ENST00000489081 BCORL1Q5H9F3 1711 aa16.84■□□□□ 0.29
CMSS1-205ENST00000489081 PRDM15P57071 1507 aaPredicted RBP16.83■□□□□ 0.28
CMSS1-205ENST00000489081 RNF17Q9BXT8 1623 aaKnown RBP16.83■□□□□ 0.28
CMSS1-205ENST00000489081 VWDEQ8N2E2 1590 aa16.82■□□□□ 0.28
CMSS1-205ENST00000489081 KANK1Q14678 1352 aa16.82■□□□□ 0.28
CMSS1-205ENST00000489081 AGLP35573 1532 aa16.81■□□□□ 0.28
CMSS1-205ENST00000489081 ANKRD30BQ9BXX2 1392 aa16.8■□□□□ 0.28
CMSS1-205ENST00000489081 GGT6Q6P531 493 aa16.79■□□□□ 0.28
CMSS1-205ENST00000489081 PPP4R3CPQ6ZMV5 832 aa16.79■□□□□ 0.28
CMSS1-205ENST00000489081 SIN3AQ96ST3 1273 aa16.78■□□□□ 0.28
CMSS1-205ENST00000489081 LMTK2Q8IWU2 1503 aa16.76■□□□□ 0.27
CMSS1-205ENST00000489081 SIGLEC1Q9BZZ2 1709 aa16.74■□□□□ 0.27
CMSS1-205ENST00000489081 NEUROD1Q13562 356 aa16.74■□□□□ 0.27
CMSS1-205ENST00000489081 TET3O43151 1660 aa16.73■□□□□ 0.27
CMSS1-205ENST00000489081 ABCC3O15438 1527 aa16.73■□□□□ 0.27
CMSS1-205ENST00000489081 WASHC2CQ9Y4E1 1318 aa16.72■□□□□ 0.27
CMSS1-205ENST00000489081 PLA2R1Q13018 1463 aa16.71■□□□□ 0.27
CMSS1-205ENST00000489081 EFCAB6Q5THR3 1501 aa16.7■□□□□ 0.26
CMSS1-205ENST00000489081 RPRD2Q5VT52 1461 aaKnown RBP16.69■□□□□ 0.26
CMSS1-205ENST00000489081 TIMELESSQ9UNS1 1208 aa16.69■□□□□ 0.26
CMSS1-205ENST00000489081 ARID4BQ4LE39 1312 aaPredicted RBP16.69■□□□□ 0.26
CMSS1-205ENST00000489081 E9PCH4 1651 aa16.69■□□□□ 0.26
CMSS1-205ENST00000489081 CEP152O94986 1710 aa16.68■□□□□ 0.26
CMSS1-205ENST00000489081 PTPRTO14522 1441 aa16.68■□□□□ 0.26
CMSS1-205ENST00000489081 ZC3H13Q5T200 1668 aaKnown RBP16.67■□□□□ 0.26
CMSS1-205ENST00000489081 MLECQ14165 292 aa16.67■□□□□ 0.26
CMSS1-205ENST00000489081 NPATQ14207 1427 aa16.67■□□□□ 0.26
CMSS1-205ENST00000489081 ARHGAP31Q2M1Z3 1444 aa16.66■□□□□ 0.26
CMSS1-205ENST00000489081 CAMSAP1Q5T5Y3 1602 aa16.65■□□□□ 0.26
CMSS1-205ENST00000489081 TONSLQ96HA7 1378 aa16.64■□□□□ 0.26
CMSS1-205ENST00000489081 CCDC144AA2RUR9 1427 aa16.64■□□□□ 0.25
CMSS1-205ENST00000489081 TRPM2O94759 1503 aa16.64■□□□□ 0.25
CMSS1-205ENST00000489081 NOS1P29475 1434 aa16.61■□□□□ 0.25
CMSS1-205ENST00000489081 SPHKAPQ2M3C7 1700 aa16.6■□□□□ 0.25
CMSS1-205ENST00000489081 ESF1Q9H501 851 aaKnown RBP16.59■□□□□ 0.25
CMSS1-205ENST00000489081 CNTLNQ9NXG0 1405 aa16.59■□□□□ 0.25
CMSS1-205ENST00000489081 PPP1R15AO75807 674 aaPredicted RBP16.58■□□□□ 0.24
CMSS1-205ENST00000489081 L3MBTL2Q969R5 705 aa16.58■□□□□ 0.24
CMSS1-205ENST00000489081 CLTCQ00610 1675 aaKnown RBP16.58■□□□□ 0.24
CMSS1-205ENST00000489081 ZMYM3Q14202 1370 aa16.57■□□□□ 0.24
CMSS1-205ENST00000489081 CLTCL1P53675 1640 aa16.56■□□□□ 0.24
CMSS1-205ENST00000489081 ERVK-7P63135 1459 aa16.55■□□□□ 0.24
CMSS1-205ENST00000489081 SPATA31E1Q6ZUB1 1445 aa16.54■□□□□ 0.24
CMSS1-205ENST00000489081 FBXO31Q5XUX0 539 aaPredicted RBP16.54■□□□□ 0.24
CMSS1-205ENST00000489081 SYNMO15061 1565 aa16.54■□□□□ 0.24
CMSS1-205ENST00000489081 UGGT1Q9NYU2 1555 aa16.54■□□□□ 0.24
CMSS1-205ENST00000489081 PREX1Q8TCU6 1659 aa16.52■□□□□ 0.23
CMSS1-205ENST00000489081 SPATA31D1Q6ZQQ2 1576 aa16.51■□□□□ 0.23
CMSS1-205ENST00000489081 MROH2AA6NES4 1674 aa16.51■□□□□ 0.23
CMSS1-205ENST00000489081 RGL3Q3MIN7 710 aa16.51■□□□□ 0.23
CMSS1-205ENST00000489081 SLC52A1Q9NWF4 448 aa16.5■□□□□ 0.23
CMSS1-205ENST00000489081 NEURL4Q96JN8 1562 aa16.5■□□□□ 0.23
CMSS1-205ENST00000489081 PIK3C2BO00750 1634 aa16.49■□□□□ 0.23
CMSS1-205ENST00000489081 IDI1Q13907 227 aa16.48■□□□□ 0.23
CMSS1-205ENST00000489081 CFAP65Q6ZU64 1925 aaKnown RBP16.47■□□□□ 0.23
CMSS1-205ENST00000489081 FER1L4A9Z1Z3 1794 aa16.47■□□□□ 0.23
CMSS1-205ENST00000489081 ADGRB3O60242 1522 aa16.47■□□□□ 0.23
CMSS1-205ENST00000489081 DCAF11Q8TEB1 546 aa16.47■□□□□ 0.23
CMSS1-205ENST00000489081 ADAMTSL3P82987 1691 aa16.46■□□□□ 0.23
CMSS1-205ENST00000489081 NBPF8Q3BBV2 869 aa16.46■□□□□ 0.23
CMSS1-205ENST00000489081 UHRF1BP1Q6BDS2 1440 aa16.45■□□□□ 0.22
CMSS1-205ENST00000489081 MADDQ8WXG6 1647 aa16.45■□□□□ 0.22
CMSS1-205ENST00000489081 CEBPAP49715 358 aaPredicted RBP16.45■□□□□ 0.22
CMSS1-205ENST00000489081 TNRQ92752 1358 aa16.45■□□□□ 0.22
CMSS1-205ENST00000489081 CHGAP10645 457 aaKnown RBP16.44■□□□□ 0.22
CMSS1-205ENST00000489081 KDM2AQ9Y2K7 1162 aa16.44■□□□□ 0.22
CMSS1-205ENST00000489081 STAC3Q96MF2 364 aa16.43■□□□□ 0.22
CMSS1-205ENST00000489081 C3P01024 1663 aa16.43■□□□□ 0.22
CMSS1-205ENST00000489081 KIF1BO60333 1816 aa16.42■□□□□ 0.22
CMSS1-205ENST00000489081 NCBP3Q53F19 620 aaKnown RBP16.42■□□□□ 0.22
CMSS1-205ENST00000489081 PRAG1Q86YV5 1406 aa16.41■□□□□ 0.22
CMSS1-205ENST00000489081 RPGRIP1LQ68CZ1 1315 aa16.41■□□□□ 0.22
CMSS1-205ENST00000489081 RIMS1Q86UR5 1692 aaKnown RBP16.4■□□□□ 0.22
CMSS1-205ENST00000489081 ZNF326Q5BKZ1 582 aaKnown RBP16.4■□□□□ 0.22
CMSS1-205ENST00000489081 TMEM131LA2VDJ0 1609 aa16.39■□□□□ 0.21
CMSS1-205ENST00000489081 SCAF1Q9H7N4 1312 aaKnown RBP16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 106.2 ms