RNA–Protein interactions for RNA: ENST00000488489.5

NECAB3-213, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 2

Gene NECAB3, Length 2,142 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-213ENST00000488489 KDM5CP41229 1560 aa28.93■■■□□ 2.22
NECAB3-213ENST00000488489 DHX29Q7Z478 1369 aaKnown RBP28.9■■■□□ 2.22
NECAB3-213ENST00000488489 PELP1Q8IZL8 1130 aaKnown RBP28.89■■■□□ 2.22
NECAB3-213ENST00000488489 RAPGEF3O95398 923 aa28.88■■■□□ 2.21
NECAB3-213ENST00000488489 MLH3Q9UHC1 1453 aa28.87■■■□□ 2.21
NECAB3-213ENST00000488489 DEPDC5O75140 1603 aa28.85■■■□□ 2.21
NECAB3-213ENST00000488489 KIF3BO15066 747 aa28.84■■■□□ 2.21
NECAB3-213ENST00000488489 HECW2Q9P2P5 1572 aa28.83■■■□□ 2.21
NECAB3-213ENST00000488489 PLA2R1Q13018 1463 aa28.83■■■□□ 2.21
NECAB3-213ENST00000488489 EIF2AK4Q9P2K8 1649 aaKnown RBP28.81■■■□□ 2.2
NECAB3-213ENST00000488489 NBPF8Q3BBV2 869 aa28.81■■■□□ 2.2
NECAB3-213ENST00000488489 HIRIP3Q9BW71 556 aaPredicted RBP28.8■■■□□ 2.2
NECAB3-213ENST00000488489 A2MP01023 1474 aa28.8■■■□□ 2.2
NECAB3-213ENST00000488489 RICTORQ6R327 1708 aa28.79■■■□□ 2.2
NECAB3-213ENST00000488489 TSPOAP1O95153 1857 aa28.78■■■□□ 2.2
NECAB3-213ENST00000488489 PPRC1Q5VV67 1664 aaKnown RBP28.78■■■□□ 2.2
NECAB3-213ENST00000488489 MROH1Q8NDA8 1641 aa28.77■■■□□ 2.2
NECAB3-213ENST00000488489 ABCA6Q8N139 1617 aa28.76■■■□□ 2.19
NECAB3-213ENST00000488489 FRMPD1Q5SYB0 1578 aa28.76■■■□□ 2.19
NECAB3-213ENST00000488489 VWDEQ8N2E2 1590 aa28.76■■■□□ 2.19
NECAB3-213ENST00000488489 CCDC144AA2RUR9 1427 aa28.74■■■□□ 2.19
NECAB3-213ENST00000488489 PRDM15P57071 1507 aaPredicted RBP28.74■■■□□ 2.19
NECAB3-213ENST00000488489 ATP10AO60312 1499 aa28.73■■■□□ 2.19
NECAB3-213ENST00000488489 E9PCH4 1651 aa28.73■■■□□ 2.19
NECAB3-213ENST00000488489 KIF13AQ9H1H9 1805 aa28.71■■■□□ 2.19
NECAB3-213ENST00000488489 KANK1Q14678 1352 aa28.71■■■□□ 2.19
NECAB3-213ENST00000488489 CENPBP07199 599 aaPredicted RBP28.7■■■□□ 2.18
NECAB3-213ENST00000488489 TET3O43151 1660 aa28.68■■■□□ 2.18
NECAB3-213ENST00000488489 DIP2CQ9Y2E4 1556 aa28.68■■■□□ 2.18
NECAB3-213ENST00000488489 RNF17Q9BXT8 1623 aaKnown RBP28.66■■■□□ 2.18
NECAB3-213ENST00000488489 YEATS2Q9ULM3 1422 aa28.66■■■□□ 2.18
NECAB3-213ENST00000488489 MIER1Q8N108 512 aa28.66■■■□□ 2.18
NECAB3-213ENST00000488489 HSPA5P11021 654 aaKnown RBP28.62■■■□□ 2.17
NECAB3-213ENST00000488489 ZNF326Q5BKZ1 582 aaKnown RBP28.62■■■□□ 2.17
NECAB3-213ENST00000488489 DCAF11Q8TEB1 546 aa28.62■■■□□ 2.17
NECAB3-213ENST00000488489 BCORL1Q5H9F3 1711 aa28.62■■■□□ 2.17
NECAB3-213ENST00000488489 PTPRTO14522 1441 aa28.61■■■□□ 2.17
NECAB3-213ENST00000488489 UHRF1BP1Q6BDS2 1440 aa28.61■■■□□ 2.17
NECAB3-213ENST00000488489 KDM2AQ9Y2K7 1162 aa28.6■■■□□ 2.17
NECAB3-213ENST00000488489 GGT6Q6P531 493 aa28.6■■■□□ 2.17
NECAB3-213ENST00000488489 ZMYM4Q5VZL5 1548 aa28.59■■■□□ 2.17
NECAB3-213ENST00000488489 EIF4G2P78344 907 aaKnown RBP eCLIP28.59■■■□□ 2.172e-6■■■■□ 22.4
NECAB3-213ENST00000488489 RGL3Q3MIN7 710 aa28.59■■■□□ 2.17
NECAB3-213ENST00000488489 SPHKAPQ2M3C7 1700 aa28.58■■■□□ 2.17
NECAB3-213ENST00000488489 TRPM2O94759 1503 aa28.58■■■□□ 2.17
NECAB3-213ENST00000488489 LMTK2Q8IWU2 1503 aa28.57■■■□□ 2.16
NECAB3-213ENST00000488489 CEP152O94986 1710 aa28.56■■■□□ 2.16
NECAB3-213ENST00000488489 EFCAB6Q5THR3 1501 aa28.56■■■□□ 2.16
NECAB3-213ENST00000488489 DDX10Q13206 875 aaKnown RBP28.54■■■□□ 2.16
NECAB3-213ENST00000488489 COL17A1Q9UMD9 1497 aaPredicted RBP28.53■■■□□ 2.16
NECAB3-213ENST00000488489 SPATA31E1Q6ZUB1 1445 aa28.52■■■□□ 2.16
NECAB3-213ENST00000488489 CLTCL1P53675 1640 aa28.51■■■□□ 2.15
NECAB3-213ENST00000488489 RALGAPBQ86X10 1494 aa28.49■■■□□ 2.15
NECAB3-213ENST00000488489 DNAJC5Q9H3Z4 198 aa28.49■■■□□ 2.15
NECAB3-213ENST00000488489 WASHC2CQ9Y4E1 1318 aa28.48■■■□□ 2.15
NECAB3-213ENST00000488489 ABCC3O15438 1527 aa28.48■■■□□ 2.15
NECAB3-213ENST00000488489 GTF3C3Q9Y5Q9 886 aa28.46■■■□□ 2.15
NECAB3-213ENST00000488489 PRAG1Q86YV5 1406 aa28.46■■■□□ 2.15
NECAB3-213ENST00000488489 NPATQ14207 1427 aa28.46■■■□□ 2.15
NECAB3-213ENST00000488489 UGGT1Q9NYU2 1555 aa28.44■■■□□ 2.14
NECAB3-213ENST00000488489 WASHC2AQ641Q2 1341 aa28.43■■■□□ 2.14
NECAB3-213ENST00000488489 CFAP65Q6ZU64 1925 aaKnown RBP28.42■■■□□ 2.14
NECAB3-213ENST00000488489 C11orf95C9JLR9 678 aaPredicted RBP28.42■■■□□ 2.14
NECAB3-213ENST00000488489 USP47Q96K76 1375 aa28.41■■■□□ 2.14
NECAB3-213ENST00000488489 CARD11Q9BXL7 1154 aa28.39■■■□□ 2.14
NECAB3-213ENST00000488489 CAMSAP1Q5T5Y3 1602 aa28.39■■■□□ 2.13
NECAB3-213ENST00000488489 TRPM1Q7Z4N2 1603 aa28.38■■■□□ 2.13
NECAB3-213ENST00000488489 REREQ9P2R6 1566 aa28.36■■■□□ 2.13
NECAB3-213ENST00000488489 ROCK2O75116 1388 aaKnown RBP28.35■■■□□ 2.13
NECAB3-213ENST00000488489 NBPF1Q3BBV0 1214 aa28.34■■■□□ 2.13
NECAB3-213ENST00000488489 SIGLEC1Q9BZZ2 1709 aa28.34■■■□□ 2.13
NECAB3-213ENST00000488489 NEURL4Q96JN8 1562 aa28.33■■■□□ 2.13
NECAB3-213ENST00000488489 ZC3H13Q5T200 1668 aaKnown RBP28.33■■■□□ 2.13
NECAB3-213ENST00000488489 AGLP35573 1532 aa28.31■■■□□ 2.12
NECAB3-213ENST00000488489 CCDC7Q96M83 1385 aa28.31■■■□□ 2.12
NECAB3-213ENST00000488489 CNTLNQ9NXG0 1405 aa28.31■■■□□ 2.12
NECAB3-213ENST00000488489 KIF1BO60333 1816 aa28.31■■■□□ 2.12
NECAB3-213ENST00000488489 ARHGEF40Q8TER5 1519 aa28.3■■■□□ 2.12
NECAB3-213ENST00000488489 ARHGAP31Q2M1Z3 1444 aa28.3■■■□□ 2.12
NECAB3-213ENST00000488489 NOS1P29475 1434 aa28.29■■■□□ 2.12
NECAB3-213ENST00000488489 GPRASP1Q5JY77 1395 aa28.29■■■□□ 2.12
NECAB3-213ENST00000488489 MADDQ8WXG6 1647 aa28.27■■■□□ 2.12
NECAB3-213ENST00000488489 KIF7Q2M1P5 1343 aa28.27■■■□□ 2.12
NECAB3-213ENST00000488489 MROH2AA6NES4 1674 aa28.27■■■□□ 2.12
NECAB3-213ENST00000488489 ST20-MTHFSA0A0A6YYL1 179 aa28.25■■■□□ 2.11
NECAB3-213ENST00000488489 STAC3Q96MF2 364 aa28.25■■■□□ 2.11
NECAB3-213ENST00000488489 POLR1AO95602 1720 aaPredicted RBP28.25■■■□□ 2.11
NECAB3-213ENST00000488489 SYNMO15061 1565 aa28.23■■■□□ 2.11
NECAB3-213ENST00000488489 ADGRB3O60242 1522 aa28.23■■■□□ 2.11
NECAB3-213ENST00000488489 TRHP20396 242 aaPredicted RBP28.21■■■□□ 2.11
NECAB3-213ENST00000488489 LAMC1P11047 1609 aa28.2■■■□□ 2.11
NECAB3-213ENST00000488489 PIK3C2BO00750 1634 aa28.19■■■□□ 2.1
NECAB3-213ENST00000488489 CHGAP10645 457 aaKnown RBP28.19■■■□□ 2.1
NECAB3-213ENST00000488489 IFT172Q9UG01 1749 aa28.18■■■□□ 2.1
NECAB3-213ENST00000488489 PPP6R1Q9UPN7 881 aa28.18■■■□□ 2.1
NECAB3-213ENST00000488489 MLECQ14165 292 aa28.18■■■□□ 2.1
NECAB3-213ENST00000488489 ADGRF5Q8IZF2 1346 aa28.16■■■□□ 2.1
NECAB3-213ENST00000488489 MYOM2P54296 1465 aa28.16■■■□□ 2.1
NECAB3-213ENST00000488489 YTHDC1Q96MU7 727 aaKnown RBP28.16■■■□□ 2.1
NECAB3-213ENST00000488489 FBXO31Q5XUX0 539 aaPredicted RBP28.15■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms