RNA–Protein interactions for RNA: ENST00000488353.2

RER1-207, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RER1, Length 2,469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-207ENST00000488353 SYCP2Q9BX26 1530 aa19.18■□□□□ 0.66
RER1-207ENST00000488353 KIAA1107Q9UPP5 1409 aa19.18■□□□□ 0.66
RER1-207ENST00000488353 POLR3GLQ9BT43 218 aa19.17■□□□□ 0.66
RER1-207ENST00000488353 ZCCHC11Q5TAX3 1644 aaKnown RBP19.15■□□□□ 0.66
RER1-207ENST00000488353 SALL2Q9Y467 1007 aaPredicted RBP19.15■□□□□ 0.66
RER1-207ENST00000488353 SPATA31E1Q6ZUB1 1445 aa19.13■□□□□ 0.65
RER1-207ENST00000488353 CCDC136Q96JN2 1154 aa19.12■□□□□ 0.65
RER1-207ENST00000488353 MYO5CQ9NQX4 1742 aa19.11■□□□□ 0.65
RER1-207ENST00000488353 RSPH4AQ5TD94 716 aa19.1■□□□□ 0.65
RER1-207ENST00000488353 SMG6Q86US8 1419 aaKnown RBP19.1■□□□□ 0.65
RER1-207ENST00000488353 UHRF1BP1LA0JNW5 1464 aa19.1■□□□□ 0.65
RER1-207ENST00000488353 RNF123Q5XPI4 1314 aa19.08■□□□□ 0.64
RER1-207ENST00000488353 POLR1AO95602 1720 aaPredicted RBP19.08■□□□□ 0.64
RER1-207ENST00000488353 IL27Q8NEV9 243 aa19.08■□□□□ 0.64
RER1-207ENST00000488353 ARHGEF12Q9NZN5 1544 aa19.08■□□□□ 0.64
RER1-207ENST00000488353 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.06■□□□□ 0.64
RER1-207ENST00000488353 PLCH2O75038 1416 aa19.05■□□□□ 0.64
RER1-207ENST00000488353 KDM5DQ9BY66 1539 aa19.05■□□□□ 0.64
RER1-207ENST00000488353 SENP3-EIF4A1A0A087X0R7 540 aa19.05■□□□□ 0.64
RER1-207ENST00000488353 USP35Q9P2H5 1018 aa19.05■□□□□ 0.64
RER1-207ENST00000488353 NUDCQ9Y266 331 aa19.05■□□□□ 0.64
RER1-207ENST00000488353 USP47Q96K76 1375 aa19.04■□□□□ 0.64
RER1-207ENST00000488353 EFCAB2Q5VUJ9 269 aa19.03■□□□□ 0.64
RER1-207ENST00000488353 BCORL1Q5H9F3 1711 aa19.03■□□□□ 0.64
RER1-207ENST00000488353 FAM135AQ9P2D6 1515 aa19.02■□□□□ 0.64
RER1-207ENST00000488353 PLEKHH2Q8IVE3 1493 aa19.02■□□□□ 0.64
RER1-207ENST00000488353 MAST1Q9Y2H9 1570 aa19.01■□□□□ 0.63
RER1-207ENST00000488353 TRAPPC8Q9Y2L5 1435 aa18.99■□□□□ 0.63
RER1-207ENST00000488353 KDM2AQ9Y2K7 1162 aa18.99■□□□□ 0.63
RER1-207ENST00000488353 DHX29Q7Z478 1369 aaKnown RBP18.99■□□□□ 0.63
RER1-207ENST00000488353 RTN4Q9NQC3 1192 aaKnown RBP18.97■□□□□ 0.63
RER1-207ENST00000488353 ABCC1P33527 1531 aa18.97■□□□□ 0.63
RER1-207ENST00000488353 OSCARQ8IYS5 282 aa18.96■□□□□ 0.63
RER1-207ENST00000488353 AFAP1Q8N556 730 aa18.96■□□□□ 0.63
RER1-207ENST00000488353 PLXNC1O60486 1568 aa18.96■□□□□ 0.63
RER1-207ENST00000488353 NEFMP07197 916 aa18.96■□□□□ 0.63
RER1-207ENST00000488353 WDR7Q9Y4E6 1490 aa18.96■□□□□ 0.63
RER1-207ENST00000488353 CARD11Q9BXL7 1154 aa18.95■□□□□ 0.62
RER1-207ENST00000488353 DCAF11Q8TEB1 546 aa18.95■□□□□ 0.62
RER1-207ENST00000488353 WASHC2CQ9Y4E1 1318 aa18.94■□□□□ 0.62
RER1-207ENST00000488353 UNC13BO14795 1591 aa18.93■□□□□ 0.62
RER1-207ENST00000488353 KDM5CP41229 1560 aa18.93■□□□□ 0.62
RER1-207ENST00000488353 DUOX2Q9NRD8 1548 aa18.93■□□□□ 0.62
RER1-207ENST00000488353 PPM1GO15355 546 aaPredicted RBP18.92■□□□□ 0.62
RER1-207ENST00000488353 TCERG1O14776 1098 aaKnown RBP18.92■□□□□ 0.62
RER1-207ENST00000488353 RGL3Q3MIN7 710 aa18.91■□□□□ 0.62
RER1-207ENST00000488353 CCDC144AA2RUR9 1427 aa18.91■□□□□ 0.62
RER1-207ENST00000488353 SPAG9O60271 1321 aaKnown RBP18.91■□□□□ 0.62
RER1-207ENST00000488353 ST20-MTHFSA0A0A6YYL1 179 aa18.9■□□□□ 0.62
RER1-207ENST00000488353 NPM2Q86SE8 214 aaKnown RBP18.9■□□□□ 0.62
RER1-207ENST00000488353 PLA2R1Q13018 1463 aa18.89■□□□□ 0.62
RER1-207ENST00000488353 UHRF1BP1Q6BDS2 1440 aa18.89■□□□□ 0.62
RER1-207ENST00000488353 TMC1Q8TDI8 760 aa18.89■□□□□ 0.61
RER1-207ENST00000488353 ASXL2Q76L83 1435 aa18.88■□□□□ 0.61
RER1-207ENST00000488353 ERBINQ96RT1 1412 aa18.88■□□□□ 0.61
RER1-207ENST00000488353 LAS1LQ9Y4W2 734 aaKnown RBP18.88■□□□□ 0.61
RER1-207ENST00000488353 FANCAO15360 1455 aa18.88■□□□□ 0.61
RER1-207ENST00000488353 IQGAP3Q86VI3 1631 aa18.87■□□□□ 0.61
RER1-207ENST00000488353 RALGAPBQ86X10 1494 aa18.87■□□□□ 0.61
RER1-207ENST00000488353 UBE2Q2Q8WVN8 375 aa18.86■□□□□ 0.61
RER1-207ENST00000488353 PDE4AP27815 886 aa18.86■□□□□ 0.61
RER1-207ENST00000488353 PNISRQ8TF01 805 aaKnown RBP18.86■□□□□ 0.61
RER1-207ENST00000488353 ARID4BQ4LE39 1312 aaPredicted RBP18.86■□□□□ 0.61
RER1-207ENST00000488353 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.85■□□□□ 0.61
RER1-207ENST00000488353 ARAP3Q8WWN8 1544 aa18.85■□□□□ 0.61
RER1-207ENST00000488353 MS4A1P11836 297 aa18.84■□□□□ 0.61
RER1-207ENST00000488353 ZFYVE16Q7Z3T8 1539 aa18.84■□□□□ 0.61
RER1-207ENST00000488353 BACH2Q9BYV9 841 aa18.83■□□□□ 0.61
RER1-207ENST00000488353 MAGI2Q86UL8 1455 aa18.83■□□□□ 0.61
RER1-207ENST00000488353 ABCA9Q8IUA7 1624 aa18.83■□□□□ 0.61
RER1-207ENST00000488353 ROCK2O75116 1388 aaKnown RBP18.82■□□□□ 0.6
RER1-207ENST00000488353 SCAPERQ9BY12 1400 aa18.81■□□□□ 0.6
RER1-207ENST00000488353 ADGRL1O94910 1474 aa18.81■□□□□ 0.6
RER1-207ENST00000488353 NPM1P06748 294 aaKnown RBP eCLIP18.8■□□□□ 0.6
RER1-207ENST00000488353 RTEL1-TNFRSF6BF6WH68 1400 aa18.8■□□□□ 0.6
RER1-207ENST00000488353 GSE1Q14687 1217 aa18.79■□□□□ 0.6
RER1-207ENST00000488353 A2MP01023 1474 aa18.79■□□□□ 0.6
RER1-207ENST00000488353 PRAG1Q86YV5 1406 aa18.78■□□□□ 0.6
RER1-207ENST00000488353 RRP1P56182 461 aaKnown RBP18.78■□□□□ 0.6
RER1-207ENST00000488353 NBPF1Q3BBV0 1214 aa18.78■□□□□ 0.6
RER1-207ENST00000488353 ATP7AQ04656 1500 aa18.77■□□□□ 0.6
RER1-207ENST00000488353 DDRGK1Q96HY6 314 aa18.77■□□□□ 0.6
RER1-207ENST00000488353 EXOC6Q8TAG9 804 aa18.76■□□□□ 0.59
RER1-207ENST00000488353 KIF3BO15066 747 aa18.75■□□□□ 0.59
RER1-207ENST00000488353 MYBBP1AQ9BQG0 1328 aaKnown RBP18.75■□□□□ 0.59
RER1-207ENST00000488353 INO80Q9ULG1 1556 aaPredicted RBP18.75■□□□□ 0.59
RER1-207ENST00000488353 BRPF3Q9ULD4 1205 aa18.74■□□□□ 0.59
RER1-207ENST00000488353 TRPM1Q7Z4N2 1603 aa18.73■□□□□ 0.59
RER1-207ENST00000488353 ATP10AO60312 1499 aa18.73■□□□□ 0.59
RER1-207ENST00000488353 E9PCH4 1651 aa18.73■□□□□ 0.59
RER1-207ENST00000488353 RALBP1Q15311 655 aa18.73■□□□□ 0.59
RER1-207ENST00000488353 BRD4O60885 1362 aaPredicted RBP18.71■□□□□ 0.59
RER1-207ENST00000488353 RCAN3Q9UKA8 241 aa18.71■□□□□ 0.58
RER1-207ENST00000488353 LRPPRCP42704 1394 aaKnown RBP18.7■□□□□ 0.58
RER1-207ENST00000488353 CD109Q6YHK3 1445 aa18.69■□□□□ 0.58
RER1-207ENST00000488353 NFKBIBQ15653 356 aa18.68■□□□□ 0.58
RER1-207ENST00000488353 DEPDC5O75140 1603 aa18.68■□□□□ 0.58
RER1-207ENST00000488353 KANK1Q14678 1352 aa18.67■□□□□ 0.58
RER1-207ENST00000488353 CC2D1BQ5T0F9 858 aaKnown RBP18.66■□□□□ 0.58
RER1-207ENST00000488353 EIF5BO60841 1220 aaKnown RBP18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms