RNA–Protein interactions for RNA: ENST00000488214.1

PDAP1-203, Transcript of PDGFA associated protein 1, humanhuman

TSL 3

Gene PDAP1, Length 274 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-203ENST00000488214 PRDM15P57071 1507 aaPredicted RBP10.15□□□□□ -0.78
PDAP1-203ENST00000488214 ARHGEF40Q8TER5 1519 aa10.15□□□□□ -0.78
PDAP1-203ENST00000488214 MROH1Q8NDA8 1641 aa10.15□□□□□ -0.79
PDAP1-203ENST00000488214 ACIN1Q9UKV3 1341 aaKnown RBP10.14□□□□□ -0.79
PDAP1-203ENST00000488214 DNAJC5Q9H3Z4 198 aa10.14□□□□□ -0.79
PDAP1-203ENST00000488214 A2MP01023 1474 aa10.14□□□□□ -0.79
PDAP1-203ENST00000488214 TET3O43151 1660 aa10.13□□□□□ -0.79
PDAP1-203ENST00000488214 NUP155O75694 1391 aa10.13□□□□□ -0.79
PDAP1-203ENST00000488214 RAPGEF3O95398 923 aa10.12□□□□□ -0.79
PDAP1-203ENST00000488214 E9PCH4 1651 aa10.12□□□□□ -0.79
PDAP1-203ENST00000488214 SPHKAPQ2M3C7 1700 aa10.11□□□□□ -0.79
PDAP1-203ENST00000488214 ZC3H13Q5T200 1668 aaKnown RBP10.11□□□□□ -0.79
PDAP1-203ENST00000488214 VWDEQ8N2E2 1590 aa10.1□□□□□ -0.79
PDAP1-203ENST00000488214 YEATS2Q9ULM3 1422 aa10.1□□□□□ -0.79
PDAP1-203ENST00000488214 MPHOSPH9Q99550 1183 aa10.1□□□□□ -0.79
PDAP1-203ENST00000488214 SLC4A1APQ9BWU0 796 aaKnown RBP10.1□□□□□ -0.79
PDAP1-203ENST00000488214 SIGLEC1Q9BZZ2 1709 aa10.1□□□□□ -0.79
PDAP1-203ENST00000488214 REREQ9P2R6 1566 aa10.09□□□□□ -0.79
PDAP1-203ENST00000488214 CAMSAP1Q5T5Y3 1602 aa10.09□□□□□ -0.79
PDAP1-203ENST00000488214 DHX29Q7Z478 1369 aaKnown RBP10.09□□□□□ -0.79
PDAP1-203ENST00000488214 EFCAB6Q5THR3 1501 aa10.08□□□□□ -0.8
PDAP1-203ENST00000488214 FOXD1Q16676 465 aa10.08□□□□□ -0.8
PDAP1-203ENST00000488214 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.08□□□□□ -0.84e-7■■■■■ 29.7
PDAP1-203ENST00000488214 COL17A1Q9UMD9 1497 aaPredicted RBP10.07□□□□□ -0.8
PDAP1-203ENST00000488214 NEUROD1Q13562 356 aa10.07□□□□□ -0.8
PDAP1-203ENST00000488214 SIN3AQ96ST3 1273 aa10.07□□□□□ -0.8
PDAP1-203ENST00000488214 KANK1Q14678 1352 aa10.06□□□□□ -0.8
PDAP1-203ENST00000488214 TONSLQ96HA7 1378 aa10.06□□□□□ -0.8
PDAP1-203ENST00000488214 TRHP20396 242 aaPredicted RBP10.06□□□□□ -0.8
PDAP1-203ENST00000488214 ATP10AO60312 1499 aa10.05□□□□□ -0.8
PDAP1-203ENST00000488214 RPRD2Q5VT52 1461 aaKnown RBP10.05□□□□□ -0.8
PDAP1-203ENST00000488214 ANKRD30BQ9BXX2 1392 aa10.05□□□□□ -0.8
PDAP1-203ENST00000488214 KIF3BO15066 747 aa10.05□□□□□ -0.8
PDAP1-203ENST00000488214 PKD2Q13563 968 aa10.05□□□□□ -0.8
PDAP1-203ENST00000488214 ABCC3O15438 1527 aa10.05□□□□□ -0.8
PDAP1-203ENST00000488214 TRPM2O94759 1503 aa10.04□□□□□ -0.8
PDAP1-203ENST00000488214 LMTK2Q8IWU2 1503 aa10.04□□□□□ -0.8
PDAP1-203ENST00000488214 CLTCQ00610 1675 aaKnown RBP10.03□□□□□ -0.8
PDAP1-203ENST00000488214 CFAP65Q6ZU64 1925 aaKnown RBP10.03□□□□□ -0.8
PDAP1-203ENST00000488214 CLTCL1P53675 1640 aa10.03□□□□□ -0.8
PDAP1-203ENST00000488214 AGLP35573 1532 aa10.02□□□□□ -0.8
PDAP1-203ENST00000488214 KIF1BO60333 1816 aa10.02□□□□□ -0.81
PDAP1-203ENST00000488214 MROH2AA6NES4 1674 aa10.01□□□□□ -0.81
PDAP1-203ENST00000488214 CCDC144AA2RUR9 1427 aa10□□□□□ -0.81
PDAP1-203ENST00000488214 PREX1Q8TCU6 1659 aa10□□□□□ -0.81
PDAP1-203ENST00000488214 FER1L4A9Z1Z3 1794 aa9.98□□□□□ -0.81
PDAP1-203ENST00000488214 PLA2R1Q13018 1463 aa9.98□□□□□ -0.81
PDAP1-203ENST00000488214 UGGT1Q9NYU2 1555 aa9.98□□□□□ -0.81
PDAP1-203ENST00000488214 GGT6Q6P531 493 aa9.98□□□□□ -0.81
PDAP1-203ENST00000488214 TIMELESSQ9UNS1 1208 aa9.97□□□□□ -0.81
PDAP1-203ENST00000488214 NPATQ14207 1427 aa9.97□□□□□ -0.81
PDAP1-203ENST00000488214 SYNMO15061 1565 aa9.97□□□□□ -0.81
PDAP1-203ENST00000488214 IFT172Q9UG01 1749 aa9.96□□□□□ -0.81
PDAP1-203ENST00000488214 PIK3C2BO00750 1634 aa9.96□□□□□ -0.82
PDAP1-203ENST00000488214 PTPRTO14522 1441 aa9.95□□□□□ -0.82
PDAP1-203ENST00000488214 MYO5BQ9ULV0 1848 aa9.95□□□□□ -0.82
PDAP1-203ENST00000488214 ADGRB3O60242 1522 aa9.94□□□□□ -0.82
PDAP1-203ENST00000488214 WASHC2CQ9Y4E1 1318 aa9.94□□□□□ -0.82
PDAP1-203ENST00000488214 CNTLNQ9NXG0 1405 aa9.93□□□□□ -0.82
PDAP1-203ENST00000488214 TRPM1Q7Z4N2 1603 aa9.93□□□□□ -0.82
PDAP1-203ENST00000488214 MADDQ8WXG6 1647 aa9.93□□□□□ -0.82
PDAP1-203ENST00000488214 NEURL4Q96JN8 1562 aa9.92□□□□□ -0.82
PDAP1-203ENST00000488214 ARHGAP31Q2M1Z3 1444 aa9.92□□□□□ -0.82
PDAP1-203ENST00000488214 MLECQ14165 292 aa9.92□□□□□ -0.82
PDAP1-203ENST00000488214 L3MBTL2Q969R5 705 aa9.92□□□□□ -0.82
PDAP1-203ENST00000488214 PPLO60437 1756 aa9.92□□□□□ -0.82
PDAP1-203ENST00000488214 ARID4BQ4LE39 1312 aaPredicted RBP9.91□□□□□ -0.82
PDAP1-203ENST00000488214 PPP1R15AO75807 674 aaPredicted RBP9.91□□□□□ -0.82
PDAP1-203ENST00000488214 ERVK-7P63135 1459 aa9.91□□□□□ -0.82
PDAP1-203ENST00000488214 NOS1P29475 1434 aa9.9□□□□□ -0.82
PDAP1-203ENST00000488214 SPATA31E1Q6ZUB1 1445 aa9.9□□□□□ -0.82
PDAP1-203ENST00000488214 C3P01024 1663 aa9.9□□□□□ -0.82
PDAP1-203ENST00000488214 RIMS1Q86UR5 1692 aaKnown RBP9.9□□□□□ -0.82
PDAP1-203ENST00000488214 SPATA31D1Q6ZQQ2 1576 aa9.9□□□□□ -0.82
PDAP1-203ENST00000488214 ZNF326Q5BKZ1 582 aaKnown RBP9.89□□□□□ -0.83
PDAP1-203ENST00000488214 RALGAPBQ86X10 1494 aa9.89□□□□□ -0.83
PDAP1-203ENST00000488214 POLR1AO95602 1720 aaPredicted RBP9.88□□□□□ -0.83
PDAP1-203ENST00000488214 UHRF1BP1Q6BDS2 1440 aa9.88□□□□□ -0.83
PDAP1-203ENST00000488214 TMEM131LA2VDJ0 1609 aa9.87□□□□□ -0.83
PDAP1-203ENST00000488214 LAMC1P11047 1609 aa9.87□□□□□ -0.83
PDAP1-203ENST00000488214 PRAG1Q86YV5 1406 aa9.87□□□□□ -0.83
PDAP1-203ENST00000488214 MYOM2P54296 1465 aa9.86□□□□□ -0.83
PDAP1-203ENST00000488214 ZNF316A6NFI3 1004 aaPredicted RBP9.86□□□□□ -0.83
PDAP1-203ENST00000488214 RGL3Q3MIN7 710 aa9.86□□□□□ -0.83
PDAP1-203ENST00000488214 SENP3Q9H4L4 574 aaPredicted RBP9.86□□□□□ -0.83
PDAP1-203ENST00000488214 ESF1Q9H501 851 aaKnown RBP9.86□□□□□ -0.83
PDAP1-203ENST00000488214 KIAA1210Q9ULL0 1709 aa9.86□□□□□ -0.83
PDAP1-203ENST00000488214 NBPF8Q3BBV2 869 aa9.85□□□□□ -0.83
PDAP1-203ENST00000488214 DCAF11Q8TEB1 546 aa9.85□□□□□ -0.83
PDAP1-203ENST00000488214 PPP6R1Q9UPN7 881 aa9.85□□□□□ -0.83
PDAP1-203ENST00000488214 NEXMIFQ5QGS0 1516 aa9.85□□□□□ -0.83
PDAP1-203ENST00000488214 MYO3AQ8NEV4 1616 aa9.85□□□□□ -0.83
PDAP1-203ENST00000488214 IQGAP1P46940 1657 aa9.84□□□□□ -0.83
PDAP1-203ENST00000488214 ADAMTSL3P82987 1691 aa9.84□□□□□ -0.83
PDAP1-203ENST00000488214 KDM2AQ9Y2K7 1162 aa9.84□□□□□ -0.83
PDAP1-203ENST00000488214 KDM5AP29375 1690 aaKnown RBP9.83□□□□□ -0.84
PDAP1-203ENST00000488214 UBR1Q8IWV7 1749 aa9.83□□□□□ -0.84
PDAP1-203ENST00000488214 CHGAP10645 457 aaKnown RBP9.83□□□□□ -0.84
PDAP1-203ENST00000488214 ROCK2O75116 1388 aaKnown RBP9.81□□□□□ -0.84
PDAP1-203ENST00000488214 ZMYM3Q14202 1370 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms