RNA–Protein interactions for RNA: ENST00000486263.1

NELFCD-209, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 2

Gene NELFCD, Length 708 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-209ENST00000486263 RAB3GAP2Q9H2M9 1393 aa20.63■□□□□ 0.89
NELFCD-209ENST00000486263 MLECQ14165 292 aa20.63■□□□□ 0.89
NELFCD-209ENST00000486263 FER1L4A9Z1Z3 1794 aa20.63■□□□□ 0.89
NELFCD-209ENST00000486263 ERBINQ96RT1 1412 aa20.61■□□□□ 0.89
NELFCD-209ENST00000486263 ACIN1Q9UKV3 1341 aaKnown RBP20.61■□□□□ 0.89
NELFCD-209ENST00000486263 TRIM52Q96A61 297 aa20.6■□□□□ 0.89
NELFCD-209ENST00000486263 KIF3BO15066 747 aa20.59■□□□□ 0.89
NELFCD-209ENST00000486263 HRCP23327 699 aa20.59■□□□□ 0.89
NELFCD-209ENST00000486263 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.56■□□□□ 0.881e-31■□□□□ 10.5
NELFCD-209ENST00000486263 SETD1BQ9UPS6 1966 aaKnown RBP20.54■□□□□ 0.88
NELFCD-209ENST00000486263 CNTLNQ9NXG0 1405 aa20.53■□□□□ 0.88
NELFCD-209ENST00000486263 GGT6Q6P531 493 aa20.53■□□□□ 0.88
NELFCD-209ENST00000486263 PPP6R1Q9UPN7 881 aa20.53■□□□□ 0.88
NELFCD-209ENST00000486263 EIF2AK4Q9P2K8 1649 aaKnown RBP20.53■□□□□ 0.88
NELFCD-209ENST00000486263 ESF1Q9H501 851 aaKnown RBP20.52■□□□□ 0.88
NELFCD-209ENST00000486263 KANK1Q14678 1352 aa20.51■□□□□ 0.87
NELFCD-209ENST00000486263 NUP155O75694 1391 aa20.5■□□□□ 0.87
NELFCD-209ENST00000486263 MROH2AA6NES4 1674 aa20.45■□□□□ 0.86
NELFCD-209ENST00000486263 SLC4A1APQ9BWU0 796 aaKnown RBP20.45■□□□□ 0.86
NELFCD-209ENST00000486263 LMTK3Q96Q04 1460 aa20.44■□□□□ 0.86
NELFCD-209ENST00000486263 UNC13BO14795 1591 aa20.44■□□□□ 0.86
NELFCD-209ENST00000486263 C3P01024 1663 aa20.43■□□□□ 0.86
NELFCD-209ENST00000486263 CEBPAP49715 358 aaPredicted RBP20.43■□□□□ 0.86
NELFCD-209ENST00000486263 WASHC2CQ9Y4E1 1318 aa20.43■□□□□ 0.86
NELFCD-209ENST00000486263 FAM135AQ9P2D6 1515 aa20.43■□□□□ 0.86
NELFCD-209ENST00000486263 RNF17Q9BXT8 1623 aaKnown RBP20.42■□□□□ 0.86
NELFCD-209ENST00000486263 PLPPR3Q6T4P5 718 aa20.42■□□□□ 0.86
NELFCD-209ENST00000486263 MPHOSPH9Q99550 1183 aa20.41■□□□□ 0.86
NELFCD-209ENST00000486263 DEPDC5O75140 1603 aa20.41■□□□□ 0.86
NELFCD-209ENST00000486263 ZMYM3Q14202 1370 aa20.4■□□□□ 0.86
NELFCD-209ENST00000486263 PREX1Q8TCU6 1659 aa20.4■□□□□ 0.86
NELFCD-209ENST00000486263 PRDM15P57071 1507 aaPredicted RBP20.39■□□□□ 0.85
NELFCD-209ENST00000486263 CCER1Q8TC90 406 aaPredicted RBP20.39■□□□□ 0.85
NELFCD-209ENST00000486263 KDM5DQ9BY66 1539 aa20.38■□□□□ 0.85
NELFCD-209ENST00000486263 NPATQ14207 1427 aa20.38■□□□□ 0.85
NELFCD-209ENST00000486263 CLTCQ00610 1675 aaKnown RBP20.38■□□□□ 0.85
NELFCD-209ENST00000486263 IQGAP3Q86VI3 1631 aa20.36■□□□□ 0.85
NELFCD-209ENST00000486263 MROH1Q8NDA8 1641 aa20.36■□□□□ 0.85
NELFCD-209ENST00000486263 PKD2Q13563 968 aa20.36■□□□□ 0.85
NELFCD-209ENST00000486263 PZPP20742 1482 aa20.36■□□□□ 0.85
NELFCD-209ENST00000486263 UHRF1BP1Q6BDS2 1440 aa20.35■□□□□ 0.85
NELFCD-209ENST00000486263 DHX57Q6P158 1386 aaKnown RBP20.34■□□□□ 0.85
NELFCD-209ENST00000486263 VWDEQ8N2E2 1590 aa20.33■□□□□ 0.84
NELFCD-209ENST00000486263 ABCC3O15438 1527 aa20.32■□□□□ 0.84
NELFCD-209ENST00000486263 ZC3H13Q5T200 1668 aaKnown RBP20.31■□□□□ 0.84
NELFCD-209ENST00000486263 LMTK2Q8IWU2 1503 aa20.31■□□□□ 0.84
NELFCD-209ENST00000486263 CEP152O94986 1710 aa20.3■□□□□ 0.84
NELFCD-209ENST00000486263 FOXD1Q16676 465 aa20.3■□□□□ 0.84
NELFCD-209ENST00000486263 TET3O43151 1660 aa20.29■□□□□ 0.84
NELFCD-209ENST00000486263 HSPA2P54652 639 aa20.29■□□□□ 0.84
NELFCD-209ENST00000486263 EFCAB6Q5THR3 1501 aa20.26■□□□□ 0.83
NELFCD-209ENST00000486263 CAMSAP1Q5T5Y3 1602 aa20.25■□□□□ 0.83
NELFCD-209ENST00000486263 ARHGAP31Q2M1Z3 1444 aa20.23■□□□□ 0.83
NELFCD-209ENST00000486263 RPRD2Q5VT52 1461 aaKnown RBP20.23■□□□□ 0.83
NELFCD-209ENST00000486263 CLSPNQ9HAW4 1339 aa20.23■□□□□ 0.83
NELFCD-209ENST00000486263 E9PCH4 1651 aa20.22■□□□□ 0.83
NELFCD-209ENST00000486263 ZNF142P52746 1687 aaPredicted RBP20.2■□□□□ 0.82
NELFCD-209ENST00000486263 DMRT2Q9Y5R5 561 aa20.2■□□□□ 0.82
NELFCD-209ENST00000486263 MYO3AQ8NEV4 1616 aa20.19■□□□□ 0.82
NELFCD-209ENST00000486263 TNRQ92752 1358 aa20.19■□□□□ 0.82
NELFCD-209ENST00000486263 ANKRD30BQ9BXX2 1392 aa20.19■□□□□ 0.82
NELFCD-209ENST00000486263 CEP170BQ9Y4F5 1589 aaPredicted RBP20.17■□□□□ 0.82
NELFCD-209ENST00000486263 NEUROD1Q13562 356 aa20.17■□□□□ 0.82
NELFCD-209ENST00000486263 FBXO31Q5XUX0 539 aaPredicted RBP20.17■□□□□ 0.82
NELFCD-209ENST00000486263 STRCQ7RTU9 1775 aa20.16■□□□□ 0.82
NELFCD-209ENST00000486263 A2ML1A8K2U0 1454 aa20.16■□□□□ 0.82
NELFCD-209ENST00000486263 CCDC144AA2RUR9 1427 aa20.15■□□□□ 0.82
NELFCD-209ENST00000486263 CFAP65Q6ZU64 1925 aaKnown RBP20.14■□□□□ 0.81
NELFCD-209ENST00000486263 NLRP1Q9C000 1473 aa20.14■□□□□ 0.81
NELFCD-209ENST00000486263 PTPRTO14522 1441 aa20.14■□□□□ 0.81
NELFCD-209ENST00000486263 SIN3AQ96ST3 1273 aa20.14■□□□□ 0.81
NELFCD-209ENST00000486263 SPHKAPQ2M3C7 1700 aa20.13■□□□□ 0.81
NELFCD-209ENST00000486263 SPATA31D1Q6ZQQ2 1576 aa20.13■□□□□ 0.81
NELFCD-209ENST00000486263 ERVK-7P63135 1459 aa20.13■□□□□ 0.81
NELFCD-209ENST00000486263 PLA2R1Q13018 1463 aa20.13■□□□□ 0.81
NELFCD-209ENST00000486263 NOS1P29475 1434 aa20.11■□□□□ 0.81
NELFCD-209ENST00000486263 SLC52A1Q9NWF4 448 aa20.11■□□□□ 0.81
NELFCD-209ENST00000486263 TRPM2O94759 1503 aa20.11■□□□□ 0.81
NELFCD-209ENST00000486263 CHGAP10645 457 aaKnown RBP20.09■□□□□ 0.81
NELFCD-209ENST00000486263 THEMISQ8N1K5 641 aaPredicted RBP20.07■□□□□ 0.8
NELFCD-209ENST00000486263 STAG3Q9UJ98 1225 aa20.07■□□□□ 0.8
NELFCD-209ENST00000486263 SYNMO15061 1565 aa20.05■□□□□ 0.8
NELFCD-209ENST00000486263 IDI1Q13907 227 aa20.05■□□□□ 0.8
NELFCD-209ENST00000486263 TONSLQ96HA7 1378 aa20.04■□□□□ 0.8
NELFCD-209ENST00000486263 UGGT1Q9NYU2 1555 aa20.04■□□□□ 0.8
NELFCD-209ENST00000486263 CLTCL1P53675 1640 aa20.03■□□□□ 0.8
NELFCD-209ENST00000486263 ZEB1P37275 1124 aaPredicted RBP20.02■□□□□ 0.8
NELFCD-209ENST00000486263 RGL3Q3MIN7 710 aa20.02■□□□□ 0.8
NELFCD-209ENST00000486263 ZNF326Q5BKZ1 582 aaKnown RBP20.01■□□□□ 0.79
NELFCD-209ENST00000486263 NCKAP5LQ9HCH0 1330 aa20.01■□□□□ 0.79
NELFCD-209ENST00000486263 TIMELESSQ9UNS1 1208 aa20■□□□□ 0.79
NELFCD-209ENST00000486263 KIF1BO60333 1816 aa19.99■□□□□ 0.79
NELFCD-209ENST00000486263 PIK3C2BO00750 1634 aa19.98■□□□□ 0.79
NELFCD-209ENST00000486263 ANKLE2Q86XL3 938 aa19.98■□□□□ 0.79
NELFCD-209ENST00000486263 POLR1AO95602 1720 aaPredicted RBP19.97■□□□□ 0.79
NELFCD-209ENST00000486263 UBR1Q8IWV7 1749 aa19.96■□□□□ 0.79
NELFCD-209ENST00000486263 KDM5AP29375 1690 aaKnown RBP19.95■□□□□ 0.78
NELFCD-209ENST00000486263 L3MBTL2Q969R5 705 aa19.95■□□□□ 0.78
NELFCD-209ENST00000486263 MED14O60244 1454 aa19.94■□□□□ 0.78
NELFCD-209ENST00000486263 CERKQ8TCT0 537 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms