RNA–Protein interactions for RNA: ENST00000485628.2

APOE-205, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-205ENST00000485628 UNC13BO14795 1591 aa23.71■■□□□ 1.39
APOE-205ENST00000485628 VWDEQ8N2E2 1590 aa23.69■■□□□ 1.38
APOE-205ENST00000485628 ACIN1Q9UKV3 1341 aaKnown RBP23.69■■□□□ 1.38
APOE-205ENST00000485628 KIF3BO15066 747 aa23.68■■□□□ 1.38
APOE-205ENST00000485628 PRDM15P57071 1507 aaPredicted RBP23.68■■□□□ 1.38
APOE-205ENST00000485628 KDM5DQ9BY66 1539 aa23.68■■□□□ 1.38
APOE-205ENST00000485628 PPP6R1Q9UPN7 881 aa23.63■■□□□ 1.37
APOE-205ENST00000485628 FAM135AQ9P2D6 1515 aa23.61■■□□□ 1.37
APOE-205ENST00000485628 IQGAP3Q86VI3 1631 aa23.61■■□□□ 1.37
APOE-205ENST00000485628 PZPP20742 1482 aa23.6■■□□□ 1.37
APOE-205ENST00000485628 LMTK2Q8IWU2 1503 aa23.59■■□□□ 1.37
APOE-205ENST00000485628 NUP155O75694 1391 aa23.57■■□□□ 1.36
APOE-205ENST00000485628 GGT6Q6P531 493 aa23.56■■□□□ 1.36
APOE-205ENST00000485628 ABCC3O15438 1527 aa23.54■■□□□ 1.36
APOE-205ENST00000485628 ADAMTSL3P82987 1691 aa23.54■■□□□ 1.36
APOE-205ENST00000485628 ZC3H13Q5T200 1668 aaKnown RBP23.54■■□□□ 1.36
APOE-205ENST00000485628 ARID4BQ4LE39 1312 aaPredicted RBP23.51■■□□□ 1.35
APOE-205ENST00000485628 KANK1Q14678 1352 aa23.51■■□□□ 1.35
APOE-205ENST00000485628 TET3O43151 1660 aa23.51■■□□□ 1.35
APOE-205ENST00000485628 CEP152O94986 1710 aa23.5■■□□□ 1.35
APOE-205ENST00000485628 TRIM52Q96A61 297 aa23.5■■□□□ 1.35
APOE-205ENST00000485628 MPHOSPH9Q99550 1183 aa23.5■■□□□ 1.35
APOE-205ENST00000485628 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.5■■□□□ 1.354e-44■□□□□ 8.7
APOE-205ENST00000485628 DHX57Q6P158 1386 aaKnown RBP23.5■■□□□ 1.35
APOE-205ENST00000485628 ARHGAP31Q2M1Z3 1444 aa23.49■■□□□ 1.35
APOE-205ENST00000485628 WASHC2CQ9Y4E1 1318 aa23.47■■□□□ 1.35
APOE-205ENST00000485628 MROH2AA6NES4 1674 aa23.46■■□□□ 1.35
APOE-205ENST00000485628 MLECQ14165 292 aa23.46■■□□□ 1.35
APOE-205ENST00000485628 EFCAB6Q5THR3 1501 aa23.46■■□□□ 1.35
APOE-205ENST00000485628 CNTLNQ9NXG0 1405 aa23.46■■□□□ 1.35
APOE-205ENST00000485628 CLTCQ00610 1675 aaKnown RBP23.45■■□□□ 1.34
APOE-205ENST00000485628 CAMSAP1Q5T5Y3 1602 aa23.45■■□□□ 1.34
APOE-205ENST00000485628 E9PCH4 1651 aa23.44■■□□□ 1.34
APOE-205ENST00000485628 SLC4A1APQ9BWU0 796 aaKnown RBP23.44■■□□□ 1.34
APOE-205ENST00000485628 FER1L4A9Z1Z3 1794 aa23.43■■□□□ 1.34
APOE-205ENST00000485628 RPRD2Q5VT52 1461 aaKnown RBP23.43■■□□□ 1.34
APOE-205ENST00000485628 NPATQ14207 1427 aa23.42■■□□□ 1.34
APOE-205ENST00000485628 MADDQ8WXG6 1647 aa23.41■■□□□ 1.34
APOE-205ENST00000485628 PKD2Q13563 968 aa23.41■■□□□ 1.34
APOE-205ENST00000485628 ZMYM3Q14202 1370 aa23.4■■□□□ 1.34
APOE-205ENST00000485628 PTPRTO14522 1441 aa23.39■■□□□ 1.33
APOE-205ENST00000485628 PLA2R1Q13018 1463 aa23.38■■□□□ 1.33
APOE-205ENST00000485628 NOS1P29475 1434 aa23.36■■□□□ 1.33
APOE-205ENST00000485628 ANKRD30BQ9BXX2 1392 aa23.36■■□□□ 1.33
APOE-205ENST00000485628 C3P01024 1663 aa23.35■■□□□ 1.33
APOE-205ENST00000485628 KDM4FA0A1W2PPD8 638 aa23.34■■□□□ 1.33
APOE-205ENST00000485628 RIMS1Q86UR5 1692 aaKnown RBP23.33■■□□□ 1.33
APOE-205ENST00000485628 SPATA31D1Q6ZQQ2 1576 aa23.33■■□□□ 1.33
APOE-205ENST00000485628 FOXD1Q16676 465 aa23.33■■□□□ 1.33
APOE-205ENST00000485628 CLSPNQ9HAW4 1339 aa23.32■■□□□ 1.32
APOE-205ENST00000485628 PREX1Q8TCU6 1659 aa23.32■■□□□ 1.32
APOE-205ENST00000485628 SPHKAPQ2M3C7 1700 aa23.3■■□□□ 1.32
APOE-205ENST00000485628 ERVK-7P63135 1459 aa23.3■■□□□ 1.32
APOE-205ENST00000485628 ESF1Q9H501 851 aaKnown RBP23.3■■□□□ 1.32
APOE-205ENST00000485628 CFAP65Q6ZU64 1925 aaKnown RBP23.29■■□□□ 1.32
APOE-205ENST00000485628 TRPM2O94759 1503 aa23.28■■□□□ 1.32
APOE-205ENST00000485628 SYNMO15061 1565 aa23.28■■□□□ 1.32
APOE-205ENST00000485628 FBXO31Q5XUX0 539 aaPredicted RBP23.28■■□□□ 1.32
APOE-205ENST00000485628 PTPRMP28827 1452 aa23.28■■□□□ 1.32
APOE-205ENST00000485628 PIK3C2BO00750 1634 aa23.26■■□□□ 1.31
APOE-205ENST00000485628 CEBPAP49715 358 aaPredicted RBP23.25■■□□□ 1.31
APOE-205ENST00000485628 SETD1BQ9UPS6 1966 aaKnown RBP23.21■■□□□ 1.31
APOE-205ENST00000485628 CLTCL1P53675 1640 aa23.2■■□□□ 1.3
APOE-205ENST00000485628 CCER1Q8TC90 406 aaPredicted RBP23.2■■□□□ 1.3
APOE-205ENST00000485628 SLC52A1Q9NWF4 448 aa23.18■■□□□ 1.3
APOE-205ENST00000485628 NEURL4Q96JN8 1562 aa23.18■■□□□ 1.3
APOE-205ENST00000485628 UGGT1Q9NYU2 1555 aa23.18■■□□□ 1.3
APOE-205ENST00000485628 TNRQ92752 1358 aa23.17■■□□□ 1.3
APOE-205ENST00000485628 IDI1Q13907 227 aa23.16■■□□□ 1.3
APOE-205ENST00000485628 CCDC144AA2RUR9 1427 aa23.16■■□□□ 1.3
APOE-205ENST00000485628 SIN3AQ96ST3 1273 aa23.15■■□□□ 1.3
APOE-205ENST00000485628 NLRP1Q9C000 1473 aa23.14■■□□□ 1.29
APOE-205ENST00000485628 SPATA31E1Q6ZUB1 1445 aa23.14■■□□□ 1.29
APOE-205ENST00000485628 KDM5AP29375 1690 aaKnown RBP23.13■■□□□ 1.29
APOE-205ENST00000485628 TMEM131LA2VDJ0 1609 aa23.11■■□□□ 1.29
APOE-205ENST00000485628 ADGRB3O60242 1522 aa23.09■■□□□ 1.29
APOE-205ENST00000485628 MYO3AQ8NEV4 1616 aa23.09■■□□□ 1.29
APOE-205ENST00000485628 KIF1BO60333 1816 aa23.09■■□□□ 1.29
APOE-205ENST00000485628 ZNF142P52746 1687 aaPredicted RBP23.07■■□□□ 1.28
APOE-205ENST00000485628 A2ML1A8K2U0 1454 aa23.06■■□□□ 1.28
APOE-205ENST00000485628 UBR1Q8IWV7 1749 aa23.06■■□□□ 1.28
APOE-205ENST00000485628 MYO5BQ9ULV0 1848 aa23.04■■□□□ 1.28
APOE-205ENST00000485628 CEP170BQ9Y4F5 1589 aaPredicted RBP23.03■■□□□ 1.28
APOE-205ENST00000485628 TIMELESSQ9UNS1 1208 aa23.03■■□□□ 1.28
APOE-205ENST00000485628 NEUROD1Q13562 356 aa23.01■■□□□ 1.27
APOE-205ENST00000485628 PLPPR3Q6T4P5 718 aa23■■□□□ 1.27
APOE-205ENST00000485628 IFT172Q9UG01 1749 aa22.99■■□□□ 1.27
APOE-205ENST00000485628 UHRF1BP1Q6BDS2 1440 aa22.98■■□□□ 1.27
APOE-205ENST00000485628 ARHGAP23Q9P227 1491 aa22.98■■□□□ 1.27
APOE-205ENST00000485628 RPGRIP1LQ68CZ1 1315 aa22.97■■□□□ 1.27
APOE-205ENST00000485628 ZFYVE9O95405 1425 aa22.97■■□□□ 1.27
APOE-205ENST00000485628 SLIT1O75093 1534 aa22.97■■□□□ 1.27
APOE-205ENST00000485628 L3MBTL2Q969R5 705 aa22.96■■□□□ 1.27
APOE-205ENST00000485628 NEXMIFQ5QGS0 1516 aa22.96■■□□□ 1.27
APOE-205ENST00000485628 PPLO60437 1756 aa22.95■■□□□ 1.26
APOE-205ENST00000485628 TMEM2Q9UHN6 1383 aa22.94■■□□□ 1.26
APOE-205ENST00000485628 STAC3Q96MF2 364 aa22.94■■□□□ 1.26
APOE-205ENST00000485628 LMTK3Q96Q04 1460 aa22.93■■□□□ 1.26
APOE-205ENST00000485628 THEMISQ8N1K5 641 aaPredicted RBP22.93■■□□□ 1.26
APOE-205ENST00000485628 RGL3Q3MIN7 710 aa22.92■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms