RNA–Protein interactions for RNA: ENST00000483687.5

PCCB-216, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 3 BASIC

Gene PCCB, Length 1,727 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-216ENST00000483687 NUP155O75694 1391 aa28.03■■■□□ 2.08
PCCB-216ENST00000483687 DEPDC5O75140 1603 aa28.02■■■□□ 2.08
PCCB-216ENST00000483687 BCORL1Q5H9F3 1711 aa28.02■■■□□ 2.08
PCCB-216ENST00000483687 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.01■■■□□ 2.07
PCCB-216ENST00000483687 KDM5DQ9BY66 1539 aa28■■■□□ 2.07
PCCB-216ENST00000483687 RNF17Q9BXT8 1623 aaKnown RBP27.98■■■□□ 2.07
PCCB-216ENST00000483687 PZPP20742 1482 aa27.97■■■□□ 2.07
PCCB-216ENST00000483687 MPHOSPH9Q99550 1183 aa27.97■■■□□ 2.07
PCCB-216ENST00000483687 PRDM15P57071 1507 aaPredicted RBP27.96■■■□□ 2.07
PCCB-216ENST00000483687 SLC4A1APQ9BWU0 796 aaKnown RBP27.95■■■□□ 2.07
PCCB-216ENST00000483687 IQGAP3Q86VI3 1631 aa27.95■■■□□ 2.07
PCCB-216ENST00000483687 MROH1Q8NDA8 1641 aa27.95■■■□□ 2.07
PCCB-216ENST00000483687 SIGLEC1Q9BZZ2 1709 aa27.95■■■□□ 2.06
PCCB-216ENST00000483687 AGLP35573 1532 aa27.94■■■□□ 2.06
PCCB-216ENST00000483687 FAM135AQ9P2D6 1515 aa27.94■■■□□ 2.06
PCCB-216ENST00000483687 GGT6Q6P531 493 aa27.92■■■□□ 2.06
PCCB-216ENST00000483687 KANK1Q14678 1352 aa27.92■■■□□ 2.06
PCCB-216ENST00000483687 VWDEQ8N2E2 1590 aa27.89■■■□□ 2.06
PCCB-216ENST00000483687 ARID4BQ4LE39 1312 aaPredicted RBP27.85■■■□□ 2.05
PCCB-216ENST00000483687 CLSPNQ9HAW4 1339 aa27.85■■■□□ 2.05
PCCB-216ENST00000483687 PKD2Q13563 968 aa27.84■■■□□ 2.05
PCCB-216ENST00000483687 CEP152O94986 1710 aa27.84■■■□□ 2.05
PCCB-216ENST00000483687 TET3O43151 1660 aa27.82■■■□□ 2.04
PCCB-216ENST00000483687 FOXD1Q16676 465 aa27.82■■■□□ 2.04
PCCB-216ENST00000483687 WASHC2CQ9Y4E1 1318 aa27.8■■■□□ 2.04
PCCB-216ENST00000483687 MLECQ14165 292 aa27.8■■■□□ 2.04
PCCB-216ENST00000483687 ZC3H13Q5T200 1668 aaKnown RBP27.79■■■□□ 2.04
PCCB-216ENST00000483687 ABCC3O15438 1527 aa27.79■■■□□ 2.04
PCCB-216ENST00000483687 LMTK2Q8IWU2 1503 aa27.79■■■□□ 2.04
PCCB-216ENST00000483687 E9PCH4 1651 aa27.76■■■□□ 2.03
PCCB-216ENST00000483687 PPP6R1Q9UPN7 881 aa27.75■■■□□ 2.03
PCCB-216ENST00000483687 EFCAB6Q5THR3 1501 aa27.75■■■□□ 2.03
PCCB-216ENST00000483687 CAMSAP1Q5T5Y3 1602 aa27.73■■■□□ 2.03
PCCB-216ENST00000483687 ANKRD30BQ9BXX2 1392 aa27.72■■■□□ 2.03
PCCB-216ENST00000483687 CLTCQ00610 1675 aaKnown RBP27.7■■■□□ 2.02
PCCB-216ENST00000483687 SIN3AQ96ST3 1273 aa27.68■■■□□ 2.02
PCCB-216ENST00000483687 ESF1Q9H501 851 aaKnown RBP27.67■■■□□ 2.02
PCCB-216ENST00000483687 RPRD2Q5VT52 1461 aaKnown RBP27.66■■■□□ 2.02
PCCB-216ENST00000483687 NPATQ14207 1427 aa27.66■■■□□ 2.02
PCCB-216ENST00000483687 CFAP65Q6ZU64 1925 aaKnown RBP27.65■■■□□ 2.02
PCCB-216ENST00000483687 NEUROD1Q13562 356 aa27.64■■■□□ 2.02
PCCB-216ENST00000483687 SPHKAPQ2M3C7 1700 aa27.64■■■□□ 2.02
PCCB-216ENST00000483687 ARHGAP31Q2M1Z3 1444 aa27.63■■■□□ 2.01
PCCB-216ENST00000483687 ZEB1P37275 1124 aaPredicted RBP27.63■■■□□ 2.01
PCCB-216ENST00000483687 FER1L4A9Z1Z3 1794 aa27.61■■■□□ 2.01
PCCB-216ENST00000483687 PLA2R1Q13018 1463 aa27.61■■■□□ 2.01
PCCB-216ENST00000483687 CNTLNQ9NXG0 1405 aa27.6■■■□□ 2.01
PCCB-216ENST00000483687 PTPRTO14522 1441 aa27.59■■■□□ 2.01
PCCB-216ENST00000483687 TRPM2O94759 1503 aa27.58■■■□□ 2.01
PCCB-216ENST00000483687 CCDC144AA2RUR9 1427 aa27.58■■■□□ 2.01
PCCB-216ENST00000483687 MROH2AA6NES4 1674 aa27.56■■■□□ 2
PCCB-216ENST00000483687 ZMYM3Q14202 1370 aa27.55■■■□□ 2
PCCB-216ENST00000483687 PREX1Q8TCU6 1659 aa27.54■■■□□ 2
PCCB-216ENST00000483687 MADDQ8WXG6 1647 aa27.52■■■□□ 2
PCCB-216ENST00000483687 ADAMTSL3P82987 1691 aa27.51■■□□□ 1.99
PCCB-216ENST00000483687 NOS1P29475 1434 aa27.51■■□□□ 1.99
PCCB-216ENST00000483687 TONSLQ96HA7 1378 aa27.5■■□□□ 1.99
PCCB-216ENST00000483687 CLTCL1P53675 1640 aa27.49■■□□□ 1.99
PCCB-216ENST00000483687 ERVK-7P63135 1459 aa27.49■■□□□ 1.99
PCCB-216ENST00000483687 SYNMO15061 1565 aa27.48■■□□□ 1.99
PCCB-216ENST00000483687 FBXO31Q5XUX0 539 aaPredicted RBP27.47■■□□□ 1.99
PCCB-216ENST00000483687 RIMS1Q86UR5 1692 aaKnown RBP27.47■■□□□ 1.99
PCCB-216ENST00000483687 UGGT1Q9NYU2 1555 aa27.47■■□□□ 1.99
PCCB-216ENST00000483687 C3P01024 1663 aa27.46■■□□□ 1.99
PCCB-216ENST00000483687 TIMELESSQ9UNS1 1208 aa27.46■■□□□ 1.99
PCCB-216ENST00000483687 SPATA31D1Q6ZQQ2 1576 aa27.45■■□□□ 1.99
PCCB-216ENST00000483687 KIF1BO60333 1816 aa27.42■■□□□ 1.98
PCCB-216ENST00000483687 PIK3C2BO00750 1634 aa27.41■■□□□ 1.98
PCCB-216ENST00000483687 CEBPAP49715 358 aaPredicted RBP27.4■■□□□ 1.98
PCCB-216ENST00000483687 SLC52A1Q9NWF4 448 aa27.38■■□□□ 1.97
PCCB-216ENST00000483687 PLPPR3Q6T4P5 718 aa27.38■■□□□ 1.97
PCCB-216ENST00000483687 L3MBTL2Q969R5 705 aa27.37■■□□□ 1.97
PCCB-216ENST00000483687 RGL3Q3MIN7 710 aa27.36■■□□□ 1.97
PCCB-216ENST00000483687 SPATA31E1Q6ZUB1 1445 aa27.35■■□□□ 1.97
PCCB-216ENST00000483687 IDI1Q13907 227 aa27.35■■□□□ 1.97
PCCB-216ENST00000483687 TNRQ92752 1358 aa27.35■■□□□ 1.97
PCCB-216ENST00000483687 NEURL4Q96JN8 1562 aa27.33■■□□□ 1.97
PCCB-216ENST00000483687 CHGAP10645 457 aaKnown RBP27.33■■□□□ 1.96
PCCB-216ENST00000483687 ADGRB3O60242 1522 aa27.31■■□□□ 1.96
PCCB-216ENST00000483687 PPP1R15AO75807 674 aaPredicted RBP27.29■■□□□ 1.96
PCCB-216ENST00000483687 PTPRMP28827 1452 aa27.28■■□□□ 1.96
PCCB-216ENST00000483687 DCAF11Q8TEB1 546 aa27.27■■□□□ 1.96
PCCB-216ENST00000483687 MYO5BQ9ULV0 1848 aa27.26■■□□□ 1.96
PCCB-216ENST00000483687 TMEM131LA2VDJ0 1609 aa27.26■■□□□ 1.95
PCCB-216ENST00000483687 ZNF326Q5BKZ1 582 aaKnown RBP27.24■■□□□ 1.95
PCCB-216ENST00000483687 STAG3Q9UJ98 1225 aa27.24■■□□□ 1.95
PCCB-216ENST00000483687 NLRP1Q9C000 1473 aa27.24■■□□□ 1.95
PCCB-216ENST00000483687 KDM2AQ9Y2K7 1162 aa27.23■■□□□ 1.95
PCCB-216ENST00000483687 MYO3AQ8NEV4 1616 aa27.2■■□□□ 1.95
PCCB-216ENST00000483687 SETD1BQ9UPS6 1966 aaKnown RBP27.2■■□□□ 1.94
PCCB-216ENST00000483687 IFT172Q9UG01 1749 aa27.2■■□□□ 1.94
PCCB-216ENST00000483687 KDM4FA0A1W2PPD8 638 aa27.19■■□□□ 1.94
PCCB-216ENST00000483687 KDM5AP29375 1690 aaKnown RBP27.18■■□□□ 1.94
PCCB-216ENST00000483687 A2ML1A8K2U0 1454 aa27.18■■□□□ 1.94
PCCB-216ENST00000483687 PPLO60437 1756 aa27.17■■□□□ 1.94
PCCB-216ENST00000483687 UBR1Q8IWV7 1749 aa27.17■■□□□ 1.94
PCCB-216ENST00000483687 RPGRIP1LQ68CZ1 1315 aa27.16■■□□□ 1.94
PCCB-216ENST00000483687 STAC3Q96MF2 364 aa27.15■■□□□ 1.94
PCCB-216ENST00000483687 NEXMIFQ5QGS0 1516 aa27.14■■□□□ 1.94
PCCB-216ENST00000483687 UHRF1BP1Q6BDS2 1440 aa27.14■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms