RNA–Protein interactions for RNA: ENST00000482902.5

SSR4-209, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 2,409 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-209ENST00000482902 CCDC141Q6ZP82 1450 aa24.35■■□□□ 1.49
SSR4-209ENST00000482902 ST20-MTHFSA0A0A6YYL1 179 aa24.34■■□□□ 1.49
SSR4-209ENST00000482902 SMG6Q86US8 1419 aaKnown RBP24.34■■□□□ 1.49
SSR4-209ENST00000482902 SAMD9LQ8IVG5 1584 aa24.32■■□□□ 1.48
SSR4-209ENST00000482902 RSPH4AQ5TD94 716 aa24.3■■□□□ 1.48
SSR4-209ENST00000482902 IPO9Q96P70 1041 aaKnown RBP24.3■■□□□ 1.48
SSR4-209ENST00000482902 FAM135AQ9P2D6 1515 aa24.3■■□□□ 1.48
SSR4-209ENST00000482902 TMC1Q8TDI8 760 aa24.29■■□□□ 1.48
SSR4-209ENST00000482902 PNISRQ8TF01 805 aaKnown RBP24.29■■□□□ 1.48
SSR4-209ENST00000482902 NUDCQ9Y266 331 aa24.29■■□□□ 1.48
SSR4-209ENST00000482902 PREX2Q70Z35 1606 aa24.28■■□□□ 1.48
SSR4-209ENST00000482902 CDC42BPBQ9Y5S2 1711 aa24.28■■□□□ 1.48
SSR4-209ENST00000482902 ANP32AP39687 249 aaKnown RBP24.26■■□□□ 1.47
SSR4-209ENST00000482902 ANO8Q9HCE9 1232 aaPredicted RBP24.26■■□□□ 1.47
SSR4-209ENST00000482902 RNF123Q5XPI4 1314 aa24.24■■□□□ 1.47
SSR4-209ENST00000482902 CCDC144AA2RUR9 1427 aa24.23■■□□□ 1.47
SSR4-209ENST00000482902 RTL5Q5HYW3 569 aaPredicted RBP24.22■■□□□ 1.47
SSR4-209ENST00000482902 SYCP2Q9BX26 1530 aa24.22■■□□□ 1.47
SSR4-209ENST00000482902 SENP3-EIF4A1A0A087X0R7 540 aa24.21■■□□□ 1.47
SSR4-209ENST00000482902 MYBBP1AQ9BQG0 1328 aaKnown RBP24.2■■□□□ 1.47
SSR4-209ENST00000482902 PRAG1Q86YV5 1406 aa24.2■■□□□ 1.47
SSR4-209ENST00000482902 RALBP1Q15311 655 aa24.2■■□□□ 1.46
SSR4-209ENST00000482902 ARHGAP5Q13017 1502 aa24.2■■□□□ 1.46
SSR4-209ENST00000482902 KTN1Q86UP2 1357 aaKnown RBP24.2■■□□□ 1.46
SSR4-209ENST00000482902 ZBTB47Q9UFB7 747 aaPredicted RBP24.19■■□□□ 1.46
SSR4-209ENST00000482902 BRD4O60885 1362 aaPredicted RBP24.19■■□□□ 1.46
SSR4-209ENST00000482902 RGL3Q3MIN7 710 aa24.19■■□□□ 1.46
SSR4-209ENST00000482902 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.19■■□□□ 1.46
SSR4-209ENST00000482902 CCDC136Q96JN2 1154 aa24.18■■□□□ 1.46
SSR4-209ENST00000482902 TTC37Q6PGP7 1564 aa24.18■■□□□ 1.46
SSR4-209ENST00000482902 LRPPRCP42704 1394 aaKnown RBP24.17■■□□□ 1.46
SSR4-209ENST00000482902 MAST1Q9Y2H9 1570 aa24.16■■□□□ 1.46
SSR4-209ENST00000482902 PLA2R1Q13018 1463 aa24.16■■□□□ 1.46
SSR4-209ENST00000482902 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.16■■□□□ 1.464e-9■□□□□ 10.3
SSR4-209ENST00000482902 UNC13BO14795 1591 aa24.15■■□□□ 1.46
SSR4-209ENST00000482902 E9PCH4 1651 aa24.15■■□□□ 1.46
SSR4-209ENST00000482902 TRPM1Q7Z4N2 1603 aa24.15■■□□□ 1.46
SSR4-209ENST00000482902 NBPF1Q3BBV0 1214 aa24.14■■□□□ 1.46
SSR4-209ENST00000482902 SALL2Q9Y467 1007 aaPredicted RBP24.14■■□□□ 1.45
SSR4-209ENST00000482902 A2MP01023 1474 aa24.11■■□□□ 1.45
SSR4-209ENST00000482902 IL27Q8NEV9 243 aa24.11■■□□□ 1.45
SSR4-209ENST00000482902 PLEKHH2Q8IVE3 1493 aa24.11■■□□□ 1.45
SSR4-209ENST00000482902 CHD1O14646 1710 aa24.11■■□□□ 1.45
SSR4-209ENST00000482902 GPRASP1Q5JY77 1395 aa24.1■■□□□ 1.45
SSR4-209ENST00000482902 SHROOM2Q13796 1616 aa24.08■■□□□ 1.45
SSR4-209ENST00000482902 PLXNC1O60486 1568 aa24.08■■□□□ 1.44
SSR4-209ENST00000482902 NLRP13Q86W25 1043 aa24.07■■□□□ 1.44
SSR4-209ENST00000482902 PARD3Q8TEW0 1356 aa24.07■■□□□ 1.44
SSR4-209ENST00000482902 ABCC2Q92887 1545 aa24.07■■□□□ 1.44
SSR4-209ENST00000482902 IQGAP3Q86VI3 1631 aa24.06■■□□□ 1.44
SSR4-209ENST00000482902 MYO5CQ9NQX4 1742 aa24.05■■□□□ 1.44
SSR4-209ENST00000482902 PER1O15534 1290 aaPredicted RBP24.04■■□□□ 1.44
SSR4-209ENST00000482902 DUOX2Q9NRD8 1548 aa24.04■■□□□ 1.44
SSR4-209ENST00000482902 ERCC6L2Q5T890 1561 aa24.04■■□□□ 1.44
SSR4-209ENST00000482902 COL17A1Q9UMD9 1497 aaPredicted RBP24.03■■□□□ 1.44
SSR4-209ENST00000482902 PRDM15P57071 1507 aaPredicted RBP24.02■■□□□ 1.44
SSR4-209ENST00000482902 TESK2Q96S53 571 aa24.02■■□□□ 1.44
SSR4-209ENST00000482902 DISP3Q9P2K9 1392 aa24.02■■□□□ 1.44
SSR4-209ENST00000482902 LAMC1P11047 1609 aa24.01■■□□□ 1.43
SSR4-209ENST00000482902 ERBINQ96RT1 1412 aa24.01■■□□□ 1.43
SSR4-209ENST00000482902 ATP10AO60312 1499 aa24■■□□□ 1.43
SSR4-209ENST00000482902 MAGI2Q86UL8 1455 aa23.99■■□□□ 1.43
SSR4-209ENST00000482902 EIF2AK4Q9P2K8 1649 aaKnown RBP23.98■■□□□ 1.43
SSR4-209ENST00000482902 PLCH2O75038 1416 aa23.98■■□□□ 1.43
SSR4-209ENST00000482902 EFCAB2Q5VUJ9 269 aa23.97■■□□□ 1.43
SSR4-209ENST00000482902 WASHC2CQ9Y4E1 1318 aa23.97■■□□□ 1.43
SSR4-209ENST00000482902 CC2D1BQ5T0F9 858 aaKnown RBP23.96■■□□□ 1.43
SSR4-209ENST00000482902 TMF1P82094 1093 aa23.95■■□□□ 1.43
SSR4-209ENST00000482902 PANK3Q9H999 370 aa23.95■■□□□ 1.43
SSR4-209ENST00000482902 RRP1P56182 461 aaKnown RBP23.95■■□□□ 1.42
SSR4-209ENST00000482902 RTN4Q9NQC3 1192 aaKnown RBP23.95■■□□□ 1.42
SSR4-209ENST00000482902 USP35Q9P2H5 1018 aa23.94■■□□□ 1.42
SSR4-209ENST00000482902 RCAN3Q9UKA8 241 aa23.93■■□□□ 1.42
SSR4-209ENST00000482902 PDE3BQ13370 1112 aa23.93■■□□□ 1.42
SSR4-209ENST00000482902 NEFMP07197 916 aa23.92■■□□□ 1.42
SSR4-209ENST00000482902 NPM2Q86SE8 214 aaKnown RBP23.91■■□□□ 1.42
SSR4-209ENST00000482902 TRAPPC8Q9Y2L5 1435 aa23.91■■□□□ 1.42
SSR4-209ENST00000482902 LAS1LQ9Y4W2 734 aaKnown RBP23.91■■□□□ 1.42
SSR4-209ENST00000482902 TCERG1O14776 1098 aaKnown RBP23.9■■□□□ 1.42
SSR4-209ENST00000482902 ABCC1P33527 1531 aa23.9■■□□□ 1.42
SSR4-209ENST00000482902 ZCCHC11Q5TAX3 1644 aaKnown RBP23.89■■□□□ 1.41
SSR4-209ENST00000482902 PDE4AP27815 886 aa23.86■■□□□ 1.41
SSR4-209ENST00000482902 EXOC6Q8TAG9 804 aa23.86■■□□□ 1.41
SSR4-209ENST00000482902 CDCA7LQ96GN5 454 aa23.85■■□□□ 1.41
SSR4-209ENST00000482902 RNF17Q9BXT8 1623 aaKnown RBP23.85■■□□□ 1.41
SSR4-209ENST00000482902 SPAG9O60271 1321 aaKnown RBP23.85■■□□□ 1.41
SSR4-209ENST00000482902 UHRF1BP1LA0JNW5 1464 aa23.85■■□□□ 1.41
SSR4-209ENST00000482902 INSRP06213 1382 aa23.85■■□□□ 1.41
SSR4-209ENST00000482902 BACH2Q9BYV9 841 aa23.84■■□□□ 1.41
SSR4-209ENST00000482902 BLMP54132 1417 aaPredicted RBP23.84■■□□□ 1.41
SSR4-209ENST00000482902 AFAP1Q8N556 730 aa23.82■■□□□ 1.4
SSR4-209ENST00000482902 PPM1GO15355 546 aaPredicted RBP23.81■■□□□ 1.4
SSR4-209ENST00000482902 ZMYM4Q5VZL5 1548 aa23.81■■□□□ 1.4
SSR4-209ENST00000482902 MS4A1P11836 297 aa23.81■■□□□ 1.4
SSR4-209ENST00000482902 MADDQ8WXG6 1647 aa23.79■■□□□ 1.4
SSR4-209ENST00000482902 RTEL1-TNFRSF6BF6WH68 1400 aa23.79■■□□□ 1.4
SSR4-209ENST00000482902 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.79■■□□□ 1.4
SSR4-209ENST00000482902 WDR7Q9Y4E6 1490 aa23.78■■□□□ 1.4
SSR4-209ENST00000482902 TRPM2O94759 1503 aa23.78■■□□□ 1.4
SSR4-209ENST00000482902 CLASP1Q7Z460 1538 aa23.77■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms