RNA–Protein interactions for RNA: ENST00000482714.5

CCM2-215, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-215ENST00000482714 MLECQ14165 292 aa22.85■■□□□ 1.25
CCM2-215ENST00000482714 ESF1Q9H501 851 aaKnown RBP22.85■■□□□ 1.25
CCM2-215ENST00000482714 GCC2Q8IWJ2 1684 aa22.85■■□□□ 1.25
CCM2-215ENST00000482714 KANK1Q14678 1352 aa22.84■■□□□ 1.25
CCM2-215ENST00000482714 PCGF6Q9BYE7 350 aa22.83■■□□□ 1.25
CCM2-215ENST00000482714 WASHC2CQ9Y4E1 1318 aa22.82■■□□□ 1.24
CCM2-215ENST00000482714 FAM135AQ9P2D6 1515 aa22.82■■□□□ 1.24
CCM2-215ENST00000482714 SIGLEC1Q9BZZ2 1709 aa22.82■■□□□ 1.24
CCM2-215ENST00000482714 RNF17Q9BXT8 1623 aaKnown RBP22.81■■□□□ 1.24
CCM2-215ENST00000482714 CNTLNQ9NXG0 1405 aa22.81■■□□□ 1.24
CCM2-215ENST00000482714 RAB3GAP2Q9H2M9 1393 aa22.8■■□□□ 1.24
CCM2-215ENST00000482714 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.8■■□□□ 1.24
CCM2-215ENST00000482714 NUP155O75694 1391 aa22.79■■□□□ 1.24
CCM2-215ENST00000482714 TRIM52Q96A61 297 aa22.78■■□□□ 1.24
CCM2-215ENST00000482714 DEPDC5O75140 1603 aa22.77■■□□□ 1.24
CCM2-215ENST00000482714 KDM5DQ9BY66 1539 aa22.77■■□□□ 1.24
CCM2-215ENST00000482714 PRDM15P57071 1507 aaPredicted RBP22.75■■□□□ 1.23
CCM2-215ENST00000482714 ADAMTSL3P82987 1691 aa22.74■■□□□ 1.23
CCM2-215ENST00000482714 UNC13BO14795 1591 aa22.74■■□□□ 1.23
CCM2-215ENST00000482714 VWDEQ8N2E2 1590 aa22.73■■□□□ 1.23
CCM2-215ENST00000482714 MROH1Q8NDA8 1641 aa22.73■■□□□ 1.23
CCM2-215ENST00000482714 LMTK2Q8IWU2 1503 aa22.72■■□□□ 1.23
CCM2-215ENST00000482714 ZMYM3Q14202 1370 aa22.72■■□□□ 1.23
CCM2-215ENST00000482714 ARHGAP31Q2M1Z3 1444 aa22.69■■□□□ 1.22
CCM2-215ENST00000482714 MPHOSPH9Q99550 1183 aa22.69■■□□□ 1.22
CCM2-215ENST00000482714 SLC4A1APQ9BWU0 796 aaKnown RBP22.68■■□□□ 1.22
CCM2-215ENST00000482714 ABCC3O15438 1527 aa22.68■■□□□ 1.22
CCM2-215ENST00000482714 ZC3H13Q5T200 1668 aaKnown RBP22.67■■□□□ 1.22
CCM2-215ENST00000482714 IQGAP3Q86VI3 1631 aa22.66■■□□□ 1.22
CCM2-215ENST00000482714 MROH2AA6NES4 1674 aa22.63■■□□□ 1.21
CCM2-215ENST00000482714 MADDQ8WXG6 1647 aa22.63■■□□□ 1.21
CCM2-215ENST00000482714 FER1L4A9Z1Z3 1794 aa22.63■■□□□ 1.21
CCM2-215ENST00000482714 RPRD2Q5VT52 1461 aaKnown RBP22.63■■□□□ 1.21
CCM2-215ENST00000482714 PKD2Q13563 968 aa22.61■■□□□ 1.21
CCM2-215ENST00000482714 PZPP20742 1482 aa22.61■■□□□ 1.21
CCM2-215ENST00000482714 PTPRMP28827 1452 aa22.61■■□□□ 1.21
CCM2-215ENST00000482714 CLTCQ00610 1675 aaKnown RBP22.61■■□□□ 1.21
CCM2-215ENST00000482714 TET3O43151 1660 aa22.6■■□□□ 1.21
CCM2-215ENST00000482714 CEBPAP49715 358 aaPredicted RBP22.59■■□□□ 1.21
CCM2-215ENST00000482714 NPATQ14207 1427 aa22.58■■□□□ 1.21
CCM2-215ENST00000482714 EFCAB6Q5THR3 1501 aa22.57■■□□□ 1.2
CCM2-215ENST00000482714 RIMS1Q86UR5 1692 aaKnown RBP22.56■■□□□ 1.2
CCM2-215ENST00000482714 CEP152O94986 1710 aa22.56■■□□□ 1.2
CCM2-215ENST00000482714 CAMSAP1Q5T5Y3 1602 aa22.56■■□□□ 1.2
CCM2-215ENST00000482714 FBXO31Q5XUX0 539 aaPredicted RBP22.55■■□□□ 1.2
CCM2-215ENST00000482714 SETD1BQ9UPS6 1966 aaKnown RBP22.55■■□□□ 1.2
CCM2-215ENST00000482714 SLC52A1Q9NWF4 448 aa22.54■■□□□ 1.2
CCM2-215ENST00000482714 NOS1P29475 1434 aa22.52■■□□□ 1.2
CCM2-215ENST00000482714 C3P01024 1663 aa22.52■■□□□ 1.2
CCM2-215ENST00000482714 PTPRTO14522 1441 aa22.51■■□□□ 1.19
CCM2-215ENST00000482714 ERVK-7P63135 1459 aa22.49■■□□□ 1.19
CCM2-215ENST00000482714 E9PCH4 1651 aa22.48■■□□□ 1.19
CCM2-215ENST00000482714 SPATA31D1Q6ZQQ2 1576 aa22.48■■□□□ 1.19
CCM2-215ENST00000482714 TNRQ92752 1358 aa22.48■■□□□ 1.19
CCM2-215ENST00000482714 PLPPR3Q6T4P5 718 aa22.47■■□□□ 1.19
CCM2-215ENST00000482714 DHX57Q6P158 1386 aaKnown RBP22.47■■□□□ 1.19
CCM2-215ENST00000482714 FOXD1Q16676 465 aa22.45■■□□□ 1.18
CCM2-215ENST00000482714 ANKRD30BQ9BXX2 1392 aa22.44■■□□□ 1.18
CCM2-215ENST00000482714 IDI1Q13907 227 aa22.44■■□□□ 1.18
CCM2-215ENST00000482714 CFAP65Q6ZU64 1925 aaKnown RBP22.44■■□□□ 1.18
CCM2-215ENST00000482714 PREX1Q8TCU6 1659 aa22.43■■□□□ 1.18
CCM2-215ENST00000482714 NLRP1Q9C000 1473 aa22.42■■□□□ 1.18
CCM2-215ENST00000482714 CLSPNQ9HAW4 1339 aa22.42■■□□□ 1.18
CCM2-215ENST00000482714 PLA2R1Q13018 1463 aa22.42■■□□□ 1.18
CCM2-215ENST00000482714 TRPM2O94759 1503 aa22.38■■□□□ 1.17
CCM2-215ENST00000482714 THEMISQ8N1K5 641 aaPredicted RBP22.38■■□□□ 1.17
CCM2-215ENST00000482714 CCDC144AA2RUR9 1427 aa22.37■■□□□ 1.17
CCM2-215ENST00000482714 SPHKAPQ2M3C7 1700 aa22.37■■□□□ 1.17
CCM2-215ENST00000482714 UHRF1BP1Q6BDS2 1440 aa22.37■■□□□ 1.17
CCM2-215ENST00000482714 STAG3Q9UJ98 1225 aa22.35■■□□□ 1.17
CCM2-215ENST00000482714 SYNMO15061 1565 aa22.35■■□□□ 1.17
CCM2-215ENST00000482714 A2ML1A8K2U0 1454 aa22.34■■□□□ 1.17
CCM2-215ENST00000482714 HDGFP51858 240 aaKnown RBP22.33■■□□□ 1.16
CCM2-215ENST00000482714 CCER1Q8TC90 406 aaPredicted RBP22.32■■□□□ 1.16
CCM2-215ENST00000482714 PIK3C2BO00750 1634 aa22.31■■□□□ 1.16
CCM2-215ENST00000482714 LMTK3Q96Q04 1460 aa22.3■■□□□ 1.16
CCM2-215ENST00000482714 KDM5AP29375 1690 aaKnown RBP22.29■■□□□ 1.16
CCM2-215ENST00000482714 RPGRIP1LQ68CZ1 1315 aa22.28■■□□□ 1.16
CCM2-215ENST00000482714 CHGAP10645 457 aaKnown RBP22.28■■□□□ 1.16
CCM2-215ENST00000482714 STAC3Q96MF2 364 aa22.28■■□□□ 1.16
CCM2-215ENST00000482714 UGGT1Q9NYU2 1555 aa22.27■■□□□ 1.16
CCM2-215ENST00000482714 MYO3AQ8NEV4 1616 aa22.27■■□□□ 1.16
CCM2-215ENST00000482714 NEURL4Q96JN8 1562 aa22.27■■□□□ 1.16
CCM2-215ENST00000482714 CEP170BQ9Y4F5 1589 aaPredicted RBP22.27■■□□□ 1.16
CCM2-215ENST00000482714 CLTCL1P53675 1640 aa22.25■■□□□ 1.15
CCM2-215ENST00000482714 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.24■■□□□ 1.15
CCM2-215ENST00000482714 TIMELESSQ9UNS1 1208 aa22.24■■□□□ 1.15
CCM2-215ENST00000482714 ZNF142P52746 1687 aaPredicted RBP22.23■■□□□ 1.15
CCM2-215ENST00000482714 SIN3AQ96ST3 1273 aa22.23■■□□□ 1.15
CCM2-215ENST00000482714 SPATA31E1Q6ZUB1 1445 aa22.23■■□□□ 1.15
CCM2-215ENST00000482714 HSPA2P54652 639 aa22.22■■□□□ 1.15
CCM2-215ENST00000482714 EID1Q9Y6B2 187 aa22.22■■□□□ 1.15
CCM2-215ENST00000482714 TMEM131LA2VDJ0 1609 aa22.22■■□□□ 1.15
CCM2-215ENST00000482714 TMEM2Q9UHN6 1383 aa22.22■■□□□ 1.15
CCM2-215ENST00000482714 KIF1BO60333 1816 aa22.22■■□□□ 1.15
CCM2-215ENST00000482714 ADGRB3O60242 1522 aa22.22■■□□□ 1.15
CCM2-215ENST00000482714 ZNF326Q5BKZ1 582 aaKnown RBP22.22■■□□□ 1.15
CCM2-215ENST00000482714 ANKLE2Q86XL3 938 aa22.22■■□□□ 1.15
CCM2-215ENST00000482714 VGFO15240 615 aaPredicted RBP22.2■■□□□ 1.14
CCM2-215ENST00000482714 NEUROD1Q13562 356 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms