RNA–Protein interactions for RNA: ENST00000482042.1

CTNNB1-213, Transcript of catenin beta 1, humanhuman

TSL 2

Gene CTNNB1, Length 1,366 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNB1-213ENST00000482042 CCDC88BA6NC98 1476 aa11.81□□□□□ -0.52
CTNNB1-213ENST00000482042 DPYSL4O14531 572 aa11.81□□□□□ -0.52
CTNNB1-213ENST00000482042 TSHZ2Q9NRE2 1034 aa11.81□□□□□ -0.52
CTNNB1-213ENST00000482042 E2F4Q16254 413 aa11.79□□□□□ -0.52
CTNNB1-213ENST00000482042 WDR70Q9NW82 654 aa11.79□□□□□ -0.52
CTNNB1-213ENST00000482042 KIF21AQ7Z4S6 1674 aa11.79□□□□□ -0.52
CTNNB1-213ENST00000482042 PTGER2P43116 358 aa11.78□□□□□ -0.52
CTNNB1-213ENST00000482042 ANKRD13DQ6ZTN6 518 aa11.78□□□□□ -0.52
CTNNB1-213ENST00000482042 BCL2L12Q9HB09 334 aa11.78□□□□□ -0.52
CTNNB1-213ENST00000482042 ARIH1Q9Y4X5 557 aaPredicted RBP11.78□□□□□ -0.52
CTNNB1-213ENST00000482042 CADPSQ9ULU8 1353 aa11.77□□□□□ -0.53
CTNNB1-213ENST00000482042 PLCB2Q00722 1185 aa11.77□□□□□ -0.53
CTNNB1-213ENST00000482042 CFTRP13569 1480 aa11.75□□□□□ -0.53
CTNNB1-213ENST00000482042 PSEN2P49810 448 aa11.75□□□□□ -0.53
CTNNB1-213ENST00000482042 PDIA6Q15084 440 aa11.75□□□□□ -0.53
CTNNB1-213ENST00000482042 ZDHHC16Q969W1 377 aa11.75□□□□□ -0.53
CTNNB1-213ENST00000482042 PDS5BQ9NTI5 1447 aa11.74□□□□□ -0.53
CTNNB1-213ENST00000482042 NESP48681 1621 aa11.74□□□□□ -0.53
CTNNB1-213ENST00000482042 TK2O00142 265 aa11.73□□□□□ -0.53
CTNNB1-213ENST00000482042 PHF14O94880 888 aa11.73□□□□□ -0.53
CTNNB1-213ENST00000482042 DMRTA1Q5VZB9 504 aa11.73□□□□□ -0.53
CTNNB1-213ENST00000482042 KCNH8Q96L42 1107 aa11.73□□□□□ -0.53
CTNNB1-213ENST00000482042 KCNK17Q96T54 332 aa11.73□□□□□ -0.53
CTNNB1-213ENST00000482042 PCDHGA10Q9Y5H3 936 aa11.73□□□□□ -0.53
CTNNB1-213ENST00000482042 SPDYE16A6NNV3 312 aaPredicted RBP11.71□□□□□ -0.53
CTNNB1-213ENST00000482042 ADGRD1Q6QNK2 874 aa11.71□□□□□ -0.53
CTNNB1-213ENST00000482042 ADAM33Q9BZ11 813 aa11.71□□□□□ -0.53
CTNNB1-213ENST00000482042 MYT1LQ9UL68 1186 aa11.71□□□□□ -0.53
CTNNB1-213ENST00000482042 ERCC6Q03468 1493 aa11.71□□□□□ -0.53
CTNNB1-213ENST00000482042 PTPREP23469 700 aa11.7□□□□□ -0.54
CTNNB1-213ENST00000482042 TYW1BQ6NUM6 668 aa11.69□□□□□ -0.54
CTNNB1-213ENST00000482042 FBXW7Q969H0 707 aa11.69□□□□□ -0.54
CTNNB1-213ENST00000482042 RNF166Q96A37 237 aaPredicted RBP11.68□□□□□ -0.54
CTNNB1-213ENST00000482042 EPAS1Q99814 870 aa11.68□□□□□ -0.54
CTNNB1-213ENST00000482042 SLC4A5Q9BY07 1137 aa11.67□□□□□ -0.54
CTNNB1-213ENST00000482042 CEP164Q9UPV0 1460 aa11.66□□□□□ -0.54
CTNNB1-213ENST00000482042 THOC2Q8NI27 1593 aaKnown RBP11.66□□□□□ -0.54
CTNNB1-213ENST00000482042 HRO43593 1189 aa11.66□□□□□ -0.54
CTNNB1-213ENST00000482042 FANCD2Q9BXW9 1451 aa11.65□□□□□ -0.54
CTNNB1-213ENST00000482042 DDX12PQ92771 950 aa11.64□□□□□ -0.55
CTNNB1-213ENST00000482042 VPS9D1Q9Y2B5 631 aa11.64□□□□□ -0.55
CTNNB1-213ENST00000482042 ZBED2Q9BTP6 218 aa11.63□□□□□ -0.55
CTNNB1-213ENST00000482042 PPP1R3GB7ZBB8 358 aa11.62□□□□□ -0.55
CTNNB1-213ENST00000482042 KCNV2Q8TDN2 545 aa11.61□□□□□ -0.55
CTNNB1-213ENST00000482042 ABCC8Q09428 1581 aa11.61□□□□□ -0.55
CTNNB1-213ENST00000482042 ARHGEF1Q92888 912 aaKnown RBP11.6□□□□□ -0.55
CTNNB1-213ENST00000482042 MRC2Q9UBG0 1479 aa11.6□□□□□ -0.55
CTNNB1-213ENST00000482042 NBR1Q14596 966 aa11.59□□□□□ -0.55
CTNNB1-213ENST00000482042 WDR62O43379 1518 aa11.58□□□□□ -0.56
CTNNB1-213ENST00000482042 EN1Q05925 392 aaPredicted RBP11.58□□□□□ -0.56
CTNNB1-213ENST00000482042 CUX2O14529 1486 aa11.57□□□□□ -0.56
CTNNB1-213ENST00000482042 COL9A1P20849 921 aa11.57□□□□□ -0.56
CTNNB1-213ENST00000482042 C6orf132Q5T0Z8 1188 aa11.57□□□□□ -0.56
CTNNB1-213ENST00000482042 P3H3Q8IVL6 736 aa11.56□□□□□ -0.56
CTNNB1-213ENST00000482042 DNMBPQ6XZF7 1577 aa11.56□□□□□ -0.56
CTNNB1-213ENST00000482042 RBM33Q96EV2 1170 aaKnown RBP11.55□□□□□ -0.56
CTNNB1-213ENST00000482042 BHMG1C9JSJ3 638 aaPredicted RBP11.54□□□□□ -0.56
CTNNB1-213ENST00000482042 GRXCR2A6NFK2 248 aa11.53□□□□□ -0.56
CTNNB1-213ENST00000482042 HAP1P54257 671 aaPredicted RBP11.53□□□□□ -0.56
CTNNB1-213ENST00000482042 BIVM-ERCC5R4GMW8 1640 aa11.52□□□□□ -0.56
CTNNB1-213ENST00000482042 MAP3K7O43318 606 aa11.52□□□□□ -0.57
CTNNB1-213ENST00000482042 PRIM1P49642 420 aaKnown RBP11.52□□□□□ -0.57
CTNNB1-213ENST00000482042 STAC3Q96MF2 364 aa11.52□□□□□ -0.57
CTNNB1-213ENST00000482042 OSBPP22059 807 aa11.51□□□□□ -0.57
CTNNB1-213ENST00000482042 PROX2Q3B8N5 592 aa11.51□□□□□ -0.57
CTNNB1-213ENST00000482042 URB2Q14146 1524 aaKnown RBP11.5□□□□□ -0.57
CTNNB1-213ENST00000482042 TSR1Q2NL82 804 aaKnown RBP11.5□□□□□ -0.57
CTNNB1-213ENST00000482042 NBPF3Q9H094 633 aa11.5□□□□□ -0.57
CTNNB1-213ENST00000482042 RABGEF1Q9UJ41 708 aa11.5□□□□□ -0.57
CTNNB1-213ENST00000482042 TOPBP1Q92547 1522 aa11.5□□□□□ -0.57
CTNNB1-213ENST00000482042 ONECUT3O60422 494 aaPredicted RBP11.49□□□□□ -0.57
CTNNB1-213ENST00000482042 TOP2BQ02880 1626 aa11.47□□□□□ -0.57
CTNNB1-213ENST00000482042 MRPL50Q8N5N7 158 aaKnown RBP11.46□□□□□ -0.57
CTNNB1-213ENST00000482042 TRIM6-TRIM34B2RNG4 842 aa11.45□□□□□ -0.58
CTNNB1-213ENST00000482042 KCTD12Q96CX2 325 aaKnown RBP11.45□□□□□ -0.58
CTNNB1-213ENST00000482042 WDR97A6NE52 1622 aa11.44□□□□□ -0.58
CTNNB1-213ENST00000482042 CUX1P39880 1505 aa11.44□□□□□ -0.58
CTNNB1-213ENST00000482042 CERKQ8TCT0 537 aa11.44□□□□□ -0.58
CTNNB1-213ENST00000482042 HCSTQ9UBK5 93 aa11.44□□□□□ -0.58
CTNNB1-213ENST00000482042 MLLT3P42568 568 aaPredicted RBP11.43□□□□□ -0.58
CTNNB1-213ENST00000482042 KDM2AQ9Y2K7 1162 aa11.43□□□□□ -0.58
CTNNB1-213ENST00000482042 WRNQ14191 1432 aaPredicted RBP eCLIP11.43□□□□□ -0.58
CTNNB1-213ENST00000482042 LAPTM4BQ86VI4 370 aa11.42□□□□□ -0.58
CTNNB1-213ENST00000482042 KIAA1468Q9P260 1216 aa11.42□□□□□ -0.58
CTNNB1-213ENST00000482042 SYNJ1O43426 1573 aa11.42□□□□□ -0.58
CTNNB1-213ENST00000482042 CDHR5Q9HBB8 845 aa11.41□□□□□ -0.58
CTNNB1-213ENST00000482042 TARBP1Q13395 1621 aaKnown RBP11.41□□□□□ -0.58
CTNNB1-213ENST00000482042 IFT140Q96RY7 1462 aa11.41□□□□□ -0.58
CTNNB1-213ENST00000482042 GOLGA8CPA6NN73 597 aa11.4□□□□□ -0.59
CTNNB1-213ENST00000482042 TSKSQ9UJT2 592 aa11.4□□□□□ -0.59
CTNNB1-213ENST00000482042 POLA1P09884 1462 aaPredicted RBP11.39□□□□□ -0.59
CTNNB1-213ENST00000482042 FGD5Q6ZNL6 1462 aa11.39□□□□□ -0.59
CTNNB1-213ENST00000482042 PRSS12P56730 875 aa11.39□□□□□ -0.59
CTNNB1-213ENST00000482042 THSD4Q6ZMP0 1018 aa11.39□□□□□ -0.59
CTNNB1-213ENST00000482042 VSIG10Q8N0Z9 540 aa11.39□□□□□ -0.59
CTNNB1-213ENST00000482042 CDCA7LQ96GN5 454 aa11.39□□□□□ -0.59
CTNNB1-213ENST00000482042 RBM27Q9P2N5 1060 aaKnown RBP11.39□□□□□ -0.59
CTNNB1-213ENST00000482042 WNT2BQ93097 391 aa11.38□□□□□ -0.59
CTNNB1-213ENST00000482042 SEMA3EO15041 775 aa11.37□□□□□ -0.59
CTNNB1-213ENST00000482042 PBRM1Q86U86 1689 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms