RNA–Protein interactions for RNA: ENST00000480961.1

CTSA-206, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 513 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-206ENST00000480961 ROCK1Q13464 1354 aa30.86■■■□□ 2.53
CTSA-206ENST00000480961 ERBINQ96RT1 1412 aa30.85■■■□□ 2.53
CTSA-206ENST00000480961 WASHC2CQ9Y4E1 1318 aa30.84■■■□□ 2.53
CTSA-206ENST00000480961 PPP6R1Q9UPN7 881 aa30.84■■■□□ 2.53
CTSA-206ENST00000480961 ANKRD50Q9ULJ7 1429 aa30.81■■■□□ 2.52
CTSA-206ENST00000480961 CNTLNQ9NXG0 1405 aa30.81■■■□□ 2.52
CTSA-206ENST00000480961 ZMYM3Q14202 1370 aa30.8■■■□□ 2.52
CTSA-206ENST00000480961 EIF2AK4Q9P2K8 1649 aaKnown RBP30.76■■■□□ 2.52
CTSA-206ENST00000480961 CLTCQ00610 1675 aaKnown RBP30.74■■■□□ 2.51
CTSA-206ENST00000480961 RNF17Q9BXT8 1623 aaKnown RBP30.73■■■□□ 2.51
CTSA-206ENST00000480961 MROH1Q8NDA8 1641 aa30.71■■■□□ 2.51
CTSA-206ENST00000480961 KDM5DQ9BY66 1539 aa30.71■■■□□ 2.51
CTSA-206ENST00000480961 FBXO31Q5XUX0 539 aaPredicted RBP30.69■■■□□ 2.5
CTSA-206ENST00000480961 ABCC3O15438 1527 aa30.68■■■□□ 2.5
CTSA-206ENST00000480961 KANK1Q14678 1352 aa30.67■■■□□ 2.5
CTSA-206ENST00000480961 NAIPQ13075 1403 aa30.67■■■□□ 2.5
CTSA-206ENST00000480961 C3P01024 1663 aa30.67■■■□□ 2.5
CTSA-206ENST00000480961 PRDM15P57071 1507 aaPredicted RBP30.63■■■□□ 2.49
CTSA-206ENST00000480961 MROH2AA6NES4 1674 aa30.62■■■□□ 2.49
CTSA-206ENST00000480961 HFM1A2PYH4 1435 aa30.61■■■□□ 2.49
CTSA-206ENST00000480961 DEPDC5O75140 1603 aa30.61■■■□□ 2.49
CTSA-206ENST00000480961 FAM135AQ9P2D6 1515 aa30.6■■■□□ 2.49
CTSA-206ENST00000480961 NUP155O75694 1391 aa30.57■■■□□ 2.48
CTSA-206ENST00000480961 HSPA2P54652 639 aa30.56■■■□□ 2.48
CTSA-206ENST00000480961 PZPP20742 1482 aa30.56■■■□□ 2.48
CTSA-206ENST00000480961 NPATQ14207 1427 aa30.56■■■□□ 2.48
CTSA-206ENST00000480961 CEP152O94986 1710 aa30.55■■■□□ 2.48
CTSA-206ENST00000480961 VWDEQ8N2E2 1590 aa30.54■■■□□ 2.48
CTSA-206ENST00000480961 LMTK3Q96Q04 1460 aa30.53■■■□□ 2.48
CTSA-206ENST00000480961 ZC3H13Q5T200 1668 aaKnown RBP30.52■■■□□ 2.48
CTSA-206ENST00000480961 TRIM52Q96A61 297 aa30.51■■■□□ 2.47
CTSA-206ENST00000480961 TNRQ92752 1358 aa30.51■■■□□ 2.47
CTSA-206ENST00000480961 UHRF1BP1Q6BDS2 1440 aa30.5■■■□□ 2.47
CTSA-206ENST00000480961 UNC13BO14795 1591 aa30.49■■■□□ 2.47
CTSA-206ENST00000480961 LMTK2Q8IWU2 1503 aa30.49■■■□□ 2.47
CTSA-206ENST00000480961 CAMSAP1Q5T5Y3 1602 aa30.49■■■□□ 2.47
CTSA-206ENST00000480961 GCC2Q8IWJ2 1684 aa30.47■■■□□ 2.47
CTSA-206ENST00000480961 ARHGAP31Q2M1Z3 1444 aa30.47■■■□□ 2.47
CTSA-206ENST00000480961 ERVK-7P63135 1459 aa30.44■■■□□ 2.46
CTSA-206ENST00000480961 SETD5Q9C0A6 1442 aa30.43■■■□□ 2.46
CTSA-206ENST00000480961 PREX1Q8TCU6 1659 aa30.42■■■□□ 2.46
CTSA-206ENST00000480961 EFCAB6Q5THR3 1501 aa30.41■■■□□ 2.46
CTSA-206ENST00000480961 SETD1BQ9UPS6 1966 aaKnown RBP30.39■■■□□ 2.46
CTSA-206ENST00000480961 SPATA31D1Q6ZQQ2 1576 aa30.37■■■□□ 2.45
CTSA-206ENST00000480961 IQGAP3Q86VI3 1631 aa30.37■■■□□ 2.45
CTSA-206ENST00000480961 RAB3GAP2Q9H2M9 1393 aa30.36■■■□□ 2.45
CTSA-206ENST00000480961 MYO3AQ8NEV4 1616 aa30.35■■■□□ 2.45
CTSA-206ENST00000480961 CFAP65Q6ZU64 1925 aaKnown RBP30.34■■■□□ 2.45
CTSA-206ENST00000480961 TET3O43151 1660 aa30.34■■■□□ 2.45
CTSA-206ENST00000480961 SLC4A1APQ9BWU0 796 aaKnown RBP30.34■■■□□ 2.45
CTSA-206ENST00000480961 A2ML1A8K2U0 1454 aa30.32■■■□□ 2.44
CTSA-206ENST00000480961 PKD2Q13563 968 aa30.31■■■□□ 2.44
CTSA-206ENST00000480961 CEP170BQ9Y4F5 1589 aaPredicted RBP30.31■■■□□ 2.44
CTSA-206ENST00000480961 NOS1P29475 1434 aa30.3■■■□□ 2.44
CTSA-206ENST00000480961 IDI1Q13907 227 aa30.3■■■□□ 2.44
CTSA-206ENST00000480961 RPRD2Q5VT52 1461 aaKnown RBP30.3■■■□□ 2.44
CTSA-206ENST00000480961 NLRP1Q9C000 1473 aa30.3■■■□□ 2.44
CTSA-206ENST00000480961 TRIM26Q12899 539 aaPredicted RBP30.27■■■□□ 2.44
CTSA-206ENST00000480961 FOXD1Q16676 465 aa30.26■■■□□ 2.43
CTSA-206ENST00000480961 MPHOSPH9Q99550 1183 aa30.26■■■□□ 2.43
CTSA-206ENST00000480961 E9PCH4 1651 aa30.26■■■□□ 2.43
CTSA-206ENST00000480961 NCKAP5LQ9HCH0 1330 aa30.24■■■□□ 2.43
CTSA-206ENST00000480961 SYNMO15061 1565 aa30.24■■■□□ 2.43
CTSA-206ENST00000480961 THEMISQ8N1K5 641 aaPredicted RBP30.24■■■□□ 2.43
CTSA-206ENST00000480961 SLC52A1Q9NWF4 448 aa30.23■■■□□ 2.43
CTSA-206ENST00000480961 STAG3Q9UJ98 1225 aa30.23■■■□□ 2.43
CTSA-206ENST00000480961 UGGT1Q9NYU2 1555 aa30.21■■■□□ 2.43
CTSA-206ENST00000480961 ZNF142P52746 1687 aaPredicted RBP30.2■■■□□ 2.43
CTSA-206ENST00000480961 CHGAP10645 457 aaKnown RBP30.18■■■□□ 2.42
CTSA-206ENST00000480961 PTPRTO14522 1441 aa30.15■■■□□ 2.42
CTSA-206ENST00000480961 HRCP23327 699 aa30.15■■■□□ 2.42
CTSA-206ENST00000480961 ACIN1Q9UKV3 1341 aaKnown RBP30.15■■■□□ 2.42
CTSA-206ENST00000480961 PIK3C2BO00750 1634 aa30.13■■■□□ 2.41
CTSA-206ENST00000480961 PLA2R1Q13018 1463 aa30.12■■■□□ 2.41
CTSA-206ENST00000480961 ANKLE2Q86XL3 938 aa30.11■■■□□ 2.41
CTSA-206ENST00000480961 STRCQ7RTU9 1775 aa30.09■■■□□ 2.41
CTSA-206ENST00000480961 DMRT2Q9Y5R5 561 aa30.07■■■□□ 2.4
CTSA-206ENST00000480961 UBR1Q8IWV7 1749 aa30.07■■■□□ 2.4
CTSA-206ENST00000480961 LTKP29376 864 aa30.06■■■□□ 2.4
CTSA-206ENST00000480961 TXNDC2Q86VQ3 553 aa30.06■■■□□ 2.4
CTSA-206ENST00000480961 TMEM2Q9UHN6 1383 aa30.04■■■□□ 2.4
CTSA-206ENST00000480961 ADGRB3O60242 1522 aa30.04■■■□□ 2.4
CTSA-206ENST00000480961 SPHKAPQ2M3C7 1700 aa30.02■■■□□ 2.4
CTSA-206ENST00000480961 TRPM2O94759 1503 aa30.02■■■□□ 2.4
CTSA-206ENST00000480961 SENP3Q9H4L4 574 aaPredicted RBP30.02■■■□□ 2.4
CTSA-206ENST00000480961 EID1Q9Y6B2 187 aa30.02■■■□□ 2.4
CTSA-206ENST00000480961 NUTM2DQ5VT03 806 aaPredicted RBP30■■■□□ 2.39
CTSA-206ENST00000480961 ARHGAP23Q9P227 1491 aa29.99■■■□□ 2.39
CTSA-206ENST00000480961 ZNF326Q5BKZ1 582 aaKnown RBP29.98■■■□□ 2.39
CTSA-206ENST00000480961 SLIT1O75093 1534 aa29.97■■■□□ 2.39
CTSA-206ENST00000480961 TMEM131LA2VDJ0 1609 aa29.97■■■□□ 2.39
CTSA-206ENST00000480961 CLTCL1P53675 1640 aa29.97■■■□□ 2.39
CTSA-206ENST00000480961 SCAF11Q99590 1463 aaKnown RBP29.95■■■□□ 2.39
CTSA-206ENST00000480961 PCGF6Q9BYE7 350 aa29.95■■■□□ 2.39
CTSA-206ENST00000480961 NPHP4O75161 1426 aaPredicted RBP29.95■■■□□ 2.38
CTSA-206ENST00000480961 RIMS2Q9UQ26 1411 aa29.95■■■□□ 2.38
CTSA-206ENST00000480961 NEURL4Q96JN8 1562 aa29.94■■■□□ 2.38
CTSA-206ENST00000480961 CCDC144AA2RUR9 1427 aa29.92■■■□□ 2.38
CTSA-206ENST00000480961 PPP1R15AO75807 674 aaPredicted RBP29.92■■■□□ 2.38
CTSA-206ENST00000480961 KDM5AP29375 1690 aaKnown RBP29.91■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms