RNA–Protein interactions for RNA: ENST00000480624.5

MACF1-217, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 3

Gene MACF1, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-217ENST00000480624 UNC13BO14795 1591 aa16.64■□□□□ 0.25
MACF1-217ENST00000480624 EIF2AK4Q9P2K8 1649 aaKnown RBP16.62■□□□□ 0.25
MACF1-217ENST00000480624 KIF3BO15066 747 aa16.61■□□□□ 0.25
MACF1-217ENST00000480624 SLC4A1APQ9BWU0 796 aaKnown RBP16.61■□□□□ 0.25
MACF1-217ENST00000480624 ATP10AO60312 1499 aa16.61■□□□□ 0.25
MACF1-217ENST00000480624 ZEB1P37275 1124 aaPredicted RBP16.6■□□□□ 0.25
MACF1-217ENST00000480624 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.6■□□□□ 0.252e-7■■□□□ 11.6
MACF1-217ENST00000480624 DEPDC5O75140 1603 aa16.59■□□□□ 0.25
MACF1-217ENST00000480624 FAM135AQ9P2D6 1515 aa16.58■□□□□ 0.24
MACF1-217ENST00000480624 BCORL1Q5H9F3 1711 aa16.57■□□□□ 0.24
MACF1-217ENST00000480624 MROH1Q8NDA8 1641 aa16.57■□□□□ 0.24
MACF1-217ENST00000480624 PKD2Q13563 968 aa16.57■□□□□ 0.24
MACF1-217ENST00000480624 IQGAP3Q86VI3 1631 aa16.56■□□□□ 0.24
MACF1-217ENST00000480624 REREQ9P2R6 1566 aa16.56■□□□□ 0.24
MACF1-217ENST00000480624 FOXD1Q16676 465 aa16.56■□□□□ 0.24
MACF1-217ENST00000480624 RNF17Q9BXT8 1623 aaKnown RBP16.56■□□□□ 0.24
MACF1-217ENST00000480624 VWDEQ8N2E2 1590 aa16.55■□□□□ 0.24
MACF1-217ENST00000480624 ARHGEF40Q8TER5 1519 aa16.55■□□□□ 0.24
MACF1-217ENST00000480624 PRDM15P57071 1507 aaPredicted RBP16.55■□□□□ 0.24
MACF1-217ENST00000480624 SIN3AQ96ST3 1273 aa16.54■□□□□ 0.24
MACF1-217ENST00000480624 ANKRD30BQ9BXX2 1392 aa16.53■□□□□ 0.24
MACF1-217ENST00000480624 AGLP35573 1532 aa16.53■□□□□ 0.24
MACF1-217ENST00000480624 KANK1Q14678 1352 aa16.51■□□□□ 0.23
MACF1-217ENST00000480624 GGT6Q6P531 493 aa16.51■□□□□ 0.23
MACF1-217ENST00000480624 SIGLEC1Q9BZZ2 1709 aa16.5■□□□□ 0.23
MACF1-217ENST00000480624 LMTK2Q8IWU2 1503 aa16.49■□□□□ 0.23
MACF1-217ENST00000480624 NEUROD1Q13562 356 aa16.48■□□□□ 0.23
MACF1-217ENST00000480624 TET3O43151 1660 aa16.46■□□□□ 0.23
MACF1-217ENST00000480624 PLA2R1Q13018 1463 aa16.46■□□□□ 0.23
MACF1-217ENST00000480624 ABCC3O15438 1527 aa16.45■□□□□ 0.22
MACF1-217ENST00000480624 WASHC2CQ9Y4E1 1318 aa16.45■□□□□ 0.22
MACF1-217ENST00000480624 E9PCH4 1651 aa16.43■□□□□ 0.22
MACF1-217ENST00000480624 TIMELESSQ9UNS1 1208 aa16.43■□□□□ 0.22
MACF1-217ENST00000480624 PPP6R1Q9UPN7 881 aa16.43■□□□□ 0.22
MACF1-217ENST00000480624 EFCAB6Q5THR3 1501 aa16.43■□□□□ 0.22
MACF1-217ENST00000480624 CEP152O94986 1710 aa16.42■□□□□ 0.22
MACF1-217ENST00000480624 RPRD2Q5VT52 1461 aaKnown RBP16.42■□□□□ 0.22
MACF1-217ENST00000480624 PTPRTO14522 1441 aa16.41■□□□□ 0.22
MACF1-217ENST00000480624 MLECQ14165 292 aa16.39■□□□□ 0.21
MACF1-217ENST00000480624 ZC3H13Q5T200 1668 aaKnown RBP16.39■□□□□ 0.21
MACF1-217ENST00000480624 ARID4BQ4LE39 1312 aaPredicted RBP16.39■□□□□ 0.21
MACF1-217ENST00000480624 NPATQ14207 1427 aa16.38■□□□□ 0.21
MACF1-217ENST00000480624 ARHGAP31Q2M1Z3 1444 aa16.38■□□□□ 0.21
MACF1-217ENST00000480624 CAMSAP1Q5T5Y3 1602 aa16.37■□□□□ 0.21
MACF1-217ENST00000480624 TONSLQ96HA7 1378 aa16.37■□□□□ 0.21
MACF1-217ENST00000480624 TRPM2O94759 1503 aa16.35■□□□□ 0.21
MACF1-217ENST00000480624 CCDC144AA2RUR9 1427 aa16.35■□□□□ 0.21
MACF1-217ENST00000480624 PPP1R15AO75807 674 aaPredicted RBP16.34■□□□□ 0.21
MACF1-217ENST00000480624 L3MBTL2Q969R5 705 aa16.34■□□□□ 0.21
MACF1-217ENST00000480624 SPHKAPQ2M3C7 1700 aa16.33■□□□□ 0.21
MACF1-217ENST00000480624 NOS1P29475 1434 aa16.33■□□□□ 0.2
MACF1-217ENST00000480624 CLTCQ00610 1675 aaKnown RBP16.32■□□□□ 0.2
MACF1-217ENST00000480624 CLTCL1P53675 1640 aa16.3■□□□□ 0.2
MACF1-217ENST00000480624 CNTLNQ9NXG0 1405 aa16.3■□□□□ 0.2
MACF1-217ENST00000480624 FBXO31Q5XUX0 539 aaPredicted RBP16.29■□□□□ 0.2
MACF1-217ENST00000480624 UGGT1Q9NYU2 1555 aa16.29■□□□□ 0.2
MACF1-217ENST00000480624 SPATA31E1Q6ZUB1 1445 aa16.28■□□□□ 0.2
MACF1-217ENST00000480624 ZMYM3Q14202 1370 aa16.28■□□□□ 0.2
MACF1-217ENST00000480624 ESF1Q9H501 851 aaKnown RBP16.28■□□□□ 0.2
MACF1-217ENST00000480624 SYNMO15061 1565 aa16.27■□□□□ 0.2
MACF1-217ENST00000480624 ERVK-7P63135 1459 aa16.26■□□□□ 0.19
MACF1-217ENST00000480624 PREX1Q8TCU6 1659 aa16.26■□□□□ 0.19
MACF1-217ENST00000480624 RGL3Q3MIN7 710 aa16.24■□□□□ 0.19
MACF1-217ENST00000480624 MROH2AA6NES4 1674 aa16.24■□□□□ 0.19
MACF1-217ENST00000480624 PIK3C2BO00750 1634 aa16.23■□□□□ 0.19
MACF1-217ENST00000480624 SPATA31D1Q6ZQQ2 1576 aa16.23■□□□□ 0.19
MACF1-217ENST00000480624 NEURL4Q96JN8 1562 aa16.23■□□□□ 0.19
MACF1-217ENST00000480624 CFAP65Q6ZU64 1925 aaKnown RBP16.23■□□□□ 0.19
MACF1-217ENST00000480624 IDI1Q13907 227 aa16.22■□□□□ 0.19
MACF1-217ENST00000480624 NBPF8Q3BBV2 869 aa16.22■□□□□ 0.19
MACF1-217ENST00000480624 ILDR1Q86SU0 546 aaPredicted RBP16.22■□□□□ 0.19
MACF1-217ENST00000480624 SLC52A1Q9NWF4 448 aa16.22■□□□□ 0.19
MACF1-217ENST00000480624 DCAF11Q8TEB1 546 aa16.21■□□□□ 0.19
MACF1-217ENST00000480624 ADAMTSL3P82987 1691 aa16.2■□□□□ 0.18
MACF1-217ENST00000480624 FER1L4A9Z1Z3 1794 aa16.2■□□□□ 0.18
MACF1-217ENST00000480624 UHRF1BP1Q6BDS2 1440 aa16.19■□□□□ 0.18
MACF1-217ENST00000480624 ADGRB3O60242 1522 aa16.19■□□□□ 0.18
MACF1-217ENST00000480624 CEBPAP49715 358 aaPredicted RBP16.19■□□□□ 0.18
MACF1-217ENST00000480624 KDM4FA0A1W2PPD8 638 aa16.18■□□□□ 0.18
MACF1-217ENST00000480624 KDM2AQ9Y2K7 1162 aa16.18■□□□□ 0.18
MACF1-217ENST00000480624 MADDQ8WXG6 1647 aa16.18■□□□□ 0.18
MACF1-217ENST00000480624 KIF1BO60333 1816 aa16.17■□□□□ 0.18
MACF1-217ENST00000480624 TNRQ92752 1358 aa16.16■□□□□ 0.18
MACF1-217ENST00000480624 C3P01024 1663 aa16.16■□□□□ 0.18
MACF1-217ENST00000480624 CHGAP10645 457 aaKnown RBP16.16■□□□□ 0.18
MACF1-217ENST00000480624 STAC3Q96MF2 364 aa16.15■□□□□ 0.18
MACF1-217ENST00000480624 PRAG1Q86YV5 1406 aa16.14■□□□□ 0.17
MACF1-217ENST00000480624 TMEM131LA2VDJ0 1609 aa16.13■□□□□ 0.17
MACF1-217ENST00000480624 ZNF326Q5BKZ1 582 aaKnown RBP16.13■□□□□ 0.17
MACF1-217ENST00000480624 RIMS1Q86UR5 1692 aaKnown RBP16.13■□□□□ 0.17
MACF1-217ENST00000480624 RPGRIP1LQ68CZ1 1315 aa16.13■□□□□ 0.17
MACF1-217ENST00000480624 A2ML1A8K2U0 1454 aa16.1■□□□□ 0.17
MACF1-217ENST00000480624 MYOM2P54296 1465 aa16.1■□□□□ 0.17
MACF1-217ENST00000480624 IFT172Q9UG01 1749 aa16.1■□□□□ 0.17
MACF1-217ENST00000480624 RALGAPBQ86X10 1494 aa16.1■□□□□ 0.17
MACF1-217ENST00000480624 PLPPR3Q6T4P5 718 aa16.09■□□□□ 0.17
MACF1-217ENST00000480624 ADGRF5Q8IZF2 1346 aa16.09■□□□□ 0.17
MACF1-217ENST00000480624 NLRP1Q9C000 1473 aa16.08■□□□□ 0.16
MACF1-217ENST00000480624 NRXN1Q9ULB1 1477 aa16.08■□□□□ 0.16
MACF1-217ENST00000480624 NEXMIFQ5QGS0 1516 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms