RNA–Protein interactions for RNA: ENST00000480549.5

SH3D21-203, Transcript of SH3 domain containing 21, humanhuman

TSL 2

Gene SH3D21, Length 3,182 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-203ENST00000480549 WASHC2AQ641Q2 1341 aa23.5■■□□□ 1.35
SH3D21-203ENST00000480549 ATP7AQ04656 1500 aa23.5■■□□□ 1.35
SH3D21-203ENST00000480549 PLA2R1Q13018 1463 aa23.5■■□□□ 1.35
SH3D21-203ENST00000480549 POLR1AO95602 1720 aaPredicted RBP23.5■■□□□ 1.35
SH3D21-203ENST00000480549 NPM1P06748 294 aaKnown RBP eCLIP23.48■■□□□ 1.35
SH3D21-203ENST00000480549 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.48■■□□□ 1.352e-6■■□□□ 11.8
SH3D21-203ENST00000480549 DEPDC5O75140 1603 aa23.48■■□□□ 1.35
SH3D21-203ENST00000480549 SCAPERQ9BY12 1400 aa23.47■■□□□ 1.35
SH3D21-203ENST00000480549 ATP10AO60312 1499 aa23.44■■□□□ 1.34
SH3D21-203ENST00000480549 RALGAPBQ86X10 1494 aa23.44■■□□□ 1.34
SH3D21-203ENST00000480549 CCDC144AA2RUR9 1427 aa23.43■■□□□ 1.34
SH3D21-203ENST00000480549 KDM5CP41229 1560 aa23.43■■□□□ 1.34
SH3D21-203ENST00000480549 CFAP74Q9C0B2 1584 aa23.43■■□□□ 1.34
SH3D21-203ENST00000480549 C11orf95C9JLR9 678 aaPredicted RBP23.42■■□□□ 1.34
SH3D21-203ENST00000480549 KIDINS220Q9ULH0 1771 aa23.41■■□□□ 1.34
SH3D21-203ENST00000480549 E9PCH4 1651 aa23.41■■□□□ 1.34
SH3D21-203ENST00000480549 EIF2AK4Q9P2K8 1649 aaKnown RBP23.4■■□□□ 1.34
SH3D21-203ENST00000480549 CCDC7Q96M83 1385 aa23.4■■□□□ 1.34
SH3D21-203ENST00000480549 ANP32CO43423 234 aa23.39■■□□□ 1.34
SH3D21-203ENST00000480549 CD109Q6YHK3 1445 aa23.39■■□□□ 1.33
SH3D21-203ENST00000480549 ZNF326Q5BKZ1 582 aaKnown RBP23.38■■□□□ 1.33
SH3D21-203ENST00000480549 VWDEQ8N2E2 1590 aa23.37■■□□□ 1.33
SH3D21-203ENST00000480549 BCORL1Q5H9F3 1711 aa23.37■■□□□ 1.33
SH3D21-203ENST00000480549 ZNF518AQ6AHZ1 1483 aa23.36■■□□□ 1.33
SH3D21-203ENST00000480549 CCER2I3L3R5 266 aa23.36■■□□□ 1.33
SH3D21-203ENST00000480549 USP47Q96K76 1375 aa23.36■■□□□ 1.33
SH3D21-203ENST00000480549 CNTLNQ9NXG0 1405 aa23.35■■□□□ 1.33
SH3D21-203ENST00000480549 MROH1Q8NDA8 1641 aa23.35■■□□□ 1.33
SH3D21-203ENST00000480549 TET3O43151 1660 aa23.35■■□□□ 1.33
SH3D21-203ENST00000480549 DCAF11Q8TEB1 546 aa23.35■■□□□ 1.33
SH3D21-203ENST00000480549 TRPM1Q7Z4N2 1603 aa23.34■■□□□ 1.33
SH3D21-203ENST00000480549 A2MP01023 1474 aa23.33■■□□□ 1.33
SH3D21-203ENST00000480549 PRDM15P57071 1507 aaPredicted RBP23.33■■□□□ 1.33
SH3D21-203ENST00000480549 DHX29Q7Z478 1369 aaKnown RBP23.33■■□□□ 1.33
SH3D21-203ENST00000480549 SPHKAPQ2M3C7 1700 aa23.32■■□□□ 1.32
SH3D21-203ENST00000480549 KDM2AQ9Y2K7 1162 aa23.32■■□□□ 1.32
SH3D21-203ENST00000480549 KIF7Q2M1P5 1343 aa23.31■■□□□ 1.32
SH3D21-203ENST00000480549 POGZQ7Z3K3 1410 aa23.31■■□□□ 1.32
SH3D21-203ENST00000480549 PRAG1Q86YV5 1406 aa23.31■■□□□ 1.32
SH3D21-203ENST00000480549 TRPM2O94759 1503 aa23.3■■□□□ 1.32
SH3D21-203ENST00000480549 BCANQ96GW7 911 aa23.3■■□□□ 1.32
SH3D21-203ENST00000480549 RIMBP3CA6NJZ7 1639 aa23.3■■□□□ 1.32
SH3D21-203ENST00000480549 RIMBP3BA6NNM3 1639 aa23.3■■□□□ 1.32
SH3D21-203ENST00000480549 RIMBP3Q9UFD9 1639 aa23.3■■□□□ 1.32
SH3D21-203ENST00000480549 CEP152O94986 1710 aa23.27■■□□□ 1.32
SH3D21-203ENST00000480549 PTPRTO14522 1441 aa23.27■■□□□ 1.32
SH3D21-203ENST00000480549 HECW2Q9P2P5 1572 aa23.27■■□□□ 1.32
SH3D21-203ENST00000480549 ANO8Q9HCE9 1232 aaPredicted RBP23.26■■□□□ 1.31
SH3D21-203ENST00000480549 MAP3K4Q9Y6R4 1608 aa23.26■■□□□ 1.31
SH3D21-203ENST00000480549 MLH3Q9UHC1 1453 aa23.26■■□□□ 1.31
SH3D21-203ENST00000480549 NEO1Q92859 1461 aa23.25■■□□□ 1.31
SH3D21-203ENST00000480549 CARD11Q9BXL7 1154 aa23.25■■□□□ 1.31
SH3D21-203ENST00000480549 MYT1LQ9UL68 1186 aa23.25■■□□□ 1.31
SH3D21-203ENST00000480549 KIF3BO15066 747 aa23.25■■□□□ 1.31
SH3D21-203ENST00000480549 RGL3Q3MIN7 710 aa23.25■■□□□ 1.31
SH3D21-203ENST00000480549 RNF17Q9BXT8 1623 aaKnown RBP23.25■■□□□ 1.31
SH3D21-203ENST00000480549 CLTCL1P53675 1640 aa23.24■■□□□ 1.31
SH3D21-203ENST00000480549 FRMPD1Q5SYB0 1578 aa23.24■■□□□ 1.31
SH3D21-203ENST00000480549 KANK1Q14678 1352 aa23.24■■□□□ 1.31
SH3D21-203ENST00000480549 LAMC1P11047 1609 aa23.23■■□□□ 1.31
SH3D21-203ENST00000480549 ABCA6Q8N139 1617 aa23.22■■□□□ 1.31
SH3D21-203ENST00000480549 ROCK2O75116 1388 aaKnown RBP23.21■■□□□ 1.31
SH3D21-203ENST00000480549 RBM19Q9Y4C8 960 aaKnown RBP23.2■■□□□ 1.3
SH3D21-203ENST00000480549 GLI2P10070 1586 aa23.2■■□□□ 1.3
SH3D21-203ENST00000480549 CYB5RLQ6IPT4 315 aa23.2■■□□□ 1.3
SH3D21-203ENST00000480549 GPRASP1Q5JY77 1395 aa23.19■■□□□ 1.3
SH3D21-203ENST00000480549 EFCAB6Q5THR3 1501 aa23.19■■□□□ 1.3
SH3D21-203ENST00000480549 ARID4BQ4LE39 1312 aaPredicted RBP23.19■■□□□ 1.3
SH3D21-203ENST00000480549 LMTK2Q8IWU2 1503 aa23.18■■□□□ 1.3
SH3D21-203ENST00000480549 PPRC1Q5VV67 1664 aaKnown RBP23.18■■□□□ 1.3
SH3D21-203ENST00000480549 RICTORQ6R327 1708 aa23.18■■□□□ 1.3
SH3D21-203ENST00000480549 MADDQ8WXG6 1647 aa23.16■■□□□ 1.3
SH3D21-203ENST00000480549 ST20-MTHFSA0A0A6YYL1 179 aa23.14■■□□□ 1.3
SH3D21-203ENST00000480549 NEURL4Q96JN8 1562 aa23.14■■□□□ 1.3
SH3D21-203ENST00000480549 NBPF1Q3BBV0 1214 aa23.14■■□□□ 1.29
SH3D21-203ENST00000480549 PRKRIP1Q9H875 184 aaPredicted RBP23.12■■□□□ 1.29
SH3D21-203ENST00000480549 DIP2CQ9Y2E4 1556 aa23.11■■□□□ 1.29
SH3D21-203ENST00000480549 DIP2BQ9P265 1576 aa23.1■■□□□ 1.29
SH3D21-203ENST00000480549 RAPGEF3O95398 923 aa23.1■■□□□ 1.29
SH3D21-203ENST00000480549 UGGT1Q9NYU2 1555 aa23.09■■□□□ 1.29
SH3D21-203ENST00000480549 MSH5O43196 834 aa23.08■■□□□ 1.29
SH3D21-203ENST00000480549 KIF1BO60333 1816 aa23.08■■□□□ 1.28
SH3D21-203ENST00000480549 MROH2AA6NES4 1674 aa23.05■■□□□ 1.28
SH3D21-203ENST00000480549 IFT172Q9UG01 1749 aa23.05■■□□□ 1.28
SH3D21-203ENST00000480549 IQGAP1P46940 1657 aa23.04■■□□□ 1.28
SH3D21-203ENST00000480549 POLR3GLQ9BT43 218 aa23.04■■□□□ 1.28
SH3D21-203ENST00000480549 ABCC3O15438 1527 aa23.03■■□□□ 1.28
SH3D21-203ENST00000480549 CCDC184Q52MB2 194 aa23.03■■□□□ 1.28
SH3D21-203ENST00000480549 STAC3Q96MF2 364 aa23.02■■□□□ 1.28
SH3D21-203ENST00000480549 CAMSAP1Q5T5Y3 1602 aa23.01■■□□□ 1.27
SH3D21-203ENST00000480549 NPATQ14207 1427 aa23.01■■□□□ 1.27
SH3D21-203ENST00000480549 KIAA1210Q9ULL0 1709 aa23.01■■□□□ 1.27
SH3D21-203ENST00000480549 COL17A1Q9UMD9 1497 aaPredicted RBP23■■□□□ 1.27
SH3D21-203ENST00000480549 FKBP8Q14318 412 aa22.99■■□□□ 1.27
SH3D21-203ENST00000480549 TESK2Q96S53 571 aa22.99■■□□□ 1.27
SH3D21-203ENST00000480549 GGT6Q6P531 493 aa22.99■■□□□ 1.27
SH3D21-203ENST00000480549 ZMYM4Q5VZL5 1548 aa22.99■■□□□ 1.27
SH3D21-203ENST00000480549 YEATS2Q9ULM3 1422 aa22.98■■□□□ 1.27
SH3D21-203ENST00000480549 MYOM2P54296 1465 aa22.98■■□□□ 1.27
SH3D21-203ENST00000480549 TSPOAP1O95153 1857 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms