RNA–Protein interactions for RNA: ENST00000480438.1

HUWE1-211, Transcript of HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene HUWE1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HUWE1-211ENST00000480438 LRRIQ1Q96JM4 1722 aa23.18■■□□□ 1.3
HUWE1-211ENST00000480438 CDC42BPAQ5VT25 1732 aa23.16■■□□□ 1.3
HUWE1-211ENST00000480438 MED14O60244 1454 aa23.16■■□□□ 1.3
HUWE1-211ENST00000480438 KIAA1107Q9UPP5 1409 aa23.13■■□□□ 1.29
HUWE1-211ENST00000480438 GPATCH8Q9UKJ3 1502 aaKnown RBP23.13■■□□□ 1.29
HUWE1-211ENST00000480438 CFDP1Q9UEE9 299 aaPredicted RBP23.12■■□□□ 1.29
HUWE1-211ENST00000480438 INO80Q9ULG1 1556 aaPredicted RBP23.12■■□□□ 1.29
HUWE1-211ENST00000480438 RNF17Q9BXT8 1623 aaKnown RBP23.11■■□□□ 1.29
HUWE1-211ENST00000480438 STRCP1A6NGW2 1772 aa23.09■■□□□ 1.29
HUWE1-211ENST00000480438 MIA2Q96PC5 1412 aa23.09■■□□□ 1.29
HUWE1-211ENST00000480438 FAM135AQ9P2D6 1515 aa23.09■■□□□ 1.29
HUWE1-211ENST00000480438 KIF3BO15066 747 aa23.08■■□□□ 1.29
HUWE1-211ENST00000480438 PZPP20742 1482 aa23.08■■□□□ 1.29
HUWE1-211ENST00000480438 CCDC18Q5T9S5 1454 aa23.08■■□□□ 1.29
HUWE1-211ENST00000480438 UGGT1Q9NYU2 1555 aa23.08■■□□□ 1.29
HUWE1-211ENST00000480438 DEPDC5O75140 1603 aa23.08■■□□□ 1.28
HUWE1-211ENST00000480438 WASHC2CQ9Y4E1 1318 aa23.07■■□□□ 1.28
HUWE1-211ENST00000480438 PLEKHH2Q8IVE3 1493 aa23.06■■□□□ 1.28
HUWE1-211ENST00000480438 NLRP1Q9C000 1473 aa23.05■■□□□ 1.28
HUWE1-211ENST00000480438 DHX29Q7Z478 1369 aaKnown RBP23.04■■□□□ 1.28
HUWE1-211ENST00000480438 IQGAP1P46940 1657 aa23.04■■□□□ 1.28
HUWE1-211ENST00000480438 CASKIN1Q8WXD9 1431 aa23.04■■□□□ 1.28
HUWE1-211ENST00000480438 SYNMO15061 1565 aa23.01■■□□□ 1.27
HUWE1-211ENST00000480438 FAM135BQ49AJ0 1406 aa23.01■■□□□ 1.27
HUWE1-211ENST00000480438 ADGBQ8N7X0 1667 aa23.01■■□□□ 1.27
HUWE1-211ENST00000480438 UPF1Q92900 1129 aaKnown RBP eCLIP23.01■■□□□ 1.27
HUWE1-211ENST00000480438 SETD1AO15047 1707 aaKnown RBP23.01■■□□□ 1.27
HUWE1-211ENST00000480438 ZNF644Q9H582 1327 aaPredicted RBP23.01■■□□□ 1.27
HUWE1-211ENST00000480438 CCNB3Q8WWL7 1395 aa22.99■■□□□ 1.27
HUWE1-211ENST00000480438 KDM5DQ9BY66 1539 aa22.98■■□□□ 1.27
HUWE1-211ENST00000480438 RTEL1-TNFRSF6BF6WH68 1400 aa22.94■■□□□ 1.26
HUWE1-211ENST00000480438 CHIC1Q5VXU3 224 aa22.94■■□□□ 1.26
HUWE1-211ENST00000480438 MBD5Q9P267 1494 aa22.92■■□□□ 1.26
HUWE1-211ENST00000480438 LTKP29376 864 aa22.9■■□□□ 1.26
HUWE1-211ENST00000480438 TXNDC2Q86VQ3 553 aa22.89■■□□□ 1.25
HUWE1-211ENST00000480438 TRIM52Q96A61 297 aa22.89■■□□□ 1.25
HUWE1-211ENST00000480438 ZC3H13Q5T200 1668 aaKnown RBP22.87■■□□□ 1.25
HUWE1-211ENST00000480438 SCAF11Q99590 1463 aaKnown RBP22.86■■□□□ 1.25
HUWE1-211ENST00000480438 TMEM94Q12767 1356 aa22.86■■□□□ 1.25
HUWE1-211ENST00000480438 XIRP1Q702N8 1843 aaKnown RBP22.85■■□□□ 1.25
HUWE1-211ENST00000480438 RBM33Q96EV2 1170 aaKnown RBP22.85■■□□□ 1.25
HUWE1-211ENST00000480438 FYCO1Q9BQS8 1478 aa22.84■■□□□ 1.25
HUWE1-211ENST00000480438 ROBO1Q9Y6N7 1651 aa22.81■■□□□ 1.24
HUWE1-211ENST00000480438 JCADQ9P266 1359 aa22.81■■□□□ 1.24
HUWE1-211ENST00000480438 MTUS2Q5JR59 1369 aa22.8■■□□□ 1.24
HUWE1-211ENST00000480438 PROSER2Q86WR7 435 aaPredicted RBP22.8■■□□□ 1.24
HUWE1-211ENST00000480438 EID1Q9Y6B2 187 aa22.8■■□□□ 1.24
HUWE1-211ENST00000480438 ZNF772Q68DY9 489 aaPredicted RBP22.79■■□□□ 1.24
HUWE1-211ENST00000480438 ERVK-7P63135 1459 aa22.78■■□□□ 1.24
HUWE1-211ENST00000480438 NCOA2Q15596 1464 aa22.78■■□□□ 1.24
HUWE1-211ENST00000480438 KCNA6P17658 529 aa22.77■■□□□ 1.24
HUWE1-211ENST00000480438 MEX3CQ5U5Q3 659 aaKnown RBP22.77■■□□□ 1.24
HUWE1-211ENST00000480438 RXRBP28702 533 aa22.75■■□□□ 1.23
HUWE1-211ENST00000480438 SLAIN2Q9P270 581 aa22.75■■□□□ 1.23
HUWE1-211ENST00000480438 ARHGAP23Q9P227 1491 aa22.74■■□□□ 1.23
HUWE1-211ENST00000480438 RSPH4AQ5TD94 716 aa22.73■■□□□ 1.23
HUWE1-211ENST00000480438 CCDC141Q6ZP82 1450 aa22.73■■□□□ 1.23
HUWE1-211ENST00000480438 ABCC3O15438 1527 aa22.72■■□□□ 1.23
HUWE1-211ENST00000480438 UBR1Q8IWV7 1749 aa22.72■■□□□ 1.23
HUWE1-211ENST00000480438 SRCAPQ6ZRS2 3230 aa22.72■■□□□ 1.23
HUWE1-211ENST00000480438 LRRC9Q6ZRR7 1453 aa22.72■■□□□ 1.23
HUWE1-211ENST00000480438 SLIT1O75093 1534 aa22.72■■□□□ 1.23
HUWE1-211ENST00000480438 TIAM1Q13009 1591 aa22.72■■□□□ 1.23
HUWE1-211ENST00000480438 SLC26A8Q96RN1 970 aa22.7■■□□□ 1.22
HUWE1-211ENST00000480438 MAP3K1Q13233 1512 aa22.7■■□□□ 1.22
HUWE1-211ENST00000480438 LRP6O75581 1613 aa22.69■■□□□ 1.22
HUWE1-211ENST00000480438 SPATA31A6Q5VVP1 1343 aa22.69■■□□□ 1.22
HUWE1-211ENST00000480438 PHLPP1O60346 1717 aa22.68■■□□□ 1.22
HUWE1-211ENST00000480438 TSPY4P0CV99 314 aa22.68■■□□□ 1.22
HUWE1-211ENST00000480438 TSPY10P0CW01 314 aa22.68■■□□□ 1.22
HUWE1-211ENST00000480438 MSH6P52701 1360 aa22.67■■□□□ 1.22
HUWE1-211ENST00000480438 TMEM2Q9UHN6 1383 aa22.65■■□□□ 1.22
HUWE1-211ENST00000480438 STAG3Q9UJ98 1225 aa22.65■■□□□ 1.22
HUWE1-211ENST00000480438 CFAP65Q6ZU64 1925 aaKnown RBP22.64■■□□□ 1.21
HUWE1-211ENST00000480438 PRDM15P57071 1507 aaPredicted RBP22.62■■□□□ 1.21
HUWE1-211ENST00000480438 CAMSAP2Q08AD1 1489 aa22.62■■□□□ 1.21
HUWE1-211ENST00000480438 CEP162Q5TB80 1403 aa22.59■■□□□ 1.21
HUWE1-211ENST00000480438 FGD6Q6ZV73 1430 aa22.59■■□□□ 1.21
HUWE1-211ENST00000480438 CDK12Q9NYV4 1490 aaPredicted RBP22.59■■□□□ 1.21
HUWE1-211ENST00000480438 COL16A1Q07092 1604 aaPredicted RBP22.58■■□□□ 1.21
HUWE1-211ENST00000480438 NUTM2BA6NNL0 878 aaPredicted RBP22.58■■□□□ 1.21
HUWE1-211ENST00000480438 NUTM2EB1AL46 878 aaPredicted RBP22.58■■□□□ 1.21
HUWE1-211ENST00000480438 NUTM2AQ8IVF1 878 aaPredicted RBP22.58■■□□□ 1.21
HUWE1-211ENST00000480438 BCANQ96GW7 911 aa22.57■■□□□ 1.2
HUWE1-211ENST00000480438 NKTRP30414 1462 aaKnown RBP22.55■■□□□ 1.2
HUWE1-211ENST00000480438 EHBP1L1Q8N3D4 1523 aa22.54■■□□□ 1.2
HUWE1-211ENST00000480438 TET3O43151 1660 aa22.54■■□□□ 1.2
HUWE1-211ENST00000480438 AFF2P51816 1311 aa22.54■■□□□ 1.2
HUWE1-211ENST00000480438 NUTM2DQ5VT03 806 aaPredicted RBP22.53■■□□□ 1.2
HUWE1-211ENST00000480438 MROH1Q8NDA8 1641 aa22.53■■□□□ 1.2
HUWE1-211ENST00000480438 IDI1Q13907 227 aa22.52■■□□□ 1.2
HUWE1-211ENST00000480438 CEP152O94986 1710 aa22.51■■□□□ 1.19
HUWE1-211ENST00000480438 ARHGAP31Q2M1Z3 1444 aa22.51■■□□□ 1.19
HUWE1-211ENST00000480438 PIK3C2BO00750 1634 aa22.51■■□□□ 1.19
HUWE1-211ENST00000480438 ZRANB1Q9UGI0 708 aa22.5■■□□□ 1.19
HUWE1-211ENST00000480438 ARHGEF5Q12774 1597 aa22.5■■□□□ 1.19
HUWE1-211ENST00000480438 C14orf37Q86TY3 774 aa22.49■■□□□ 1.19
HUWE1-211ENST00000480438 QTRT2Q9H974 415 aaKnown RBP22.49■■□□□ 1.19
HUWE1-211ENST00000480438 EFCAB6Q5THR3 1501 aa22.48■■□□□ 1.19
HUWE1-211ENST00000480438 NWD1Q149M9 1564 aa22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 107.2 ms