RNA–Protein interactions for RNA: ENST00000480362.5

UPF3A-206, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 965 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-206ENST00000480362 UNC13BO14795 1591 aa25.85■■□□□ 1.73
UPF3A-206ENST00000480362 SLC4A1APQ9BWU0 796 aaKnown RBP25.83■■□□□ 1.73
UPF3A-206ENST00000480362 PZPP20742 1482 aa25.83■■□□□ 1.73
UPF3A-206ENST00000480362 KDM5DQ9BY66 1539 aa25.82■■□□□ 1.72
UPF3A-206ENST00000480362 CLSPNQ9HAW4 1339 aa25.8■■□□□ 1.72
UPF3A-206ENST00000480362 ARHGEF40Q8TER5 1519 aa25.79■■□□□ 1.72
UPF3A-206ENST00000480362 DEPDC5O75140 1603 aa25.77■■□□□ 1.72
UPF3A-206ENST00000480362 REREQ9P2R6 1566 aa25.77■■□□□ 1.72
UPF3A-206ENST00000480362 BCORL1Q5H9F3 1711 aa25.76■■□□□ 1.71
UPF3A-206ENST00000480362 FAM135AQ9P2D6 1515 aa25.75■■□□□ 1.71
UPF3A-206ENST00000480362 IQGAP3Q86VI3 1631 aa25.74■■□□□ 1.71
UPF3A-206ENST00000480362 KANK1Q14678 1352 aa25.74■■□□□ 1.71
UPF3A-206ENST00000480362 PKD2Q13563 968 aa25.74■■□□□ 1.71
UPF3A-206ENST00000480362 GGT6Q6P531 493 aa25.74■■□□□ 1.71
UPF3A-206ENST00000480362 RNF17Q9BXT8 1623 aaKnown RBP25.74■■□□□ 1.71
UPF3A-206ENST00000480362 FOXD1Q16676 465 aa25.73■■□□□ 1.71
UPF3A-206ENST00000480362 MROH1Q8NDA8 1641 aa25.73■■□□□ 1.71
UPF3A-206ENST00000480362 ZEB1P37275 1124 aaPredicted RBP25.71■■□□□ 1.71
UPF3A-206ENST00000480362 AGLP35573 1532 aa25.71■■□□□ 1.71
UPF3A-206ENST00000480362 PRDM15P57071 1507 aaPredicted RBP25.71■■□□□ 1.71
UPF3A-206ENST00000480362 VWDEQ8N2E2 1590 aa25.69■■□□□ 1.7
UPF3A-206ENST00000480362 SIGLEC1Q9BZZ2 1709 aa25.66■■□□□ 1.7
UPF3A-206ENST00000480362 SIN3AQ96ST3 1273 aa25.65■■□□□ 1.7
UPF3A-206ENST00000480362 ANKRD30BQ9BXX2 1392 aa25.63■■□□□ 1.69
UPF3A-206ENST00000480362 WASHC2CQ9Y4E1 1318 aa25.63■■□□□ 1.69
UPF3A-206ENST00000480362 ARID4BQ4LE39 1312 aaPredicted RBP25.62■■□□□ 1.69
UPF3A-206ENST00000480362 NEUROD1Q13562 356 aa25.61■■□□□ 1.69
UPF3A-206ENST00000480362 TET3O43151 1660 aa25.61■■□□□ 1.69
UPF3A-206ENST00000480362 LMTK2Q8IWU2 1503 aa25.6■■□□□ 1.69
UPF3A-206ENST00000480362 CEP152O94986 1710 aa25.6■■□□□ 1.69
UPF3A-206ENST00000480362 MLECQ14165 292 aa25.59■■□□□ 1.69
UPF3A-206ENST00000480362 PPP6R1Q9UPN7 881 aa25.58■■□□□ 1.69
UPF3A-206ENST00000480362 ABCC3O15438 1527 aa25.58■■□□□ 1.68
UPF3A-206ENST00000480362 E9PCH4 1651 aa25.55■■□□□ 1.68
UPF3A-206ENST00000480362 EFCAB6Q5THR3 1501 aa25.53■■□□□ 1.68
UPF3A-206ENST00000480362 ZC3H13Q5T200 1668 aaKnown RBP25.53■■□□□ 1.68
UPF3A-206ENST00000480362 PLA2R1Q13018 1463 aa25.5■■□□□ 1.67
UPF3A-206ENST00000480362 CAMSAP1Q5T5Y3 1602 aa25.5■■□□□ 1.67
UPF3A-206ENST00000480362 RPRD2Q5VT52 1461 aaKnown RBP25.47■■□□□ 1.67
UPF3A-206ENST00000480362 NPATQ14207 1427 aa25.46■■□□□ 1.67
UPF3A-206ENST00000480362 ESF1Q9H501 851 aaKnown RBP25.46■■□□□ 1.67
UPF3A-206ENST00000480362 TIMELESSQ9UNS1 1208 aa25.46■■□□□ 1.67
UPF3A-206ENST00000480362 PTPRTO14522 1441 aa25.46■■□□□ 1.67
UPF3A-206ENST00000480362 ARHGAP31Q2M1Z3 1444 aa25.46■■□□□ 1.67
UPF3A-206ENST00000480362 CLTCQ00610 1675 aaKnown RBP25.45■■□□□ 1.67
UPF3A-206ENST00000480362 TONSLQ96HA7 1378 aa25.44■■□□□ 1.66
UPF3A-206ENST00000480362 SPHKAPQ2M3C7 1700 aa25.43■■□□□ 1.66
UPF3A-206ENST00000480362 CCDC144AA2RUR9 1427 aa25.43■■□□□ 1.66
UPF3A-206ENST00000480362 TRPM2O94759 1503 aa25.4■■□□□ 1.66
UPF3A-206ENST00000480362 CFAP65Q6ZU64 1925 aaKnown RBP25.39■■□□□ 1.65
UPF3A-206ENST00000480362 CNTLNQ9NXG0 1405 aa25.37■■□□□ 1.65
UPF3A-206ENST00000480362 ZMYM3Q14202 1370 aa25.36■■□□□ 1.65
UPF3A-206ENST00000480362 NOS1P29475 1434 aa25.36■■□□□ 1.65
UPF3A-206ENST00000480362 FBXO31Q5XUX0 539 aaPredicted RBP25.35■■□□□ 1.65
UPF3A-206ENST00000480362 L3MBTL2Q969R5 705 aa25.34■■□□□ 1.65
UPF3A-206ENST00000480362 CLTCL1P53675 1640 aa25.34■■□□□ 1.65
UPF3A-206ENST00000480362 PREX1Q8TCU6 1659 aa25.32■■□□□ 1.64
UPF3A-206ENST00000480362 PPP1R15AO75807 674 aaPredicted RBP25.31■■□□□ 1.64
UPF3A-206ENST00000480362 FER1L4A9Z1Z3 1794 aa25.31■■□□□ 1.64
UPF3A-206ENST00000480362 UGGT1Q9NYU2 1555 aa25.31■■□□□ 1.64
UPF3A-206ENST00000480362 MROH2AA6NES4 1674 aa25.3■■□□□ 1.64
UPF3A-206ENST00000480362 ERVK-7P63135 1459 aa25.29■■□□□ 1.64
UPF3A-206ENST00000480362 SYNMO15061 1565 aa25.29■■□□□ 1.64
UPF3A-206ENST00000480362 RGL3Q3MIN7 710 aa25.27■■□□□ 1.64
UPF3A-206ENST00000480362 SLC52A1Q9NWF4 448 aa25.25■■□□□ 1.63
UPF3A-206ENST00000480362 SPATA31D1Q6ZQQ2 1576 aa25.25■■□□□ 1.63
UPF3A-206ENST00000480362 ADAMTSL3P82987 1691 aa25.25■■□□□ 1.63
UPF3A-206ENST00000480362 MADDQ8WXG6 1647 aa25.24■■□□□ 1.63
UPF3A-206ENST00000480362 SPATA31E1Q6ZUB1 1445 aa25.24■■□□□ 1.63
UPF3A-206ENST00000480362 CEBPAP49715 358 aaPredicted RBP25.24■■□□□ 1.63
UPF3A-206ENST00000480362 IDI1Q13907 227 aa25.23■■□□□ 1.63
UPF3A-206ENST00000480362 PIK3C2BO00750 1634 aa25.23■■□□□ 1.63
UPF3A-206ENST00000480362 KIF1BO60333 1816 aa25.22■■□□□ 1.63
UPF3A-206ENST00000480362 CHGAP10645 457 aaKnown RBP25.21■■□□□ 1.63
UPF3A-206ENST00000480362 DCAF11Q8TEB1 546 aa25.21■■□□□ 1.63
UPF3A-206ENST00000480362 C3P01024 1663 aa25.2■■□□□ 1.63
UPF3A-206ENST00000480362 RIMS1Q86UR5 1692 aaKnown RBP25.2■■□□□ 1.63
UPF3A-206ENST00000480362 PLPPR3Q6T4P5 718 aa25.19■■□□□ 1.62
UPF3A-206ENST00000480362 KDM2AQ9Y2K7 1162 aa25.19■■□□□ 1.62
UPF3A-206ENST00000480362 NEURL4Q96JN8 1562 aa25.18■■□□□ 1.62
UPF3A-206ENST00000480362 TNRQ92752 1358 aa25.18■■□□□ 1.62
UPF3A-206ENST00000480362 ADGRB3O60242 1522 aa25.15■■□□□ 1.62
UPF3A-206ENST00000480362 NBPF8Q3BBV2 869 aa25.14■■□□□ 1.62
UPF3A-206ENST00000480362 ZNF326Q5BKZ1 582 aaKnown RBP25.13■■□□□ 1.61
UPF3A-206ENST00000480362 STAG3Q9UJ98 1225 aa25.1■■□□□ 1.61
UPF3A-206ENST00000480362 TMEM131LA2VDJ0 1609 aa25.09■■□□□ 1.61
UPF3A-206ENST00000480362 STAC3Q96MF2 364 aa25.09■■□□□ 1.61
UPF3A-206ENST00000480362 UHRF1BP1Q6BDS2 1440 aa25.09■■□□□ 1.61
UPF3A-206ENST00000480362 RPGRIP1LQ68CZ1 1315 aa25.09■■□□□ 1.61
UPF3A-206ENST00000480362 MYO5BQ9ULV0 1848 aa25.05■■□□□ 1.6
UPF3A-206ENST00000480362 NLRP1Q9C000 1473 aa25.04■■□□□ 1.6
UPF3A-206ENST00000480362 PRAG1Q86YV5 1406 aa25.03■■□□□ 1.6
UPF3A-206ENST00000480362 PTPRMP28827 1452 aa25.03■■□□□ 1.6
UPF3A-206ENST00000480362 IFT172Q9UG01 1749 aa25.03■■□□□ 1.6
UPF3A-206ENST00000480362 A2ML1A8K2U0 1454 aa25.02■■□□□ 1.6
UPF3A-206ENST00000480362 PPLO60437 1756 aa25.01■■□□□ 1.59
UPF3A-206ENST00000480362 MYOM2P54296 1465 aa25■■□□□ 1.59
UPF3A-206ENST00000480362 NEXMIFQ5QGS0 1516 aa25■■□□□ 1.59
UPF3A-206ENST00000480362 ADGRF5Q8IZF2 1346 aa24.99■■□□□ 1.59
UPF3A-206ENST00000480362 KDM4FA0A1W2PPD8 638 aa24.97■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms