RNA–Protein interactions for RNA: ENST00000480102.1

PTCD3-213, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-213ENST00000480102 ST18O60284 1047 aa8.22□□□□□ -1.09
PTCD3-213ENST00000480102 HOXB3P14651 431 aaPredicted RBP8.22□□□□□ -1.09
PTCD3-213ENST00000480102 TMC2Q8TDI7 906 aa8.22□□□□□ -1.09
PTCD3-213ENST00000480102 RUSC2Q8N2Y8 1516 aa8.22□□□□□ -1.09
PTCD3-213ENST00000480102 CYB5RLQ6IPT4 315 aa8.21□□□□□ -1.1
PTCD3-213ENST00000480102 PRG4Q92954 1404 aaPredicted RBP8.2□□□□□ -1.1
PTCD3-213ENST00000480102 DOK7Q18PE1 504 aa8.2□□□□□ -1.1
PTCD3-213ENST00000480102 CARMIL2Q6F5E8 1435 aa8.2□□□□□ -1.1
PTCD3-213ENST00000480102 SPRYD3Q8NCJ5 442 aa8.19□□□□□ -1.1
PTCD3-213ENST00000480102 UGGT2Q9NYU1 1516 aa8.19□□□□□ -1.1
PTCD3-213ENST00000480102 SLC24A1O60721 1099 aa8.18□□□□□ -1.1
PTCD3-213ENST00000480102 GPHNQ9NQX3 736 aaPredicted RBP8.18□□□□□ -1.1
PTCD3-213ENST00000480102 CRISPLD2Q9H0B8 497 aa8.17□□□□□ -1.1
PTCD3-213ENST00000480102 UHRF1BP1LA0JNW5 1464 aa8.16□□□□□ -1.1
PTCD3-213ENST00000480102 RIMBP2O15034 1052 aa8.16□□□□□ -1.1
PTCD3-213ENST00000480102 FOXK1P85037 733 aa8.16□□□□□ -1.1
PTCD3-213ENST00000480102 PAXIP1Q6ZW49 1069 aaPredicted RBP8.16□□□□□ -1.1
PTCD3-213ENST00000480102 ZNF710Q8N1W2 664 aa8.16□□□□□ -1.1
PTCD3-213ENST00000480102 TNIKQ9UKE5 1360 aa8.16□□□□□ -1.1
PTCD3-213ENST00000480102 IQGAP2Q13576 1575 aa8.15□□□□□ -1.1
PTCD3-213ENST00000480102 GOLGA3Q08378 1498 aa8.15□□□□□ -1.1
PTCD3-213ENST00000480102 NCKAP5LQ9HCH0 1330 aa8.15□□□□□ -1.1
PTCD3-213ENST00000480102 CFAP44Q96MT7 982 aa8.15□□□□□ -1.1
PTCD3-213ENST00000480102 PTPRGP23470 1445 aa8.14□□□□□ -1.11
PTCD3-213ENST00000480102 DSG2Q14126 1118 aa8.14□□□□□ -1.11
PTCD3-213ENST00000480102 ZSWIM6Q9HCJ5 1215 aa8.14□□□□□ -1.11
PTCD3-213ENST00000480102 DISP1Q96F81 1524 aa8.13□□□□□ -1.11
PTCD3-213ENST00000480102 PDE4AP27815 886 aa8.13□□□□□ -1.11
PTCD3-213ENST00000480102 CADPS2Q86UW7 1296 aa8.13□□□□□ -1.11
PTCD3-213ENST00000480102 SLC34A2O95436 690 aa8.12□□□□□ -1.11
PTCD3-213ENST00000480102 HOXB1P14653 301 aaPredicted RBP8.12□□□□□ -1.11
PTCD3-213ENST00000480102 PLPP6Q8IY26 295 aa8.12□□□□□ -1.11
PTCD3-213ENST00000480102 MARVELD3Q96A59 401 aa8.12□□□□□ -1.11
PTCD3-213ENST00000480102 MAPKBP1O60336 1514 aa8.12□□□□□ -1.11
PTCD3-213ENST00000480102 GPR153Q6NV75 609 aa8.11□□□□□ -1.11
PTCD3-213ENST00000480102 ERCC6L2Q5T890 1561 aa8.1□□□□□ -1.11
PTCD3-213ENST00000480102 EMP3P54852 163 aa8.1□□□□□ -1.11
PTCD3-213ENST00000480102 PPP1R15BQ5SWA1 713 aa8.1□□□□□ -1.11
PTCD3-213ENST00000480102 UACAQ9BZF9 1416 aa8.1□□□□□ -1.11
PTCD3-213ENST00000480102 ABCC2Q92887 1545 aa8.09□□□□□ -1.11
PTCD3-213ENST00000480102 MFSD10Q14728 455 aa8.09□□□□□ -1.11
PTCD3-213ENST00000480102 FAM9AQ8IZU1 332 aaPredicted RBP8.09□□□□□ -1.11
PTCD3-213ENST00000480102 DDX27Q96GQ7 796 aaKnown RBP8.09□□□□□ -1.11
PTCD3-213ENST00000480102 LARP6Q9BRS8 491 aaKnown RBP8.09□□□□□ -1.11
PTCD3-213ENST00000480102 KIF21BO75037 1637 aa8.09□□□□□ -1.11
PTCD3-213ENST00000480102 KDM5BQ9UGL1 1544 aa8.08□□□□□ -1.12
PTCD3-213ENST00000480102 ARSIQ5FYB1 569 aa8.07□□□□□ -1.12
PTCD3-213ENST00000480102 KIAA0556O60303 1618 aa8.07□□□□□ -1.12
PTCD3-213ENST00000480102 ABCC10Q5T3U5 1492 aa8.06□□□□□ -1.12
PTCD3-213ENST00000480102 PTCD2Q8WV60 388 aaKnown RBP8.06□□□□□ -1.12
PTCD3-213ENST00000480102 PCDHGA4Q9Y5G9 962 aa8.06□□□□□ -1.12
PTCD3-213ENST00000480102 PLB1Q6P1J6 1458 aa8.06□□□□□ -1.12
PTCD3-213ENST00000480102 EFCAB5A4FU69 1503 aa8.05□□□□□ -1.12
PTCD3-213ENST00000480102 KHSRPQ92945 711 aaKnown RBP eCLIP8.05□□□□□ -1.123e-7■■■□□ 14.6
PTCD3-213ENST00000480102 FAM205CA6NFA0 338 aa8.04□□□□□ -1.12
PTCD3-213ENST00000480102 HS3ST6Q96QI5 342 aa8.04□□□□□ -1.12
PTCD3-213ENST00000480102 SAMD9Q5K651 1589 aa8.03□□□□□ -1.12
PTCD3-213ENST00000480102 ADCY10Q96PN6 1610 aa8.03□□□□□ -1.12
PTCD3-213ENST00000480102 NUDT7P0C024 238 aa8.02□□□□□ -1.13
PTCD3-213ENST00000480102 OXER1Q8TDS5 423 aa8.02□□□□□ -1.13
PTCD3-213ENST00000480102 ERBB3P21860 1342 aa8.02□□□□□ -1.13
PTCD3-213ENST00000480102 ABCA8O94911 1581 aa8.01□□□□□ -1.13
PTCD3-213ENST00000480102 GLI2P10070 1586 aa8.01□□□□□ -1.13
PTCD3-213ENST00000480102 POTEB3A0JP26 581 aa8.01□□□□□ -1.13
PTCD3-213ENST00000480102 TBC1D12O60347 775 aa8.01□□□□□ -1.13
PTCD3-213ENST00000480102 PLCB2Q00722 1185 aa8.01□□□□□ -1.13
PTCD3-213ENST00000480102 POTEBQ6S5H4 581 aa8.01□□□□□ -1.13
PTCD3-213ENST00000480102 CDAN1Q8IWY9 1227 aa8.01□□□□□ -1.13
PTCD3-213ENST00000480102 CTTNBP2Q8WZ74 1663 aa8□□□□□ -1.13
PTCD3-213ENST00000480102 UPF1Q92900 1129 aaKnown RBP eCLIP8□□□□□ -1.13
PTCD3-213ENST00000480102 FMN1Q68DA7 1419 aa8□□□□□ -1.13
PTCD3-213ENST00000480102 ASXL2Q76L83 1435 aa8□□□□□ -1.13
PTCD3-213ENST00000480102 KDM4FA0A1W2PPD8 638 aa7.99□□□□□ -1.13
PTCD3-213ENST00000480102 ZNF316A6NFI3 1004 aaPredicted RBP7.99□□□□□ -1.13
PTCD3-213ENST00000480102 VARS2Q5ST30 1063 aaKnown RBP7.99□□□□□ -1.13
PTCD3-213ENST00000480102 PHLDB1Q86UU1 1377 aa7.98□□□□□ -1.13
PTCD3-213ENST00000480102 CAMK2BQ13554 666 aa7.98□□□□□ -1.13
PTCD3-213ENST00000480102 TSHZ2Q9NRE2 1034 aa7.98□□□□□ -1.13
PTCD3-213ENST00000480102 EMILIN3Q9NT22 766 aa7.98□□□□□ -1.13
PTCD3-213ENST00000480102 WDR7Q9Y4E6 1490 aa7.98□□□□□ -1.13
PTCD3-213ENST00000480102 LHX6Q9UPM6 363 aa7.97□□□□□ -1.13
PTCD3-213ENST00000480102 DIP2BQ9P265 1576 aa7.97□□□□□ -1.13
PTCD3-213ENST00000480102 ATP10BO94823 1461 aa7.96□□□□□ -1.13
PTCD3-213ENST00000480102 FAM69CQ0P6D2 419 aa7.96□□□□□ -1.14
PTCD3-213ENST00000480102 EPRSP07814 1512 aaKnown RBP7.96□□□□□ -1.14
PTCD3-213ENST00000480102 NUP153P49790 1475 aaKnown RBP7.95□□□□□ -1.14
PTCD3-213ENST00000480102 MAGI3Q5TCQ9 1506 aa7.95□□□□□ -1.14
PTCD3-213ENST00000480102 UBTFP17480 764 aaKnown RBP7.95□□□□□ -1.14
PTCD3-213ENST00000480102 ARHGAP35Q9NRY4 1499 aa7.94□□□□□ -1.14
PTCD3-213ENST00000480102 ZNF687Q8N1G0 1237 aa7.94□□□□□ -1.14
PTCD3-213ENST00000480102 WDR70Q9NW82 654 aa7.94□□□□□ -1.14
PTCD3-213ENST00000480102 TEX14Q8IWB6 1497 aa7.94□□□□□ -1.14
PTCD3-213ENST00000480102 PSDA5PKW4 1024 aaPredicted RBP7.93□□□□□ -1.14
PTCD3-213ENST00000480102 MAP3K9P80192 1104 aa7.93□□□□□ -1.14
PTCD3-213ENST00000480102 EVI5O60447 810 aa7.92□□□□□ -1.14
PTCD3-213ENST00000480102 KRTAP3-3Q9BYR6 98 aa7.92□□□□□ -1.14
PTCD3-213ENST00000480102 KRTAP3-2Q9BYR7 98 aa7.92□□□□□ -1.14
PTCD3-213ENST00000480102 CDK11AQ9UQ88 783 aaPredicted RBP7.92□□□□□ -1.14
PTCD3-213ENST00000480102 FHOD3Q2V2M9 1422 aa7.92□□□□□ -1.14
PTCD3-213ENST00000480102 CASKIN1Q8WXD9 1431 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms