RNA–Protein interactions for RNA: ENST00000480022.1

CHD6-208, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 2

Gene CHD6, Length 2,829 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-208ENST00000480022 HNRNPUQ00839 825 aaKnown RBP eCLIP14.84□□□□□ -0.03
CHD6-208ENST00000480022 ZNF518AQ6AHZ1 1483 aa14.83□□□□□ -0.04
CHD6-208ENST00000480022 IPO9Q96P70 1041 aaKnown RBP14.83□□□□□ -0.04
CHD6-208ENST00000480022 DNMT1P26358 1616 aaKnown RBP14.82□□□□□ -0.04
CHD6-208ENST00000480022 ANP32AP39687 249 aaKnown RBP14.82□□□□□ -0.04
CHD6-208ENST00000480022 PTPRKQ15262 1439 aa14.82□□□□□ -0.04
CHD6-208ENST00000480022 KLHL34Q8N239 644 aa14.81□□□□□ -0.04
CHD6-208ENST00000480022 FRMPD1Q5SYB0 1578 aa14.81□□□□□ -0.04
CHD6-208ENST00000480022 TSPY4P0CV99 314 aa14.8□□□□□ -0.04
CHD6-208ENST00000480022 TSPY10P0CW01 314 aa14.8□□□□□ -0.04
CHD6-208ENST00000480022 ZBTB47Q9UFB7 747 aaPredicted RBP14.8□□□□□ -0.04
CHD6-208ENST00000480022 B4GALNT3Q6L9W6 998 aa14.8□□□□□ -0.04
CHD6-208ENST00000480022 WASHC2AQ641Q2 1341 aa14.8□□□□□ -0.04
CHD6-208ENST00000480022 KDM6BO15054 1643 aa14.79□□□□□ -0.04
CHD6-208ENST00000480022 CHIC2Q9UKJ5 165 aa14.79□□□□□ -0.04
CHD6-208ENST00000480022 KDM5CP41229 1560 aa14.79□□□□□ -0.04
CHD6-208ENST00000480022 RICTORQ6R327 1708 aa14.79□□□□□ -0.04
CHD6-208ENST00000480022 SPAG9O60271 1321 aaKnown RBP14.79□□□□□ -0.04
CHD6-208ENST00000480022 TIMELESSQ9UNS1 1208 aa14.79□□□□□ -0.04
CHD6-208ENST00000480022 C9orf84Q5VXU9 1444 aa14.78□□□□□ -0.04
CHD6-208ENST00000480022 SHANK2Q9UPX8 1470 aa14.78□□□□□ -0.04
CHD6-208ENST00000480022 C11orf95C9JLR9 678 aaPredicted RBP14.78□□□□□ -0.04
CHD6-208ENST00000480022 MLH3Q9UHC1 1453 aa14.76□□□□□ -0.05
CHD6-208ENST00000480022 ZMYM4Q5VZL5 1548 aa14.76□□□□□ -0.05
CHD6-208ENST00000480022 RTEL1-TNFRSF6BF6WH68 1400 aa14.76□□□□□ -0.05
CHD6-208ENST00000480022 CROCC2H7BZ55 1655 aa14.76□□□□□ -0.05
CHD6-208ENST00000480022 ZFYVE16Q7Z3T8 1539 aa14.75□□□□□ -0.05
CHD6-208ENST00000480022 MAST1Q9Y2H9 1570 aa14.75□□□□□ -0.05
CHD6-208ENST00000480022 RAB3GAP2Q9H2M9 1393 aa14.75□□□□□ -0.05
CHD6-208ENST00000480022 HIRIP3Q9BW71 556 aaPredicted RBP14.74□□□□□ -0.05
CHD6-208ENST00000480022 ATP7AQ04656 1500 aa14.74□□□□□ -0.05
CHD6-208ENST00000480022 INO80Q9ULG1 1556 aaPredicted RBP14.74□□□□□ -0.05
CHD6-208ENST00000480022 HECW2Q9P2P5 1572 aa14.74□□□□□ -0.05
CHD6-208ENST00000480022 ADGRL2O95490 1459 aa14.73□□□□□ -0.05
CHD6-208ENST00000480022 MAGI2Q86UL8 1455 aa14.73□□□□□ -0.05
CHD6-208ENST00000480022 NCOA1Q15788 1441 aa14.73□□□□□ -0.05
CHD6-208ENST00000480022 YEATS2Q9ULM3 1422 aa14.73□□□□□ -0.05
CHD6-208ENST00000480022 ROCK1Q13464 1354 aa14.73□□□□□ -0.05
CHD6-208ENST00000480022 ANKRD30AQ9BXX3 1397 aa14.72□□□□□ -0.05
CHD6-208ENST00000480022 RRP7BPQ9NSQ0 103 aa14.72□□□□□ -0.05
CHD6-208ENST00000480022 WASHC2CQ9Y4E1 1318 aa14.72□□□□□ -0.05
CHD6-208ENST00000480022 PKNOX2Q96KN3 472 aa14.72□□□□□ -0.05
CHD6-208ENST00000480022 USP35Q9P2H5 1018 aa14.72□□□□□ -0.05
CHD6-208ENST00000480022 KIDINS220Q9ULH0 1771 aa14.71□□□□□ -0.05
CHD6-208ENST00000480022 KIF15Q9NS87 1388 aa14.7□□□□□ -0.06
CHD6-208ENST00000480022 SIN3AQ96ST3 1273 aa14.7□□□□□ -0.06
CHD6-208ENST00000480022 PLXNC1O60486 1568 aa14.69□□□□□ -0.06
CHD6-208ENST00000480022 ABCA6Q8N139 1617 aa14.68□□□□□ -0.06
CHD6-208ENST00000480022 DIP2CQ9Y2E4 1556 aa14.68□□□□□ -0.06
CHD6-208ENST00000480022 ADGBQ8N7X0 1667 aa14.67□□□□□ -0.06
CHD6-208ENST00000480022 ARHGEF40Q8TER5 1519 aa14.67□□□□□ -0.06
CHD6-208ENST00000480022 HFM1A2PYH4 1435 aa14.67□□□□□ -0.06
CHD6-208ENST00000480022 NAIPQ13075 1403 aa14.67□□□□□ -0.06
CHD6-208ENST00000480022 NEFMP07197 916 aa14.66□□□□□ -0.06
CHD6-208ENST00000480022 ATP10AO60312 1499 aa14.66□□□□□ -0.06
CHD6-208ENST00000480022 DHX29Q7Z478 1369 aaKnown RBP14.66□□□□□ -0.06
CHD6-208ENST00000480022 A2MP01023 1474 aa14.65□□□□□ -0.06
CHD6-208ENST00000480022 DUOX2Q9NRD8 1548 aa14.64□□□□□ -0.07
CHD6-208ENST00000480022 SETD5Q9C0A6 1442 aa14.64□□□□□ -0.07
CHD6-208ENST00000480022 ANKRD50Q9ULJ7 1429 aa14.63□□□□□ -0.07
CHD6-208ENST00000480022 BRPF3Q9ULD4 1205 aa14.63□□□□□ -0.07
CHD6-208ENST00000480022 ERBINQ96RT1 1412 aa14.62□□□□□ -0.07
CHD6-208ENST00000480022 REREQ9P2R6 1566 aa14.61□□□□□ -0.07
CHD6-208ENST00000480022 RSPH6AQ9H0K4 717 aa14.6□□□□□ -0.07
CHD6-208ENST00000480022 GCC2Q8IWJ2 1684 aa14.6□□□□□ -0.07
CHD6-208ENST00000480022 PPM1GO15355 546 aaPredicted RBP14.59□□□□□ -0.07
CHD6-208ENST00000480022 LAS1LQ9Y4W2 734 aaKnown RBP14.59□□□□□ -0.07
CHD6-208ENST00000480022 KIF3BO15066 747 aa14.59□□□□□ -0.07
CHD6-208ENST00000480022 SIGLEC1Q9BZZ2 1709 aa14.58□□□□□ -0.08
CHD6-208ENST00000480022 ZBED9Q6R2W3 1325 aa14.57□□□□□ -0.08
CHD6-208ENST00000480022 AGLP35573 1532 aa14.57□□□□□ -0.08
CHD6-208ENST00000480022 HOMEZQ8IX15 550 aa14.56□□□□□ -0.08
CHD6-208ENST00000480022 ARID4BQ4LE39 1312 aaPredicted RBP14.56□□□□□ -0.08
CHD6-208ENST00000480022 EIF2AK4Q9P2K8 1649 aaKnown RBP14.55□□□□□ -0.08
CHD6-208ENST00000480022 GSE1Q14687 1217 aa14.55□□□□□ -0.08
CHD6-208ENST00000480022 GGT6Q6P531 493 aa14.54□□□□□ -0.08
CHD6-208ENST00000480022 GLIPR1L2Q4G1C9 344 aa14.53□□□□□ -0.08
CHD6-208ENST00000480022 MLECQ14165 292 aa14.53□□□□□ -0.08
CHD6-208ENST00000480022 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.53□□□□□ -0.081e-7■■□□□ 13.7
CHD6-208ENST00000480022 BCORL1Q5H9F3 1711 aa14.52□□□□□ -0.08
CHD6-208ENST00000480022 NPM2Q86SE8 214 aaKnown RBP14.52□□□□□ -0.09
CHD6-208ENST00000480022 RNF17Q9BXT8 1623 aaKnown RBP14.51□□□□□ -0.09
CHD6-208ENST00000480022 TONSLQ96HA7 1378 aa14.51□□□□□ -0.09
CHD6-208ENST00000480022 MROH1Q8NDA8 1641 aa14.5□□□□□ -0.09
CHD6-208ENST00000480022 NUP155O75694 1391 aa14.5□□□□□ -0.09
CHD6-208ENST00000480022 DEPDC5O75140 1603 aa14.5□□□□□ -0.09
CHD6-208ENST00000480022 UNC13BO14795 1591 aa14.5□□□□□ -0.09
CHD6-208ENST00000480022 TULP1O00294 542 aaPredicted RBP14.49□□□□□ -0.09
CHD6-208ENST00000480022 FAM9BQ8IZU0 186 aa14.49□□□□□ -0.09
CHD6-208ENST00000480022 PRDM15P57071 1507 aaPredicted RBP14.49□□□□□ -0.09
CHD6-208ENST00000480022 CCDC184Q52MB2 194 aa14.49□□□□□ -0.09
CHD6-208ENST00000480022 AMER1Q5JTC6 1135 aaPredicted RBP14.48□□□□□ -0.09
CHD6-208ENST00000480022 FAM43AQ8N2R8 423 aa14.48□□□□□ -0.09
CHD6-208ENST00000480022 KANK1Q14678 1352 aa14.47□□□□□ -0.09
CHD6-208ENST00000480022 PPP6R1Q9UPN7 881 aa14.47□□□□□ -0.09
CHD6-208ENST00000480022 VWDEQ8N2E2 1590 aa14.46□□□□□ -0.09
CHD6-208ENST00000480022 PDIA4P13667 645 aaKnown RBP14.46□□□□□ -0.09
CHD6-208ENST00000480022 KDM5DQ9BY66 1539 aa14.46□□□□□ -0.09
CHD6-208ENST00000480022 SMG6Q86US8 1419 aaKnown RBP14.46□□□□□ -0.1
CHD6-208ENST00000480022 RNF123Q5XPI4 1314 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 255.3 ms