RNA–Protein interactions for RNA: ENST00000479707.1

AGRN-208, Transcript of agrin, humanhuman

TSL 3

Gene AGRN, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGRN-208ENST00000479707 CNTLNQ9NXG0 1405 aa28.74■■■□□ 2.19
AGRN-208ENST00000479707 PPP6R1Q9UPN7 881 aa28.73■■■□□ 2.19
AGRN-208ENST00000479707 C3P01024 1663 aa28.73■■■□□ 2.19
AGRN-208ENST00000479707 EIF2AK4Q9P2K8 1649 aaKnown RBP28.72■■■□□ 2.19
AGRN-208ENST00000479707 ERBINQ96RT1 1412 aa28.7■■■□□ 2.19
AGRN-208ENST00000479707 ZMYM3Q14202 1370 aa28.7■■■□□ 2.18
AGRN-208ENST00000479707 WASHC2CQ9Y4E1 1318 aa28.69■■■□□ 2.18
AGRN-208ENST00000479707 RNF17Q9BXT8 1623 aaKnown RBP28.68■■■□□ 2.18
AGRN-208ENST00000479707 MROH2AA6NES4 1674 aa28.67■■■□□ 2.18
AGRN-208ENST00000479707 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.67■■■□□ 2.18
AGRN-208ENST00000479707 KDM5DQ9BY66 1539 aa28.64■■■□□ 2.17
AGRN-208ENST00000479707 ROCK1Q13464 1354 aa28.63■■■□□ 2.17
AGRN-208ENST00000479707 MROH1Q8NDA8 1641 aa28.62■■■□□ 2.17
AGRN-208ENST00000479707 ANKRD50Q9ULJ7 1429 aa28.62■■■□□ 2.17
AGRN-208ENST00000479707 CEP152O94986 1710 aa28.58■■■□□ 2.17
AGRN-208ENST00000479707 SETD1BQ9UPS6 1966 aaKnown RBP28.57■■■□□ 2.16
AGRN-208ENST00000479707 ABCC3O15438 1527 aa28.56■■■□□ 2.16
AGRN-208ENST00000479707 FAM135AQ9P2D6 1515 aa28.56■■■□□ 2.16
AGRN-208ENST00000479707 DEPDC5O75140 1603 aa28.55■■■□□ 2.16
AGRN-208ENST00000479707 FBXO31Q5XUX0 539 aaPredicted RBP28.55■■■□□ 2.16
AGRN-208ENST00000479707 LMTK3Q96Q04 1460 aa28.54■■■□□ 2.16
AGRN-208ENST00000479707 ZC3H13Q5T200 1668 aaKnown RBP28.54■■■□□ 2.16
AGRN-208ENST00000479707 PREX1Q8TCU6 1659 aa28.54■■■□□ 2.16
AGRN-208ENST00000479707 PRDM15P57071 1507 aaPredicted RBP28.53■■■□□ 2.16
AGRN-208ENST00000479707 KANK1Q14678 1352 aa28.53■■■□□ 2.16
AGRN-208ENST00000479707 HSPA2P54652 639 aa28.52■■■□□ 2.16
AGRN-208ENST00000479707 NPATQ14207 1427 aa28.51■■■□□ 2.15
AGRN-208ENST00000479707 CFAP65Q6ZU64 1925 aaKnown RBP28.5■■■□□ 2.15
AGRN-208ENST00000479707 UHRF1BP1Q6BDS2 1440 aa28.5■■■□□ 2.15
AGRN-208ENST00000479707 PZPP20742 1482 aa28.48■■■□□ 2.15
AGRN-208ENST00000479707 CAMSAP1Q5T5Y3 1602 aa28.48■■■□□ 2.15
AGRN-208ENST00000479707 VWDEQ8N2E2 1590 aa28.44■■■□□ 2.14
AGRN-208ENST00000479707 NAIPQ13075 1403 aa28.43■■■□□ 2.14
AGRN-208ENST00000479707 UNC13BO14795 1591 aa28.41■■■□□ 2.14
AGRN-208ENST00000479707 TNRQ92752 1358 aa28.41■■■□□ 2.14
AGRN-208ENST00000479707 GCC2Q8IWJ2 1684 aa28.41■■■□□ 2.14
AGRN-208ENST00000479707 MYO3AQ8NEV4 1616 aa28.39■■■□□ 2.13
AGRN-208ENST00000479707 LMTK2Q8IWU2 1503 aa28.38■■■□□ 2.13
AGRN-208ENST00000479707 NUP155O75694 1391 aa28.37■■■□□ 2.13
AGRN-208ENST00000479707 HFM1A2PYH4 1435 aa28.37■■■□□ 2.13
AGRN-208ENST00000479707 ARHGAP31Q2M1Z3 1444 aa28.36■■■□□ 2.13
AGRN-208ENST00000479707 ERVK-7P63135 1459 aa28.36■■■□□ 2.13
AGRN-208ENST00000479707 SPATA31D1Q6ZQQ2 1576 aa28.33■■■□□ 2.13
AGRN-208ENST00000479707 EFCAB6Q5THR3 1501 aa28.32■■■□□ 2.12
AGRN-208ENST00000479707 CEP170BQ9Y4F5 1589 aaPredicted RBP28.32■■■□□ 2.12
AGRN-208ENST00000479707 TRIM52Q96A61 297 aa28.31■■■□□ 2.12
AGRN-208ENST00000479707 IQGAP3Q86VI3 1631 aa28.31■■■□□ 2.12
AGRN-208ENST00000479707 TET3O43151 1660 aa28.31■■■□□ 2.12
AGRN-208ENST00000479707 ZNF142P52746 1687 aaPredicted RBP28.29■■■□□ 2.12
AGRN-208ENST00000479707 A2ML1A8K2U0 1454 aa28.28■■■□□ 2.12
AGRN-208ENST00000479707 NLRP1Q9C000 1473 aa28.25■■■□□ 2.11
AGRN-208ENST00000479707 E9PCH4 1651 aa28.23■■■□□ 2.11
AGRN-208ENST00000479707 STRCQ7RTU9 1775 aa28.22■■■□□ 2.11
AGRN-208ENST00000479707 RPRD2Q5VT52 1461 aaKnown RBP28.21■■■□□ 2.11
AGRN-208ENST00000479707 UGGT1Q9NYU2 1555 aa28.2■■■□□ 2.11
AGRN-208ENST00000479707 NCKAP5LQ9HCH0 1330 aa28.19■■■□□ 2.1
AGRN-208ENST00000479707 NOS1P29475 1434 aa28.19■■■□□ 2.1
AGRN-208ENST00000479707 SETD5Q9C0A6 1442 aa28.19■■■□□ 2.1
AGRN-208ENST00000479707 SYNMO15061 1565 aa28.19■■■□□ 2.1
AGRN-208ENST00000479707 IDI1Q13907 227 aa28.18■■■□□ 2.1
AGRN-208ENST00000479707 THEMISQ8N1K5 641 aaPredicted RBP28.18■■■□□ 2.1
AGRN-208ENST00000479707 STAG3Q9UJ98 1225 aa28.15■■■□□ 2.1
AGRN-208ENST00000479707 PIK3C2BO00750 1634 aa28.14■■■□□ 2.1
AGRN-208ENST00000479707 SLC4A1APQ9BWU0 796 aaKnown RBP28.14■■■□□ 2.1
AGRN-208ENST00000479707 UBR1Q8IWV7 1749 aa28.12■■■□□ 2.09
AGRN-208ENST00000479707 PLA2R1Q13018 1463 aa28.11■■■□□ 2.09
AGRN-208ENST00000479707 PKD2Q13563 968 aa28.11■■■□□ 2.09
AGRN-208ENST00000479707 SLC52A1Q9NWF4 448 aa28.11■■■□□ 2.09
AGRN-208ENST00000479707 DMRT2Q9Y5R5 561 aa28.11■■■□□ 2.09
AGRN-208ENST00000479707 RAB3GAP2Q9H2M9 1393 aa28.11■■■□□ 2.09
AGRN-208ENST00000479707 ANKLE2Q86XL3 938 aa28.07■■■□□ 2.08
AGRN-208ENST00000479707 CHGAP10645 457 aaKnown RBP28.06■■■□□ 2.08
AGRN-208ENST00000479707 SPHKAPQ2M3C7 1700 aa28.05■■■□□ 2.08
AGRN-208ENST00000479707 FOXD1Q16676 465 aa28.04■■■□□ 2.08
AGRN-208ENST00000479707 MPHOSPH9Q99550 1183 aa28.04■■■□□ 2.08
AGRN-208ENST00000479707 POLR1AO95602 1720 aaPredicted RBP28.04■■■□□ 2.08
AGRN-208ENST00000479707 PTPRTO14522 1441 aa28.02■■■□□ 2.08
AGRN-208ENST00000479707 MYO5BQ9ULV0 1848 aa28.02■■■□□ 2.08
AGRN-208ENST00000479707 ADGRB3O60242 1522 aa28■■■□□ 2.07
AGRN-208ENST00000479707 ACIN1Q9UKV3 1341 aaKnown RBP27.99■■■□□ 2.07
AGRN-208ENST00000479707 TXNDC2Q86VQ3 553 aa27.99■■■□□ 2.07
AGRN-208ENST00000479707 KDM5AP29375 1690 aaKnown RBP27.98■■■□□ 2.07
AGRN-208ENST00000479707 LTKP29376 864 aa27.98■■■□□ 2.07
AGRN-208ENST00000479707 NEURL4Q96JN8 1562 aa27.98■■■□□ 2.07
AGRN-208ENST00000479707 TMEM2Q9UHN6 1383 aa27.97■■■□□ 2.07
AGRN-208ENST00000479707 EID1Q9Y6B2 187 aa27.96■■■□□ 2.07
AGRN-208ENST00000479707 SLIT1O75093 1534 aa27.96■■■□□ 2.07
AGRN-208ENST00000479707 TMEM131LA2VDJ0 1609 aa27.96■■■□□ 2.07
AGRN-208ENST00000479707 ARHGAP23Q9P227 1491 aa27.95■■■□□ 2.07
AGRN-208ENST00000479707 NPHP4O75161 1426 aaPredicted RBP27.93■■■□□ 2.06
AGRN-208ENST00000479707 TRPM2O94759 1503 aa27.93■■■□□ 2.06
AGRN-208ENST00000479707 CLTCL1P53675 1640 aa27.92■■■□□ 2.06
AGRN-208ENST00000479707 SCAF11Q99590 1463 aaKnown RBP27.92■■■□□ 2.06
AGRN-208ENST00000479707 HRCP23327 699 aa27.92■■■□□ 2.06
AGRN-208ENST00000479707 TRIM26Q12899 539 aaPredicted RBP27.91■■■□□ 2.06
AGRN-208ENST00000479707 SENP3Q9H4L4 574 aaPredicted RBP27.91■■■□□ 2.06
AGRN-208ENST00000479707 MED14O60244 1454 aa27.89■■■□□ 2.06
AGRN-208ENST00000479707 NUTM2DQ5VT03 806 aaPredicted RBP27.89■■■□□ 2.06
AGRN-208ENST00000479707 IQGAP1P46940 1657 aa27.88■■■□□ 2.05
AGRN-208ENST00000479707 RIMS2Q9UQ26 1411 aa27.87■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 156.2 ms