RNA–Protein interactions for RNA: ENST00000479398.5

PKP4-209, Transcript of plakophilin 4, humanhuman

TSL 5

Gene PKP4, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-209ENST00000479398 KIF15Q9NS87 1388 aa31.87■■■□□ 2.69
PKP4-209ENST00000479398 WASHC2CQ9Y4E1 1318 aa31.86■■■□□ 2.69
PKP4-209ENST00000479398 PREX1Q8TCU6 1659 aa31.86■■■□□ 2.69
PKP4-209ENST00000479398 ANKRD30AQ9BXX3 1397 aa31.84■■■□□ 2.69
PKP4-209ENST00000479398 NPATQ14207 1427 aa31.83■■■□□ 2.69
PKP4-209ENST00000479398 UHRF1BP1Q6BDS2 1440 aa31.82■■■□□ 2.68
PKP4-209ENST00000479398 EIF2AK4Q9P2K8 1649 aaKnown RBP31.81■■■□□ 2.68
PKP4-209ENST00000479398 NCOA1Q15788 1441 aa31.81■■■□□ 2.68
PKP4-209ENST00000479398 PTPRKQ15262 1439 aa31.78■■■□□ 2.68
PKP4-209ENST00000479398 FAM135AQ9P2D6 1515 aa31.78■■■□□ 2.68
PKP4-209ENST00000479398 RNF17Q9BXT8 1623 aaKnown RBP31.78■■■□□ 2.68
PKP4-209ENST00000479398 KDM5DQ9BY66 1539 aa31.77■■■□□ 2.68
PKP4-209ENST00000479398 ERBINQ96RT1 1412 aa31.76■■■□□ 2.68
PKP4-209ENST00000479398 ADGRL2O95490 1459 aa31.74■■■□□ 2.67
PKP4-209ENST00000479398 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.73■■■□□ 2.673e-7■■■■□ 24.5
PKP4-209ENST00000479398 FBXO31Q5XUX0 539 aaPredicted RBP31.71■■■□□ 2.67
PKP4-209ENST00000479398 MROH1Q8NDA8 1641 aa31.69■■■□□ 2.66
PKP4-209ENST00000479398 PZPP20742 1482 aa31.67■■■□□ 2.66
PKP4-209ENST00000479398 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.67■■■□□ 2.66
PKP4-209ENST00000479398 ABCC3O15438 1527 aa31.66■■■□□ 2.66
PKP4-209ENST00000479398 ITGAEP38570 1179 aa31.66■■■□□ 2.66
PKP4-209ENST00000479398 ZC3H13Q5T200 1668 aaKnown RBP31.64■■■□□ 2.65
PKP4-209ENST00000479398 RRBP1Q9P2E9 1410 aaKnown RBP31.61■■■□□ 2.65
PKP4-209ENST00000479398 ROCK1Q13464 1354 aa31.61■■■□□ 2.65
PKP4-209ENST00000479398 ANKRD50Q9ULJ7 1429 aa31.6■■■□□ 2.65
PKP4-209ENST00000479398 KANK1Q14678 1352 aa31.6■■■□□ 2.65
PKP4-209ENST00000479398 TNRQ92752 1358 aa31.6■■■□□ 2.65
PKP4-209ENST00000479398 PRDM15P57071 1507 aaPredicted RBP31.59■■■□□ 2.65
PKP4-209ENST00000479398 CEP152O94986 1710 aa31.59■■■□□ 2.65
PKP4-209ENST00000479398 DEPDC5O75140 1603 aa31.59■■■□□ 2.65
PKP4-209ENST00000479398 MYO3AQ8NEV4 1616 aa31.57■■■□□ 2.64
PKP4-209ENST00000479398 STRCQ7RTU9 1775 aa31.57■■■□□ 2.64
PKP4-209ENST00000479398 DMRT2Q9Y5R5 561 aa31.56■■■□□ 2.64
PKP4-209ENST00000479398 CFAP65Q6ZU64 1925 aaKnown RBP31.55■■■□□ 2.64
PKP4-209ENST00000479398 CAMSAP1Q5T5Y3 1602 aa31.53■■■□□ 2.64
PKP4-209ENST00000479398 CEP170BQ9Y4F5 1589 aaPredicted RBP31.53■■■□□ 2.64
PKP4-209ENST00000479398 ZNF142P52746 1687 aaPredicted RBP31.52■■■□□ 2.64
PKP4-209ENST00000479398 A2ML1A8K2U0 1454 aa31.52■■■□□ 2.64
PKP4-209ENST00000479398 ARHGAP31Q2M1Z3 1444 aa31.51■■■□□ 2.64
PKP4-209ENST00000479398 VWDEQ8N2E2 1590 aa31.49■■■□□ 2.63
PKP4-209ENST00000479398 SPATA31D1Q6ZQQ2 1576 aa31.47■■■□□ 2.63
PKP4-209ENST00000479398 ERVK-7P63135 1459 aa31.47■■■□□ 2.63
PKP4-209ENST00000479398 NLRP1Q9C000 1473 aa31.46■■■□□ 2.63
PKP4-209ENST00000479398 LMTK2Q8IWU2 1503 aa31.46■■■□□ 2.63
PKP4-209ENST00000479398 NCKAP5LQ9HCH0 1330 aa31.45■■■□□ 2.62
PKP4-209ENST00000479398 THEMISQ8N1K5 641 aaPredicted RBP31.43■■■□□ 2.62
PKP4-209ENST00000479398 PTPRTO14522 1441 aa31.42■■■□□ 2.62
PKP4-209ENST00000479398 PKD2Q13563 968 aa31.42■■■□□ 2.62
PKP4-209ENST00000479398 PLA2R1Q13018 1463 aa31.41■■■□□ 2.62
PKP4-209ENST00000479398 UGGT1Q9NYU2 1555 aa31.36■■■□□ 2.61
PKP4-209ENST00000479398 UNC13BO14795 1591 aa31.35■■■□□ 2.61
PKP4-209ENST00000479398 EFCAB6Q5THR3 1501 aa31.33■■■□□ 2.61
PKP4-209ENST00000479398 ANKLE2Q86XL3 938 aa31.32■■■□□ 2.6
PKP4-209ENST00000479398 NUP155O75694 1391 aa31.31■■■□□ 2.6
PKP4-209ENST00000479398 NAIPQ13075 1403 aa31.29■■■□□ 2.6
PKP4-209ENST00000479398 TET3O43151 1660 aa31.29■■■□□ 2.6
PKP4-209ENST00000479398 NOS1P29475 1434 aa31.28■■■□□ 2.6
PKP4-209ENST00000479398 IDI1Q13907 227 aa31.28■■■□□ 2.6
PKP4-209ENST00000479398 RPRD2Q5VT52 1461 aaKnown RBP31.27■■■□□ 2.6
PKP4-209ENST00000479398 IQGAP3Q86VI3 1631 aa31.24■■■□□ 2.59
PKP4-209ENST00000479398 CERKQ8TCT0 537 aa31.24■■■□□ 2.59
PKP4-209ENST00000479398 SLC52A1Q9NWF4 448 aa31.24■■■□□ 2.59
PKP4-209ENST00000479398 GCC2Q8IWJ2 1684 aa31.24■■■□□ 2.59
PKP4-209ENST00000479398 UBR1Q8IWV7 1749 aa31.24■■■□□ 2.59
PKP4-209ENST00000479398 ILDR1Q86SU0 546 aaPredicted RBP31.23■■■□□ 2.59
PKP4-209ENST00000479398 STAG3Q9UJ98 1225 aa31.22■■■□□ 2.59
PKP4-209ENST00000479398 HFM1A2PYH4 1435 aa31.21■■■□□ 2.59
PKP4-209ENST00000479398 SYNMO15061 1565 aa31.21■■■□□ 2.59
PKP4-209ENST00000479398 POLR1AO95602 1720 aaPredicted RBP31.21■■■□□ 2.59
PKP4-209ENST00000479398 PIK3C2BO00750 1634 aa31.19■■■□□ 2.58
PKP4-209ENST00000479398 E9PCH4 1651 aa31.17■■■□□ 2.58
PKP4-209ENST00000479398 NEURL4Q96JN8 1562 aa31.17■■■□□ 2.58
PKP4-209ENST00000479398 FBXO41Q8TF61 875 aa31.15■■■□□ 2.58
PKP4-209ENST00000479398 MED14O60244 1454 aa31.14■■■□□ 2.58
PKP4-209ENST00000479398 TXNDC2Q86VQ3 553 aa31.14■■■□□ 2.58
PKP4-209ENST00000479398 LTKP29376 864 aa31.13■■■□□ 2.57
PKP4-209ENST00000479398 TRIM52Q96A61 297 aa31.12■■■□□ 2.57
PKP4-209ENST00000479398 ZNF335Q9H4Z2 1342 aaPredicted RBP31.12■■■□□ 2.57
PKP4-209ENST00000479398 NPHP4O75161 1426 aaPredicted RBP31.12■■■□□ 2.57
PKP4-209ENST00000479398 ARHGAP23Q9P227 1491 aa31.12■■■□□ 2.57
PKP4-209ENST00000479398 KDM5AP29375 1690 aaKnown RBP31.12■■■□□ 2.57
PKP4-209ENST00000479398 SLIT1O75093 1534 aa31.11■■■□□ 2.57
PKP4-209ENST00000479398 LTBP4Q8N2S1 1624 aa31.11■■■□□ 2.57
PKP4-209ENST00000479398 EID1Q9Y6B2 187 aa31.11■■■□□ 2.57
PKP4-209ENST00000479398 TMEM2Q9UHN6 1383 aa31.1■■■□□ 2.57
PKP4-209ENST00000479398 SCAF11Q99590 1463 aaKnown RBP31.07■■■□□ 2.56
PKP4-209ENST00000479398 ADGRB3O60242 1522 aa31.03■■■□□ 2.56
PKP4-209ENST00000479398 IQGAP1P46940 1657 aa31.03■■■□□ 2.56
PKP4-209ENST00000479398 CHGAP10645 457 aaKnown RBP31.02■■■□□ 2.56
PKP4-209ENST00000479398 SLC4A1APQ9BWU0 796 aaKnown RBP30.99■■■□□ 2.55
PKP4-209ENST00000479398 HDGFP51858 240 aaKnown RBP30.98■■■□□ 2.55
PKP4-209ENST00000479398 TMEM131LA2VDJ0 1609 aa30.98■■■□□ 2.55
PKP4-209ENST00000479398 MYO5BQ9ULV0 1848 aa30.97■■■□□ 2.55
PKP4-209ENST00000479398 SPHKAPQ2M3C7 1700 aa30.95■■■□□ 2.54
PKP4-209ENST00000479398 SETD5Q9C0A6 1442 aa30.92■■■□□ 2.54
PKP4-209ENST00000479398 IQSEC2Q5JU85 1478 aa30.92■■■□□ 2.54
PKP4-209ENST00000479398 ACIN1Q9UKV3 1341 aaKnown RBP30.92■■■□□ 2.54
PKP4-209ENST00000479398 RIMS2Q9UQ26 1411 aa30.9■■■□□ 2.54
PKP4-209ENST00000479398 ZFYVE9O95405 1425 aa30.9■■■□□ 2.54
PKP4-209ENST00000479398 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.89■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms