RNA–Protein interactions for RNA: ENST00000479365.5

SSR1-206, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 1,118 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-206ENST00000479365 MADDQ8WXG6 1647 aa11.78□□□□□ -0.52
SSR1-206ENST00000479365 MAGI2Q86UL8 1455 aa11.78□□□□□ -0.52
SSR1-206ENST00000479365 CD44P16070 742 aaKnown RBP11.77□□□□□ -0.53
SSR1-206ENST00000479365 TAOK2Q9UL54 1235 aa11.77□□□□□ -0.53
SSR1-206ENST00000479365 ARHGEF12Q9NZN5 1544 aa11.76□□□□□ -0.53
SSR1-206ENST00000479365 GSE1Q14687 1217 aa11.76□□□□□ -0.53
SSR1-206ENST00000479365 CDC42BPBQ9Y5S2 1711 aa11.76□□□□□ -0.53
SSR1-206ENST00000479365 KDM5CP41229 1560 aa11.75□□□□□ -0.53
SSR1-206ENST00000479365 PREX2Q70Z35 1606 aa11.75□□□□□ -0.53
SSR1-206ENST00000479365 AFAP1Q8N556 730 aa11.75□□□□□ -0.53
SSR1-206ENST00000479365 C19orf67A6NJJ6 358 aa11.74□□□□□ -0.53
SSR1-206ENST00000479365 CEP162Q5TB80 1403 aa11.74□□□□□ -0.53
SSR1-206ENST00000479365 ATP10AO60312 1499 aa11.74□□□□□ -0.53
SSR1-206ENST00000479365 ZNF518AQ6AHZ1 1483 aa11.74□□□□□ -0.53
SSR1-206ENST00000479365 ABCC1P33527 1531 aa11.74□□□□□ -0.53
SSR1-206ENST00000479365 HAX1O00165 279 aa11.73□□□□□ -0.53
SSR1-206ENST00000479365 RIMS1Q86UR5 1692 aaKnown RBP11.73□□□□□ -0.53
SSR1-206ENST00000479365 TRAPPC8Q9Y2L5 1435 aa11.73□□□□□ -0.53
SSR1-206ENST00000479365 CDC42BPAQ5VT25 1732 aa11.72□□□□□ -0.53
SSR1-206ENST00000479365 C9orf84Q5VXU9 1444 aa11.72□□□□□ -0.53
SSR1-206ENST00000479365 PAK3O75914 559 aaPredicted RBP11.72□□□□□ -0.53
SSR1-206ENST00000479365 ECM2O94769 699 aaPredicted RBP11.72□□□□□ -0.53
SSR1-206ENST00000479365 ZRANB1Q9UGI0 708 aa11.72□□□□□ -0.53
SSR1-206ENST00000479365 GPATCH8Q9UKJ3 1502 aaKnown RBP11.71□□□□□ -0.53
SSR1-206ENST00000479365 MLECQ14165 292 aa11.71□□□□□ -0.53
SSR1-206ENST00000479365 DIP2CQ9Y2E4 1556 aa11.71□□□□□ -0.54
SSR1-206ENST00000479365 ITSN2Q9NZM3 1697 aa11.7□□□□□ -0.54
SSR1-206ENST00000479365 ABCA6Q8N139 1617 aa11.7□□□□□ -0.54
SSR1-206ENST00000479365 SAMD9LQ8IVG5 1584 aa11.7□□□□□ -0.54
SSR1-206ENST00000479365 MLH3Q9UHC1 1453 aa11.7□□□□□ -0.54
SSR1-206ENST00000479365 LOC105371045A0A1W2PR82 267 aa11.69□□□□□ -0.54
SSR1-206ENST00000479365 PYGBP11216 843 aa11.69□□□□□ -0.54
SSR1-206ENST00000479365 EVX2Q03828 476 aa11.69□□□□□ -0.54
SSR1-206ENST00000479365 CCDC61Q9Y6R9 512 aa11.69□□□□□ -0.54
SSR1-206ENST00000479365 LMTK3Q96Q04 1460 aa11.69□□□□□ -0.54
SSR1-206ENST00000479365 SYCP2Q9BX26 1530 aa11.67□□□□□ -0.54
SSR1-206ENST00000479365 ZNF777Q9ULD5 760 aaPredicted RBP11.67□□□□□ -0.54
SSR1-206ENST00000479365 REREQ9P2R6 1566 aa11.67□□□□□ -0.54
SSR1-206ENST00000479365 MTUS2Q5JR59 1369 aa11.67□□□□□ -0.54
SSR1-206ENST00000479365 FER1L4A9Z1Z3 1794 aa11.66□□□□□ -0.54
SSR1-206ENST00000479365 KIDINS220Q9ULH0 1771 aa11.66□□□□□ -0.54
SSR1-206ENST00000479365 CCNB3Q8WWL7 1395 aa11.66□□□□□ -0.54
SSR1-206ENST00000479365 HNRNPMP52272 730 aaKnown RBP eCLIP11.65□□□□□ -0.54
SSR1-206ENST00000479365 PHF12Q96QT6 1004 aa11.65□□□□□ -0.54
SSR1-206ENST00000479365 MYT1LQ9UL68 1186 aa11.65□□□□□ -0.54
SSR1-206ENST00000479365 TIAM1Q13009 1591 aa11.65□□□□□ -0.54
SSR1-206ENST00000479365 EHBP1L1Q8N3D4 1523 aa11.65□□□□□ -0.55
SSR1-206ENST00000479365 CFDP1Q9UEE9 299 aaPredicted RBP11.64□□□□□ -0.55
SSR1-206ENST00000479365 ZNF644Q9H582 1327 aaPredicted RBP11.63□□□□□ -0.55
SSR1-206ENST00000479365 KIAA1107Q9UPP5 1409 aa11.63□□□□□ -0.55
SSR1-206ENST00000479365 CEBPAP49715 358 aaPredicted RBP11.63□□□□□ -0.55
SSR1-206ENST00000479365 AGLP35573 1532 aa11.63□□□□□ -0.55
SSR1-206ENST00000479365 RGL2O15211 777 aa11.62□□□□□ -0.55
SSR1-206ENST00000479365 HSPA2P54652 639 aa11.62□□□□□ -0.55
SSR1-206ENST00000479365 ILDR1Q86SU0 546 aaPredicted RBP11.62□□□□□ -0.55
SSR1-206ENST00000479365 KDM2AQ9Y2K7 1162 aa11.61□□□□□ -0.55
SSR1-206ENST00000479365 PLEKHH2Q8IVE3 1493 aa11.61□□□□□ -0.55
SSR1-206ENST00000479365 SPAG9O60271 1321 aaKnown RBP11.6□□□□□ -0.55
SSR1-206ENST00000479365 VPS8Q8N3P4 1428 aa11.6□□□□□ -0.55
SSR1-206ENST00000479365 INO80Q9ULG1 1556 aaPredicted RBP11.6□□□□□ -0.55
SSR1-206ENST00000479365 NCOA2Q15596 1464 aa11.6□□□□□ -0.55
SSR1-206ENST00000479365 MBD5Q9P267 1494 aa11.6□□□□□ -0.55
SSR1-206ENST00000479365 ZNF579Q8NAF0 562 aaKnown RBP11.6□□□□□ -0.55
SSR1-206ENST00000479365 ATP7AQ04656 1500 aa11.6□□□□□ -0.55
SSR1-206ENST00000479365 CHRM1P11229 460 aaPredicted RBP11.59□□□□□ -0.55
SSR1-206ENST00000479365 RNF25Q96BH1 459 aaPredicted RBP11.59□□□□□ -0.55
SSR1-206ENST00000479365 PLXNC1O60486 1568 aa11.58□□□□□ -0.56
SSR1-206ENST00000479365 TPRNQ4KMQ1 711 aa11.57□□□□□ -0.56
SSR1-206ENST00000479365 KIF12Q96FN5 646 aa11.57□□□□□ -0.56
SSR1-206ENST00000479365 MAP3K13O43283 966 aa11.56□□□□□ -0.56
SSR1-206ENST00000479365 SUPT6HQ7KZ85 1726 aaKnown RBP11.56□□□□□ -0.56
SSR1-206ENST00000479365 BBXQ8WY36 941 aaPredicted RBP11.56□□□□□ -0.56
SSR1-206ENST00000479365 A2MP01023 1474 aa11.56□□□□□ -0.56
SSR1-206ENST00000479365 LRRC9Q6ZRR7 1453 aa11.56□□□□□ -0.56
SSR1-206ENST00000479365 C3P01024 1663 aa11.55□□□□□ -0.56
SSR1-206ENST00000479365 KANK4Q5T7N3 995 aaPredicted RBP11.55□□□□□ -0.56
SSR1-206ENST00000479365 CAMSAP2Q08AD1 1489 aa11.55□□□□□ -0.56
SSR1-206ENST00000479365 PREX1Q8TCU6 1659 aa11.55□□□□□ -0.56
SSR1-206ENST00000479365 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.54□□□□□ -0.56
SSR1-206ENST00000479365 PCDHB13Q9Y5F0 798 aa11.53□□□□□ -0.56
SSR1-206ENST00000479365 RTEL1-TNFRSF6BF6WH68 1400 aa11.52□□□□□ -0.56
SSR1-206ENST00000479365 CNTLNQ9NXG0 1405 aa11.52□□□□□ -0.56
SSR1-206ENST00000479365 CCDC141Q6ZP82 1450 aa11.52□□□□□ -0.56
SSR1-206ENST00000479365 MAP3K1Q13233 1512 aa11.52□□□□□ -0.57
SSR1-206ENST00000479365 PCDHB8Q9UN66 801 aa11.52□□□□□ -0.57
SSR1-206ENST00000479365 UHRF1BP1Q6BDS2 1440 aa11.52□□□□□ -0.57
SSR1-206ENST00000479365 RIOK3O14730 519 aaKnown RBP11.51□□□□□ -0.57
SSR1-206ENST00000479365 ESF1Q9H501 851 aaKnown RBP11.51□□□□□ -0.57
SSR1-206ENST00000479365 ADGBQ8N7X0 1667 aa11.51□□□□□ -0.57
SSR1-206ENST00000479365 IFNL1Q8IU54 200 aa11.5□□□□□ -0.57
SSR1-206ENST00000479365 MS4A3Q96HJ5 214 aa11.5□□□□□ -0.57
SSR1-206ENST00000479365 ZMYM3Q14202 1370 aa11.5□□□□□ -0.57
SSR1-206ENST00000479365 MROH2AA6NES4 1674 aa11.49□□□□□ -0.57
SSR1-206ENST00000479365 CLTCQ00610 1675 aaKnown RBP11.49□□□□□ -0.57
SSR1-206ENST00000479365 GGT6Q6P531 493 aa11.49□□□□□ -0.57
SSR1-206ENST00000479365 DHX29Q7Z478 1369 aaKnown RBP11.49□□□□□ -0.57
SSR1-206ENST00000479365 ARHGEF5Q12774 1597 aa11.49□□□□□ -0.57
SSR1-206ENST00000479365 STRCQ7RTU9 1775 aa11.49□□□□□ -0.57
SSR1-206ENST00000479365 PAXIP1Q6ZW49 1069 aaPredicted RBP11.48□□□□□ -0.57
SSR1-206ENST00000479365 NPATQ14207 1427 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms