RNA–Protein interactions for RNA: ENST00000478188.5

POLR2B-208, Transcript of RNA polymerase II subunit B, humanhuman

TSL 2

Gene POLR2B, Length 3,093 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2B-208ENST00000478188 RAPGEF3O95398 923 aa6.89□□□□□ -1.31
POLR2B-208ENST00000478188 ARHGEF5Q12774 1597 aa6.89□□□□□ -1.31
POLR2B-208ENST00000478188 AGLP35573 1532 aa6.89□□□□□ -1.31
POLR2B-208ENST00000478188 RIMS1Q86UR5 1692 aaKnown RBP6.89□□□□□ -1.31
POLR2B-208ENST00000478188 KIAA1107Q9UPP5 1409 aa6.88□□□□□ -1.31
POLR2B-208ENST00000478188 MAST1Q9Y2H9 1570 aa6.88□□□□□ -1.31
POLR2B-208ENST00000478188 CLEC11AQ9Y240 323 aa6.87□□□□□ -1.31
POLR2B-208ENST00000478188 SSUH2Q9Y2M2 353 aa6.87□□□□□ -1.31
POLR2B-208ENST00000478188 ATP7AQ04656 1500 aa6.87□□□□□ -1.31
POLR2B-208ENST00000478188 C9orf84Q5VXU9 1444 aa6.87□□□□□ -1.31
POLR2B-208ENST00000478188 CDK11AQ9UQ88 783 aaPredicted RBP6.87□□□□□ -1.31
POLR2B-208ENST00000478188 MROH2AA6NES4 1674 aa6.86□□□□□ -1.31
POLR2B-208ENST00000478188 ATP10AO60312 1499 aa6.86□□□□□ -1.31
POLR2B-208ENST00000478188 CAMSAP2Q08AD1 1489 aa6.86□□□□□ -1.31
POLR2B-208ENST00000478188 HAX1O00165 279 aa6.86□□□□□ -1.31
POLR2B-208ENST00000478188 PLEKHH2Q8IVE3 1493 aa6.86□□□□□ -1.31
POLR2B-208ENST00000478188 SP7Q8TDD2 431 aaPredicted RBP6.85□□□□□ -1.31
POLR2B-208ENST00000478188 PTPRMP28827 1452 aa6.85□□□□□ -1.31
POLR2B-208ENST00000478188 C3P01024 1663 aa6.85□□□□□ -1.31
POLR2B-208ENST00000478188 EFCAB2Q5VUJ9 269 aa6.85□□□□□ -1.31
POLR2B-208ENST00000478188 TCOF1Q13428 1488 aaKnown RBP6.84□□□□□ -1.31
POLR2B-208ENST00000478188 MTUS2Q5JR59 1369 aa6.84□□□□□ -1.31
POLR2B-208ENST00000478188 MROH1Q8NDA8 1641 aa6.84□□□□□ -1.32
POLR2B-208ENST00000478188 RNF17Q9BXT8 1623 aaKnown RBP6.84□□□□□ -1.32
POLR2B-208ENST00000478188 CERKQ8TCT0 537 aa6.83□□□□□ -1.32
POLR2B-208ENST00000478188 DNMT1P26358 1616 aaKnown RBP6.83□□□□□ -1.32
POLR2B-208ENST00000478188 PTPN23Q9H3S7 1636 aa6.83□□□□□ -1.32
POLR2B-208ENST00000478188 KANK4Q5T7N3 995 aaPredicted RBP6.82□□□□□ -1.32
POLR2B-208ENST00000478188 ATP1B4Q9UN42 357 aaPredicted RBP6.82□□□□□ -1.32
POLR2B-208ENST00000478188 CCNB3Q8WWL7 1395 aa6.82□□□□□ -1.32
POLR2B-208ENST00000478188 RTEL1-TNFRSF6BF6WH68 1400 aa6.82□□□□□ -1.32
POLR2B-208ENST00000478188 EIF2AK4Q9P2K8 1649 aaKnown RBP6.82□□□□□ -1.32
POLR2B-208ENST00000478188 MYOM3Q5VTT5 1437 aa6.82□□□□□ -1.32
POLR2B-208ENST00000478188 PREX1Q8TCU6 1659 aa6.82□□□□□ -1.32
POLR2B-208ENST00000478188 CCDC141Q6ZP82 1450 aa6.82□□□□□ -1.32
POLR2B-208ENST00000478188 MIA2Q96PC5 1412 aa6.82□□□□□ -1.32
POLR2B-208ENST00000478188 AFAP1Q8N556 730 aa6.81□□□□□ -1.32
POLR2B-208ENST00000478188 DEPDC5O75140 1603 aa6.81□□□□□ -1.32
POLR2B-208ENST00000478188 CLTCQ00610 1675 aaKnown RBP6.81□□□□□ -1.32
POLR2B-208ENST00000478188 ZNF644Q9H582 1327 aaPredicted RBP6.81□□□□□ -1.32
POLR2B-208ENST00000478188 SHANK2Q9UPX8 1470 aa6.81□□□□□ -1.32
POLR2B-208ENST00000478188 ZNF142P52746 1687 aaPredicted RBP6.8□□□□□ -1.32
POLR2B-208ENST00000478188 PRKAR2AP13861 404 aaKnown RBP6.8□□□□□ -1.32
POLR2B-208ENST00000478188 FAM135AQ9P2D6 1515 aa6.8□□□□□ -1.32
POLR2B-208ENST00000478188 A2MP01023 1474 aa6.79□□□□□ -1.32
POLR2B-208ENST00000478188 PTPRTO14522 1441 aa6.79□□□□□ -1.32
POLR2B-208ENST00000478188 MED1Q15648 1581 aaPredicted RBP6.79□□□□□ -1.32
POLR2B-208ENST00000478188 ZC3H13Q5T200 1668 aaKnown RBP6.79□□□□□ -1.32
POLR2B-208ENST00000478188 LTBP4Q8N2S1 1624 aa6.78□□□□□ -1.32
POLR2B-208ENST00000478188 STRCQ7RTU9 1775 aa6.78□□□□□ -1.32
POLR2B-208ENST00000478188 FGD6Q6ZV73 1430 aa6.78□□□□□ -1.32
POLR2B-208ENST00000478188 MYO3AQ8NEV4 1616 aa6.77□□□□□ -1.33
POLR2B-208ENST00000478188 PRR29P0C7W0 189 aa6.77□□□□□ -1.33
POLR2B-208ENST00000478188 HNRNPMP52272 730 aaKnown RBP eCLIP6.77□□□□□ -1.337e-8■■■■■ 30.6
POLR2B-208ENST00000478188 CFDP1Q9UEE9 299 aaPredicted RBP6.77□□□□□ -1.33
POLR2B-208ENST00000478188 KDM5DQ9BY66 1539 aa6.77□□□□□ -1.33
POLR2B-208ENST00000478188 VWDEQ8N2E2 1590 aa6.77□□□□□ -1.33
POLR2B-208ENST00000478188 ABCC5O15440 1437 aa6.77□□□□□ -1.33
POLR2B-208ENST00000478188 ADGRL2O95490 1459 aa6.77□□□□□ -1.33
POLR2B-208ENST00000478188 PRDM15P57071 1507 aaPredicted RBP6.77□□□□□ -1.33
POLR2B-208ENST00000478188 CEP152O94986 1710 aa6.76□□□□□ -1.33
POLR2B-208ENST00000478188 DAPK1P53355 1430 aa6.76□□□□□ -1.33
POLR2B-208ENST00000478188 CAMSAP1Q5T5Y3 1602 aa6.75□□□□□ -1.33
POLR2B-208ENST00000478188 SPAG9O60271 1321 aaKnown RBP6.75□□□□□ -1.33
POLR2B-208ENST00000478188 DUOX2Q9NRD8 1548 aa6.75□□□□□ -1.33
POLR2B-208ENST00000478188 DHX29Q7Z478 1369 aaKnown RBP6.74□□□□□ -1.33
POLR2B-208ENST00000478188 ABCC3O15438 1527 aa6.74□□□□□ -1.33
POLR2B-208ENST00000478188 CNTLNQ9NXG0 1405 aa6.74□□□□□ -1.33
POLR2B-208ENST00000478188 UNC13BO14795 1591 aa6.73□□□□□ -1.33
POLR2B-208ENST00000478188 NPATQ14207 1427 aa6.73□□□□□ -1.33
POLR2B-208ENST00000478188 PTPRKQ15262 1439 aa6.73□□□□□ -1.33
POLR2B-208ENST00000478188 SETD1BQ9UPS6 1966 aaKnown RBP6.73□□□□□ -1.33
POLR2B-208ENST00000478188 ZNF777Q9ULD5 760 aaPredicted RBP6.73□□□□□ -1.33
POLR2B-208ENST00000478188 LMTK2Q8IWU2 1503 aa6.72□□□□□ -1.33
POLR2B-208ENST00000478188 ERBINQ96RT1 1412 aa6.72□□□□□ -1.33
POLR2B-208ENST00000478188 PZPP20742 1482 aa6.71□□□□□ -1.33
POLR2B-208ENST00000478188 GCC2Q8IWJ2 1684 aa6.71□□□□□ -1.34
POLR2B-208ENST00000478188 CEP170BQ9Y4F5 1589 aaPredicted RBP6.71□□□□□ -1.34
POLR2B-208ENST00000478188 POLR1AO95602 1720 aaPredicted RBP6.71□□□□□ -1.34
POLR2B-208ENST00000478188 RSPH4AQ5TD94 716 aa6.7□□□□□ -1.34
POLR2B-208ENST00000478188 RRBP1Q9P2E9 1410 aaKnown RBP6.7□□□□□ -1.34
POLR2B-208ENST00000478188 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.7□□□□□ -1.34
POLR2B-208ENST00000478188 NCOA1Q15788 1441 aa6.7□□□□□ -1.34
POLR2B-208ENST00000478188 NEURL4Q96JN8 1562 aa6.7□□□□□ -1.34
POLR2B-208ENST00000478188 ARID4BQ4LE39 1312 aaPredicted RBP6.7□□□□□ -1.34
POLR2B-208ENST00000478188 KDM5AP29375 1690 aaKnown RBP6.69□□□□□ -1.34
POLR2B-208ENST00000478188 CHADLQ6NUI6 762 aa6.69□□□□□ -1.34
POLR2B-208ENST00000478188 IQGAP3Q86VI3 1631 aa6.69□□□□□ -1.34
POLR2B-208ENST00000478188 UBR1Q8IWV7 1749 aa6.69□□□□□ -1.34
POLR2B-208ENST00000478188 EFCAB6Q5THR3 1501 aa6.69□□□□□ -1.34
POLR2B-208ENST00000478188 SYNMO15061 1565 aa6.69□□□□□ -1.34
POLR2B-208ENST00000478188 C19orf67A6NJJ6 358 aa6.68□□□□□ -1.34
POLR2B-208ENST00000478188 ZMYM3Q14202 1370 aa6.68□□□□□ -1.34
POLR2B-208ENST00000478188 TET3O43151 1660 aa6.68□□□□□ -1.34
POLR2B-208ENST00000478188 STAG3Q9UJ98 1225 aa6.68□□□□□ -1.34
POLR2B-208ENST00000478188 PIK3C2BO00750 1634 aa6.68□□□□□ -1.34
POLR2B-208ENST00000478188 KIF15Q9NS87 1388 aa6.67□□□□□ -1.34
POLR2B-208ENST00000478188 ARHGAP31Q2M1Z3 1444 aa6.67□□□□□ -1.34
POLR2B-208ENST00000478188 ERVK-7P63135 1459 aa6.67□□□□□ -1.34
POLR2B-208ENST00000478188 E9PCH4 1651 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms