RNA–Protein interactions for RNA: ENST00000477949.1

USP33-208, Transcript of ubiquitin specific peptidase 33, humanhuman

TSL 2

Gene USP33, Length 663 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP33-208ENST00000477949 ERCC6L2Q5T890 1561 aa12.56□□□□□ -0.4
USP33-208ENST00000477949 PTGER2P43116 358 aa12.55□□□□□ -0.4
USP33-208ENST00000477949 KIF13AQ9H1H9 1805 aa12.55□□□□□ -0.4
USP33-208ENST00000477949 SYNJ2O15056 1496 aa12.54□□□□□ -0.4
USP33-208ENST00000477949 SOGA1O94964 1423 aa12.54□□□□□ -0.4
USP33-208ENST00000477949 FOXK1P85037 733 aa12.53□□□□□ -0.4
USP33-208ENST00000477949 GPHNQ9NQX3 736 aaPredicted RBP12.53□□□□□ -0.4
USP33-208ENST00000477949 PBX2P40425 430 aa12.52□□□□□ -0.41
USP33-208ENST00000477949 LSM11P83369 360 aaKnown RBP eCLIP12.52□□□□□ -0.41
USP33-208ENST00000477949 GRIN2BQ13224 1484 aa12.52□□□□□ -0.41
USP33-208ENST00000477949 PLPP6Q8IY26 295 aa12.51□□□□□ -0.41
USP33-208ENST00000477949 CHMP7Q8WUX9 453 aaPredicted RBP12.51□□□□□ -0.41
USP33-208ENST00000477949 PTCD2Q8WV60 388 aaKnown RBP12.51□□□□□ -0.41
USP33-208ENST00000477949 RYDENQ9NUL5 291 aaKnown RBP12.49□□□□□ -0.41
USP33-208ENST00000477949 FGD5Q6ZNL6 1462 aa12.48□□□□□ -0.41
USP33-208ENST00000477949 KDM4FA0A1W2PPD8 638 aa12.48□□□□□ -0.41
USP33-208ENST00000477949 PSDA5PKW4 1024 aaPredicted RBP12.48□□□□□ -0.41
USP33-208ENST00000477949 NKX1-1Q15270 411 aaPredicted RBP12.47□□□□□ -0.41
USP33-208ENST00000477949 TBC1D12O60347 775 aa12.45□□□□□ -0.42
USP33-208ENST00000477949 DSG2Q14126 1118 aa12.45□□□□□ -0.42
USP33-208ENST00000477949 POTEEQ6S8J3 1075 aa12.45□□□□□ -0.42
USP33-208ENST00000477949 AXIN2Q9Y2T1 843 aa12.45□□□□□ -0.42
USP33-208ENST00000477949 PBRM1Q86U86 1689 aa12.45□□□□□ -0.42
USP33-208ENST00000477949 FBXO41Q8TF61 875 aa12.44□□□□□ -0.42
USP33-208ENST00000477949 CEP170Q5SW79 1584 aa12.43□□□□□ -0.42
USP33-208ENST00000477949 SHROOM2Q13796 1616 aa12.42□□□□□ -0.42
USP33-208ENST00000477949 CUX1P39880 1505 aa12.42□□□□□ -0.42
USP33-208ENST00000477949 ARHGAP33O14559 1287 aa12.41□□□□□ -0.42
USP33-208ENST00000477949 ILDR2Q71H61 639 aa12.41□□□□□ -0.42
USP33-208ENST00000477949 ABCA5Q8WWZ7 1642 aa12.4□□□□□ -0.42
USP33-208ENST00000477949 NUP160Q12769 1436 aa12.39□□□□□ -0.43
USP33-208ENST00000477949 GRIN2AQ12879 1464 aa12.38□□□□□ -0.43
USP33-208ENST00000477949 ABCC10Q5T3U5 1492 aa12.38□□□□□ -0.43
USP33-208ENST00000477949 DIP2BQ9P265 1576 aa12.35□□□□□ -0.43
USP33-208ENST00000477949 CRISPLD2Q9H0B8 497 aa12.35□□□□□ -0.43
USP33-208ENST00000477949 PPP4R3BQ5MIZ7 849 aa12.34□□□□□ -0.43
USP33-208ENST00000477949 OXER1Q8TDS5 423 aa12.34□□□□□ -0.43
USP33-208ENST00000477949 KDM6BO15054 1643 aa12.33□□□□□ -0.43
USP33-208ENST00000477949 MAPKBP1O60336 1514 aa12.33□□□□□ -0.44
USP33-208ENST00000477949 ABCA10Q8WWZ4 1543 aa12.33□□□□□ -0.44
USP33-208ENST00000477949 PDE4AP27815 886 aa12.33□□□□□ -0.44
USP33-208ENST00000477949 ADGRD1Q6QNK2 874 aa12.33□□□□□ -0.44
USP33-208ENST00000477949 ADAMTS12P58397 1594 aa12.33□□□□□ -0.44
USP33-208ENST00000477949 TK2O00142 265 aa12.31□□□□□ -0.44
USP33-208ENST00000477949 GTPBP6O43824 516 aaPredicted RBP12.31□□□□□ -0.44
USP33-208ENST00000477949 PPP1R15BQ5SWA1 713 aa12.3□□□□□ -0.44
USP33-208ENST00000477949 PSEN2P49810 448 aa12.29□□□□□ -0.44
USP33-208ENST00000477949 FAM69CQ0P6D2 419 aa12.29□□□□□ -0.44
USP33-208ENST00000477949 UPF1Q92900 1129 aaKnown RBP eCLIP12.29□□□□□ -0.44
USP33-208ENST00000477949 DMRTA1Q5VZB9 504 aa12.28□□□□□ -0.44
USP33-208ENST00000477949 HECW2Q9P2P5 1572 aa12.27□□□□□ -0.44
USP33-208ENST00000477949 NCKAP5LQ9HCH0 1330 aa12.27□□□□□ -0.45
USP33-208ENST00000477949 KCNH8Q96L42 1107 aa12.25□□□□□ -0.45
USP33-208ENST00000477949 HCSTQ9UBK5 93 aa12.25□□□□□ -0.45
USP33-208ENST00000477949 ADCY10Q96PN6 1610 aa12.25□□□□□ -0.45
USP33-208ENST00000477949 HRO43593 1189 aa12.24□□□□□ -0.45
USP33-208ENST00000477949 ADGRL1O94910 1474 aa12.24□□□□□ -0.45
USP33-208ENST00000477949 PRG4Q92954 1404 aaPredicted RBP12.24□□□□□ -0.45
USP33-208ENST00000477949 LARP6Q9BRS8 491 aaKnown RBP12.23□□□□□ -0.45
USP33-208ENST00000477949 FHAD1B1AJZ9 1412 aa12.21□□□□□ -0.45
USP33-208ENST00000477949 ZNF454Q8N9F8 522 aa12.21□□□□□ -0.45
USP33-208ENST00000477949 STAC3Q96MF2 364 aa12.21□□□□□ -0.45
USP33-208ENST00000477949 KCNK17Q96T54 332 aa12.21□□□□□ -0.45
USP33-208ENST00000477949 ANO8Q9HCE9 1232 aaPredicted RBP12.21□□□□□ -0.45
USP33-208ENST00000477949 TSPOAP1O95153 1857 aa12.21□□□□□ -0.46
USP33-208ENST00000477949 DDX27Q96GQ7 796 aaKnown RBP12.19□□□□□ -0.46
USP33-208ENST00000477949 PPRC1Q5VV67 1664 aaKnown RBP12.19□□□□□ -0.46
USP33-208ENST00000477949 FOSBP53539 338 aa12.18□□□□□ -0.46
USP33-208ENST00000477949 BCL2L12Q9HB09 334 aa12.18□□□□□ -0.46
USP33-208ENST00000477949 RUSC2Q8N2Y8 1516 aa12.17□□□□□ -0.46
USP33-208ENST00000477949 EVI5O60447 810 aa12.16□□□□□ -0.46
USP33-208ENST00000477949 MFSD10Q14728 455 aa12.16□□□□□ -0.46
USP33-208ENST00000477949 JPH4Q96JJ6 628 aa12.15□□□□□ -0.46
USP33-208ENST00000477949 VPS9D1Q9Y2B5 631 aa12.15□□□□□ -0.46
USP33-208ENST00000477949 ERICH3Q5RHP9 1530 aa12.15□□□□□ -0.46
USP33-208ENST00000477949 MAP3K9P80192 1104 aa12.14□□□□□ -0.47
USP33-208ENST00000477949 SLC4A5Q9BY07 1137 aa12.14□□□□□ -0.47
USP33-208ENST00000477949 DISP3Q9P2K9 1392 aa12.14□□□□□ -0.47
USP33-208ENST00000477949 COL17A1Q9UMD9 1497 aaPredicted RBP12.14□□□□□ -0.47
USP33-208ENST00000477949 PTPREP23469 700 aa12.13□□□□□ -0.47
USP33-208ENST00000477949 PLA2G2EQ9NZK7 142 aa12.13□□□□□ -0.47
USP33-208ENST00000477949 KCTD12Q96CX2 325 aaKnown RBP12.12□□□□□ -0.47
USP33-208ENST00000477949 WRNQ14191 1432 aaPredicted RBP eCLIP12.11□□□□□ -0.47
USP33-208ENST00000477949 ZDHHC16Q969W1 377 aa12.1□□□□□ -0.47
USP33-208ENST00000477949 GLI2P10070 1586 aa12.09□□□□□ -0.47
USP33-208ENST00000477949 EMILIN3Q9NT22 766 aa12.08□□□□□ -0.48
USP33-208ENST00000477949 BIVM-ERCC5R4GMW8 1640 aa12.08□□□□□ -0.48
USP33-208ENST00000477949 CADPS2Q86UW7 1296 aa12.06□□□□□ -0.48
USP33-208ENST00000477949 ADAM33Q9BZ11 813 aa12.06□□□□□ -0.48
USP33-208ENST00000477949 TOP2BQ02880 1626 aa12.05□□□□□ -0.48
USP33-208ENST00000477949 BHMG1C9JSJ3 638 aaPredicted RBP12.05□□□□□ -0.48
USP33-208ENST00000477949 ZBED2Q9BTP6 218 aa12.05□□□□□ -0.48
USP33-208ENST00000477949 MAP3K4Q9Y6R4 1608 aa12.02□□□□□ -0.49
USP33-208ENST00000477949 ASXL2Q76L83 1435 aa12.02□□□□□ -0.49
USP33-208ENST00000477949 ABCC2Q92887 1545 aa12.01□□□□□ -0.49
USP33-208ENST00000477949 KIAA0586Q9BVV6 1533 aa12.01□□□□□ -0.49
USP33-208ENST00000477949 GOLGA8CPA6NN73 597 aa12□□□□□ -0.49
USP33-208ENST00000477949 PTPN5P54829 565 aa12□□□□□ -0.49
USP33-208ENST00000477949 MRPL50Q8N5N7 158 aaKnown RBP12□□□□□ -0.49
USP33-208ENST00000477949 PCDHGA10Q9Y5H3 936 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms