RNA–Protein interactions for RNA: ENST00000477561.5

HDAC6-221, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-221ENST00000477561 MROH2AA6NES4 1674 aa12.77□□□□□ -0.37
HDAC6-221ENST00000477561 KIF15Q9NS87 1388 aa12.76□□□□□ -0.37
HDAC6-221ENST00000477561 DNMT1P26358 1616 aaKnown RBP12.75□□□□□ -0.37
HDAC6-221ENST00000477561 PTPRKQ15262 1439 aa12.75□□□□□ -0.37
HDAC6-221ENST00000477561 FBXO31Q5XUX0 539 aaPredicted RBP12.75□□□□□ -0.37
HDAC6-221ENST00000477561 CROCC2H7BZ55 1655 aa12.74□□□□□ -0.37
HDAC6-221ENST00000477561 SHANK2Q9UPX8 1470 aa12.74□□□□□ -0.37
HDAC6-221ENST00000477561 SETD1BQ9UPS6 1966 aaKnown RBP12.74□□□□□ -0.37
HDAC6-221ENST00000477561 DUOX2Q9NRD8 1548 aa12.73□□□□□ -0.37
HDAC6-221ENST00000477561 NPATQ14207 1427 aa12.73□□□□□ -0.37
HDAC6-221ENST00000477561 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.73□□□□□ -0.372e-7■■□□□ 13.8
HDAC6-221ENST00000477561 KDM5DQ9BY66 1539 aa12.72□□□□□ -0.37
HDAC6-221ENST00000477561 ANKRD30AQ9BXX3 1397 aa12.72□□□□□ -0.37
HDAC6-221ENST00000477561 ITGAEP38570 1179 aa12.71□□□□□ -0.37
HDAC6-221ENST00000477561 NCOA1Q15788 1441 aa12.7□□□□□ -0.38
HDAC6-221ENST00000477561 RNF17Q9BXT8 1623 aaKnown RBP12.7□□□□□ -0.38
HDAC6-221ENST00000477561 EIF2AK4Q9P2K8 1649 aaKnown RBP12.7□□□□□ -0.38
HDAC6-221ENST00000477561 ERBINQ96RT1 1412 aa12.69□□□□□ -0.38
HDAC6-221ENST00000477561 ABCC3O15438 1527 aa12.68□□□□□ -0.38
HDAC6-221ENST00000477561 PZPP20742 1482 aa12.68□□□□□ -0.38
HDAC6-221ENST00000477561 MROH1Q8NDA8 1641 aa12.68□□□□□ -0.38
HDAC6-221ENST00000477561 TNRQ92752 1358 aa12.68□□□□□ -0.38
HDAC6-221ENST00000477561 NCKAP5LQ9HCH0 1330 aa12.67□□□□□ -0.38
HDAC6-221ENST00000477561 MYO3AQ8NEV4 1616 aa12.67□□□□□ -0.38
HDAC6-221ENST00000477561 STRCQ7RTU9 1775 aa12.67□□□□□ -0.38
HDAC6-221ENST00000477561 ILDR1Q86SU0 546 aaPredicted RBP12.67□□□□□ -0.38
HDAC6-221ENST00000477561 FAM135AQ9P2D6 1515 aa12.67□□□□□ -0.38
HDAC6-221ENST00000477561 CAMSAP1Q5T5Y3 1602 aa12.66□□□□□ -0.38
HDAC6-221ENST00000477561 DMRT2Q9Y5R5 561 aa12.66□□□□□ -0.38
HDAC6-221ENST00000477561 ADGRL2O95490 1459 aa12.65□□□□□ -0.38
HDAC6-221ENST00000477561 CEP152O94986 1710 aa12.65□□□□□ -0.38
HDAC6-221ENST00000477561 CEP170BQ9Y4F5 1589 aaPredicted RBP12.65□□□□□ -0.38
HDAC6-221ENST00000477561 KANK1Q14678 1352 aa12.64□□□□□ -0.39
HDAC6-221ENST00000477561 A2ML1A8K2U0 1454 aa12.64□□□□□ -0.39
HDAC6-221ENST00000477561 ZC3H13Q5T200 1668 aaKnown RBP12.64□□□□□ -0.39
HDAC6-221ENST00000477561 ANKRD50Q9ULJ7 1429 aa12.62□□□□□ -0.39
HDAC6-221ENST00000477561 PRDM15P57071 1507 aaPredicted RBP12.62□□□□□ -0.39
HDAC6-221ENST00000477561 ZNF142P52746 1687 aaPredicted RBP12.62□□□□□ -0.39
HDAC6-221ENST00000477561 ERVK-7P63135 1459 aa12.61□□□□□ -0.39
HDAC6-221ENST00000477561 DEPDC5O75140 1603 aa12.61□□□□□ -0.39
HDAC6-221ENST00000477561 PTPRTO14522 1441 aa12.61□□□□□ -0.39
HDAC6-221ENST00000477561 CFAP65Q6ZU64 1925 aaKnown RBP12.6□□□□□ -0.39
HDAC6-221ENST00000477561 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.6□□□□□ -0.39
HDAC6-221ENST00000477561 PKD2Q13563 968 aa12.6□□□□□ -0.39
HDAC6-221ENST00000477561 SPATA31D1Q6ZQQ2 1576 aa12.6□□□□□ -0.39
HDAC6-221ENST00000477561 ROCK1Q13464 1354 aa12.59□□□□□ -0.39
HDAC6-221ENST00000477561 THEMISQ8N1K5 641 aaPredicted RBP12.59□□□□□ -0.39
HDAC6-221ENST00000477561 CERKQ8TCT0 537 aa12.59□□□□□ -0.39
HDAC6-221ENST00000477561 PLA2R1Q13018 1463 aa12.59□□□□□ -0.39
HDAC6-221ENST00000477561 NLRP1Q9C000 1473 aa12.59□□□□□ -0.39
HDAC6-221ENST00000477561 ARHGAP31Q2M1Z3 1444 aa12.58□□□□□ -0.4
HDAC6-221ENST00000477561 UGGT1Q9NYU2 1555 aa12.58□□□□□ -0.4
HDAC6-221ENST00000477561 RRBP1Q9P2E9 1410 aaKnown RBP12.58□□□□□ -0.4
HDAC6-221ENST00000477561 VWDEQ8N2E2 1590 aa12.57□□□□□ -0.4
HDAC6-221ENST00000477561 FBXO41Q8TF61 875 aa12.57□□□□□ -0.4
HDAC6-221ENST00000477561 ADRA2BP18089 450 aa12.56□□□□□ -0.4
HDAC6-221ENST00000477561 ANKLE2Q86XL3 938 aa12.56□□□□□ -0.4
HDAC6-221ENST00000477561 LMTK2Q8IWU2 1503 aa12.56□□□□□ -0.4
HDAC6-221ENST00000477561 STAG3Q9UJ98 1225 aa12.54□□□□□ -0.4
HDAC6-221ENST00000477561 ZNF335Q9H4Z2 1342 aaPredicted RBP12.54□□□□□ -0.4
HDAC6-221ENST00000477561 EFCAB6Q5THR3 1501 aa12.53□□□□□ -0.4
HDAC6-221ENST00000477561 IDI1Q13907 227 aa12.53□□□□□ -0.4
HDAC6-221ENST00000477561 NUP155O75694 1391 aa12.53□□□□□ -0.4
HDAC6-221ENST00000477561 UNC13BO14795 1591 aa12.52□□□□□ -0.41
HDAC6-221ENST00000477561 NEURL4Q96JN8 1562 aa12.52□□□□□ -0.41
HDAC6-221ENST00000477561 SYNMO15061 1565 aa12.51□□□□□ -0.41
HDAC6-221ENST00000477561 LTBP4Q8N2S1 1624 aa12.51□□□□□ -0.41
HDAC6-221ENST00000477561 POLR1AO95602 1720 aaPredicted RBP12.51□□□□□ -0.41
HDAC6-221ENST00000477561 UBR1Q8IWV7 1749 aa12.51□□□□□ -0.41
HDAC6-221ENST00000477561 LTKP29376 864 aa12.5□□□□□ -0.41
HDAC6-221ENST00000477561 TXNDC2Q86VQ3 553 aa12.5□□□□□ -0.41
HDAC6-221ENST00000477561 NPHP4O75161 1426 aaPredicted RBP12.5□□□□□ -0.41
HDAC6-221ENST00000477561 NOS1P29475 1434 aa12.5□□□□□ -0.41
HDAC6-221ENST00000477561 PIK3C2BO00750 1634 aa12.5□□□□□ -0.41
HDAC6-221ENST00000477561 TET3O43151 1660 aa12.49□□□□□ -0.41
HDAC6-221ENST00000477561 NAIPQ13075 1403 aa12.49□□□□□ -0.41
HDAC6-221ENST00000477561 SLC52A1Q9NWF4 448 aa12.48□□□□□ -0.41
HDAC6-221ENST00000477561 RPRD2Q5VT52 1461 aaKnown RBP12.47□□□□□ -0.41
HDAC6-221ENST00000477561 CHGAP10645 457 aaKnown RBP12.47□□□□□ -0.41
HDAC6-221ENST00000477561 TRIM52Q96A61 297 aa12.47□□□□□ -0.41
HDAC6-221ENST00000477561 EID1Q9Y6B2 187 aa12.47□□□□□ -0.41
HDAC6-221ENST00000477561 IQGAP3Q86VI3 1631 aa12.47□□□□□ -0.41
HDAC6-221ENST00000477561 MED14O60244 1454 aa12.46□□□□□ -0.41
HDAC6-221ENST00000477561 TMEM2Q9UHN6 1383 aa12.46□□□□□ -0.41
HDAC6-221ENST00000477561 E9PCH4 1651 aa12.46□□□□□ -0.41
HDAC6-221ENST00000477561 GCC2Q8IWJ2 1684 aa12.46□□□□□ -0.41
HDAC6-221ENST00000477561 SCAF11Q99590 1463 aaKnown RBP12.46□□□□□ -0.42
HDAC6-221ENST00000477561 ARHGAP23Q9P227 1491 aa12.46□□□□□ -0.42
HDAC6-221ENST00000477561 SLIT1O75093 1534 aa12.45□□□□□ -0.42
HDAC6-221ENST00000477561 IQGAP1P46940 1657 aa12.44□□□□□ -0.42
HDAC6-221ENST00000477561 HFM1A2PYH4 1435 aa12.44□□□□□ -0.42
HDAC6-221ENST00000477561 ADGRB3O60242 1522 aa12.43□□□□□ -0.42
HDAC6-221ENST00000477561 BCANQ96GW7 911 aa12.43□□□□□ -0.42
HDAC6-221ENST00000477561 NUTM2DQ5VT03 806 aaPredicted RBP12.42□□□□□ -0.42
HDAC6-221ENST00000477561 UBAP1LF5GYI3 381 aa12.41□□□□□ -0.42
HDAC6-221ENST00000477561 SLC26A8Q96RN1 970 aa12.41□□□□□ -0.42
HDAC6-221ENST00000477561 PPP1R15AO75807 674 aaPredicted RBP12.4□□□□□ -0.42
HDAC6-221ENST00000477561 SLC4A1APQ9BWU0 796 aaKnown RBP12.4□□□□□ -0.42
HDAC6-221ENST00000477561 KDM5AP29375 1690 aaKnown RBP12.4□□□□□ -0.42
HDAC6-221ENST00000477561 RIMS2Q9UQ26 1411 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms