RNA–Protein interactions for RNA: ENST00000477508.1

TOP3A-205, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 600 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-205ENST00000477508 EIF2AK4Q9P2K8 1649 aaKnown RBP19.89■□□□□ 0.77
TOP3A-205ENST00000477508 CNTLNQ9NXG0 1405 aa19.88■□□□□ 0.77
TOP3A-205ENST00000477508 GGT6Q6P531 493 aa19.88■□□□□ 0.77
TOP3A-205ENST00000477508 FER1L4A9Z1Z3 1794 aa19.87■□□□□ 0.77
TOP3A-205ENST00000477508 FAM135AQ9P2D6 1515 aa19.85■□□□□ 0.77
TOP3A-205ENST00000477508 PTPRMP28827 1452 aa19.85■□□□□ 0.77
TOP3A-205ENST00000477508 RIMS1Q86UR5 1692 aaKnown RBP19.84■□□□□ 0.77
TOP3A-205ENST00000477508 ANKRD50Q9ULJ7 1429 aa19.83■□□□□ 0.76
TOP3A-205ENST00000477508 RNF17Q9BXT8 1623 aaKnown RBP19.82■□□□□ 0.76
TOP3A-205ENST00000477508 WASHC2CQ9Y4E1 1318 aa19.79■□□□□ 0.76
TOP3A-205ENST00000477508 MROH2AA6NES4 1674 aa19.78■□□□□ 0.76
TOP3A-205ENST00000477508 KANK1Q14678 1352 aa19.78■□□□□ 0.76
TOP3A-205ENST00000477508 KDM5DQ9BY66 1539 aa19.77■□□□□ 0.76
TOP3A-205ENST00000477508 ZMYM3Q14202 1370 aa19.76■□□□□ 0.75
TOP3A-205ENST00000477508 DEPDC5O75140 1603 aa19.76■□□□□ 0.75
TOP3A-205ENST00000477508 PRDM15P57071 1507 aaPredicted RBP19.75■□□□□ 0.75
TOP3A-205ENST00000477508 CLTCQ00610 1675 aaKnown RBP19.75■□□□□ 0.75
TOP3A-205ENST00000477508 HFM1A2PYH4 1435 aa19.74■□□□□ 0.75
TOP3A-205ENST00000477508 ZC3H13Q5T200 1668 aaKnown RBP19.74■□□□□ 0.75
TOP3A-205ENST00000477508 MROH1Q8NDA8 1641 aa19.73■□□□□ 0.75
TOP3A-205ENST00000477508 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.73■□□□□ 0.75
TOP3A-205ENST00000477508 NAIPQ13075 1403 aa19.73■□□□□ 0.75
TOP3A-205ENST00000477508 C3P01024 1663 aa19.71■□□□□ 0.75
TOP3A-205ENST00000477508 CEBPAP49715 358 aaPredicted RBP19.71■□□□□ 0.75
TOP3A-205ENST00000477508 SETD1BQ9UPS6 1966 aaKnown RBP19.71■□□□□ 0.75
TOP3A-205ENST00000477508 ABCC3O15438 1527 aa19.71■□□□□ 0.75
TOP3A-205ENST00000477508 GCC2Q8IWJ2 1684 aa19.7■□□□□ 0.74
TOP3A-205ENST00000477508 NPATQ14207 1427 aa19.69■□□□□ 0.74
TOP3A-205ENST00000477508 ACIN1Q9UKV3 1341 aaKnown RBP19.69■□□□□ 0.74
TOP3A-205ENST00000477508 UNC13BO14795 1591 aa19.68■□□□□ 0.74
TOP3A-205ENST00000477508 VWDEQ8N2E2 1590 aa19.67■□□□□ 0.74
TOP3A-205ENST00000477508 PZPP20742 1482 aa19.67■□□□□ 0.74
TOP3A-205ENST00000477508 LMTK2Q8IWU2 1503 aa19.66■□□□□ 0.74
TOP3A-205ENST00000477508 ARHGAP31Q2M1Z3 1444 aa19.66■□□□□ 0.74
TOP3A-205ENST00000477508 CEP152O94986 1710 aa19.65■□□□□ 0.74
TOP3A-205ENST00000477508 NUP155O75694 1391 aa19.64■□□□□ 0.73
TOP3A-205ENST00000477508 CAMSAP1Q5T5Y3 1602 aa19.63■□□□□ 0.73
TOP3A-205ENST00000477508 SETD5Q9C0A6 1442 aa19.61■□□□□ 0.73
TOP3A-205ENST00000477508 IQGAP3Q86VI3 1631 aa19.6■□□□□ 0.73
TOP3A-205ENST00000477508 UHRF1BP1Q6BDS2 1440 aa19.59■□□□□ 0.73
TOP3A-205ENST00000477508 PREX1Q8TCU6 1659 aa19.59■□□□□ 0.73
TOP3A-205ENST00000477508 EFCAB6Q5THR3 1501 aa19.59■□□□□ 0.73
TOP3A-205ENST00000477508 RPRD2Q5VT52 1461 aaKnown RBP19.59■□□□□ 0.73
TOP3A-205ENST00000477508 TET3O43151 1660 aa19.59■□□□□ 0.73
TOP3A-205ENST00000477508 TNRQ92752 1358 aa19.58■□□□□ 0.73
TOP3A-205ENST00000477508 FBXO31Q5XUX0 539 aaPredicted RBP19.58■□□□□ 0.72
TOP3A-205ENST00000477508 ADRA2BP18089 450 aa19.57■□□□□ 0.72
TOP3A-205ENST00000477508 TRIM52Q96A61 297 aa19.57■□□□□ 0.72
TOP3A-205ENST00000477508 ERVK-7P63135 1459 aa19.56■□□□□ 0.72
TOP3A-205ENST00000477508 SPATA31D1Q6ZQQ2 1576 aa19.56■□□□□ 0.72
TOP3A-205ENST00000477508 HRCP23327 699 aa19.55■□□□□ 0.72
TOP3A-205ENST00000477508 TRIM26Q12899 539 aaPredicted RBP19.55■□□□□ 0.72
TOP3A-205ENST00000477508 LMTK3Q96Q04 1460 aa19.54■□□□□ 0.72
TOP3A-205ENST00000477508 CFAP65Q6ZU64 1925 aaKnown RBP19.53■□□□□ 0.72
TOP3A-205ENST00000477508 NLRP1Q9C000 1473 aa19.53■□□□□ 0.72
TOP3A-205ENST00000477508 ILDR1Q86SU0 546 aaPredicted RBP19.52■□□□□ 0.72
TOP3A-205ENST00000477508 RAB3GAP2Q9H2M9 1393 aa19.52■□□□□ 0.72
TOP3A-205ENST00000477508 MYO3AQ8NEV4 1616 aa19.51■□□□□ 0.71
TOP3A-205ENST00000477508 SLC4A1APQ9BWU0 796 aaKnown RBP19.5■□□□□ 0.71
TOP3A-205ENST00000477508 NOS1P29475 1434 aa19.5■□□□□ 0.71
TOP3A-205ENST00000477508 A2ML1A8K2U0 1454 aa19.49■□□□□ 0.71
TOP3A-205ENST00000477508 SLC52A1Q9NWF4 448 aa19.49■□□□□ 0.71
TOP3A-205ENST00000477508 E9PCH4 1651 aa19.48■□□□□ 0.71
TOP3A-205ENST00000477508 ZNF142P52746 1687 aaPredicted RBP19.48■□□□□ 0.71
TOP3A-205ENST00000477508 CEP170BQ9Y4F5 1589 aaPredicted RBP19.48■□□□□ 0.71
TOP3A-205ENST00000477508 PKD2Q13563 968 aa19.45■□□□□ 0.7
TOP3A-205ENST00000477508 THEMISQ8N1K5 641 aaPredicted RBP19.45■□□□□ 0.7
TOP3A-205ENST00000477508 HSPA2P54652 639 aa19.44■□□□□ 0.7
TOP3A-205ENST00000477508 MPHOSPH9Q99550 1183 aa19.44■□□□□ 0.7
TOP3A-205ENST00000477508 SYNMO15061 1565 aa19.42■□□□□ 0.7
TOP3A-205ENST00000477508 UGGT1Q9NYU2 1555 aa19.42■□□□□ 0.7
TOP3A-205ENST00000477508 IDI1Q13907 227 aa19.42■□□□□ 0.7
TOP3A-205ENST00000477508 PTPRTO14522 1441 aa19.42■□□□□ 0.7
TOP3A-205ENST00000477508 STAG3Q9UJ98 1225 aa19.4■□□□□ 0.7
TOP3A-205ENST00000477508 PLA2R1Q13018 1463 aa19.4■□□□□ 0.7
TOP3A-205ENST00000477508 KDM5AP29375 1690 aaKnown RBP19.39■□□□□ 0.69
TOP3A-205ENST00000477508 SPHKAPQ2M3C7 1700 aa19.39■□□□□ 0.69
TOP3A-205ENST00000477508 DMRT2Q9Y5R5 561 aa19.37■□□□□ 0.69
TOP3A-205ENST00000477508 PIK3C2BO00750 1634 aa19.36■□□□□ 0.69
TOP3A-205ENST00000477508 UBR1Q8IWV7 1749 aa19.36■□□□□ 0.69
TOP3A-205ENST00000477508 TRPM2O94759 1503 aa19.35■□□□□ 0.69
TOP3A-205ENST00000477508 ANKLE2Q86XL3 938 aa19.34■□□□□ 0.69
TOP3A-205ENST00000477508 ADGRB3O60242 1522 aa19.34■□□□□ 0.69
TOP3A-205ENST00000477508 HDGFP51858 240 aaKnown RBP19.31■□□□□ 0.68
TOP3A-205ENST00000477508 EID1Q9Y6B2 187 aa19.31■□□□□ 0.68
TOP3A-205ENST00000477508 STRCQ7RTU9 1775 aa19.31■□□□□ 0.68
TOP3A-205ENST00000477508 SLIT1O75093 1534 aa19.3■□□□□ 0.68
TOP3A-205ENST00000477508 CHGAP10645 457 aaKnown RBP19.3■□□□□ 0.68
TOP3A-205ENST00000477508 TMEM2Q9UHN6 1383 aa19.3■□□□□ 0.68
TOP3A-205ENST00000477508 TMEM131LA2VDJ0 1609 aa19.29■□□□□ 0.68
TOP3A-205ENST00000477508 ARHGAP23Q9P227 1491 aa19.29■□□□□ 0.68
TOP3A-205ENST00000477508 NCKAP5LQ9HCH0 1330 aa19.28■□□□□ 0.68
TOP3A-205ENST00000477508 CCDC144AA2RUR9 1427 aa19.28■□□□□ 0.68
TOP3A-205ENST00000477508 CLTCL1P53675 1640 aa19.27■□□□□ 0.68
TOP3A-205ENST00000477508 TXNDC2Q86VQ3 553 aa19.27■□□□□ 0.68
TOP3A-205ENST00000477508 POLR1AO95602 1720 aaPredicted RBP19.26■□□□□ 0.67
TOP3A-205ENST00000477508 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.26■□□□□ 0.67
TOP3A-205ENST00000477508 KIF1BO60333 1816 aa19.25■□□□□ 0.67
TOP3A-205ENST00000477508 MED14O60244 1454 aa19.25■□□□□ 0.67
TOP3A-205ENST00000477508 SCAF11Q99590 1463 aaKnown RBP19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms