RNA–Protein interactions for RNA: ENST00000476931.1

RPN1-202, Transcript of ribophorin I, humanhuman

TSL 4

Gene RPN1, Length 526 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPN1-202ENST00000476931 ACIN1Q9UKV3 1341 aaKnown RBP25.4■■□□□ 1.66
RPN1-202ENST00000476931 FAM135AQ9P2D6 1515 aa25.4■■□□□ 1.66
RPN1-202ENST00000476931 KANK1Q14678 1352 aa25.4■■□□□ 1.66
RPN1-202ENST00000476931 HFM1A2PYH4 1435 aa25.38■■□□□ 1.65
RPN1-202ENST00000476931 PTPRMP28827 1452 aa25.38■■□□□ 1.65
RPN1-202ENST00000476931 MADDQ8WXG6 1647 aa25.37■■□□□ 1.65
RPN1-202ENST00000476931 NAIPQ13075 1403 aa25.37■■□□□ 1.65
RPN1-202ENST00000476931 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.36■■□□□ 1.65
RPN1-202ENST00000476931 ZMYM3Q14202 1370 aa25.35■■□□□ 1.65
RPN1-202ENST00000476931 RNF17Q9BXT8 1623 aaKnown RBP25.35■■□□□ 1.65
RPN1-202ENST00000476931 FER1L4A9Z1Z3 1794 aa25.32■■□□□ 1.64
RPN1-202ENST00000476931 KDM5DQ9BY66 1539 aa25.31■■□□□ 1.64
RPN1-202ENST00000476931 TRIM26Q12899 539 aaPredicted RBP25.3■■□□□ 1.64
RPN1-202ENST00000476931 CEBPAP49715 358 aaPredicted RBP25.28■■□□□ 1.64
RPN1-202ENST00000476931 RIMS1Q86UR5 1692 aaKnown RBP25.28■■□□□ 1.64
RPN1-202ENST00000476931 PRDM15P57071 1507 aaPredicted RBP25.27■■□□□ 1.64
RPN1-202ENST00000476931 DEPDC5O75140 1603 aa25.26■■□□□ 1.63
RPN1-202ENST00000476931 HRCP23327 699 aa25.26■■□□□ 1.63
RPN1-202ENST00000476931 NUP155O75694 1391 aa25.25■■□□□ 1.63
RPN1-202ENST00000476931 SETD5Q9C0A6 1442 aa25.25■■□□□ 1.63
RPN1-202ENST00000476931 MROH1Q8NDA8 1641 aa25.25■■□□□ 1.63
RPN1-202ENST00000476931 MROH2AA6NES4 1674 aa25.25■■□□□ 1.63
RPN1-202ENST00000476931 ABCC3O15438 1527 aa25.24■■□□□ 1.63
RPN1-202ENST00000476931 PLPPR3Q6T4P5 718 aa25.23■■□□□ 1.63
RPN1-202ENST00000476931 LMTK2Q8IWU2 1503 aa25.22■■□□□ 1.63
RPN1-202ENST00000476931 NPATQ14207 1427 aa25.22■■□□□ 1.63
RPN1-202ENST00000476931 ARHGAP31Q2M1Z3 1444 aa25.22■■□□□ 1.63
RPN1-202ENST00000476931 CLTCQ00610 1675 aaKnown RBP25.22■■□□□ 1.63
RPN1-202ENST00000476931 ZC3H13Q5T200 1668 aaKnown RBP25.22■■□□□ 1.63
RPN1-202ENST00000476931 VWDEQ8N2E2 1590 aa25.22■■□□□ 1.63
RPN1-202ENST00000476931 GCC2Q8IWJ2 1684 aa25.21■■□□□ 1.63
RPN1-202ENST00000476931 TRIM52Q96A61 297 aa25.21■■□□□ 1.63
RPN1-202ENST00000476931 UNC13BO14795 1591 aa25.19■■□□□ 1.62
RPN1-202ENST00000476931 PZPP20742 1482 aa25.19■■□□□ 1.62
RPN1-202ENST00000476931 SETD1BQ9UPS6 1966 aaKnown RBP25.18■■□□□ 1.62
RPN1-202ENST00000476931 C3P01024 1663 aa25.16■■□□□ 1.62
RPN1-202ENST00000476931 FBXO31Q5XUX0 539 aaPredicted RBP25.15■■□□□ 1.62
RPN1-202ENST00000476931 RAB3GAP2Q9H2M9 1393 aa25.12■■□□□ 1.61
RPN1-202ENST00000476931 RPRD2Q5VT52 1461 aaKnown RBP25.12■■□□□ 1.61
RPN1-202ENST00000476931 TNRQ92752 1358 aa25.1■■□□□ 1.61
RPN1-202ENST00000476931 SLC4A1APQ9BWU0 796 aaKnown RBP25.1■■□□□ 1.61
RPN1-202ENST00000476931 IQGAP3Q86VI3 1631 aa25.1■■□□□ 1.61
RPN1-202ENST00000476931 CAMSAP1Q5T5Y3 1602 aa25.09■■□□□ 1.61
RPN1-202ENST00000476931 CEP152O94986 1710 aa25.09■■□□□ 1.61
RPN1-202ENST00000476931 UHRF1BP1Q6BDS2 1440 aa25.08■■□□□ 1.61
RPN1-202ENST00000476931 EFCAB6Q5THR3 1501 aa25.07■■□□□ 1.6
RPN1-202ENST00000476931 TET3O43151 1660 aa25.07■■□□□ 1.6
RPN1-202ENST00000476931 MPHOSPH9Q99550 1183 aa25.06■■□□□ 1.6
RPN1-202ENST00000476931 SLC52A1Q9NWF4 448 aa25.06■■□□□ 1.6
RPN1-202ENST00000476931 ERVK-7P63135 1459 aa25.05■■□□□ 1.6
RPN1-202ENST00000476931 PKD2Q13563 968 aa25.04■■□□□ 1.6
RPN1-202ENST00000476931 SPATA31D1Q6ZQQ2 1576 aa25.04■■□□□ 1.6
RPN1-202ENST00000476931 NOS1P29475 1434 aa25.03■■□□□ 1.6
RPN1-202ENST00000476931 NLRP1Q9C000 1473 aa25.02■■□□□ 1.6
RPN1-202ENST00000476931 THEMISQ8N1K5 641 aaPredicted RBP24.99■■□□□ 1.59
RPN1-202ENST00000476931 PREX1Q8TCU6 1659 aa24.97■■□□□ 1.59
RPN1-202ENST00000476931 LMTK3Q96Q04 1460 aa24.97■■□□□ 1.59
RPN1-202ENST00000476931 IDI1Q13907 227 aa24.96■■□□□ 1.59
RPN1-202ENST00000476931 A2ML1A8K2U0 1454 aa24.96■■□□□ 1.59
RPN1-202ENST00000476931 PTPRTO14522 1441 aa24.95■■□□□ 1.58
RPN1-202ENST00000476931 CFAP65Q6ZU64 1925 aaKnown RBP24.93■■□□□ 1.58
RPN1-202ENST00000476931 STAG3Q9UJ98 1225 aa24.93■■□□□ 1.58
RPN1-202ENST00000476931 E9PCH4 1651 aa24.93■■□□□ 1.58
RPN1-202ENST00000476931 HSPA2P54652 639 aa24.89■■□□□ 1.58
RPN1-202ENST00000476931 MYO3AQ8NEV4 1616 aa24.89■■□□□ 1.57
RPN1-202ENST00000476931 CEP170BQ9Y4F5 1589 aaPredicted RBP24.88■■□□□ 1.57
RPN1-202ENST00000476931 PCGF6Q9BYE7 350 aa24.88■■□□□ 1.57
RPN1-202ENST00000476931 UGGT1Q9NYU2 1555 aa24.86■■□□□ 1.57
RPN1-202ENST00000476931 SYNMO15061 1565 aa24.85■■□□□ 1.57
RPN1-202ENST00000476931 HDGFP51858 240 aaKnown RBP24.85■■□□□ 1.57
RPN1-202ENST00000476931 FOXD1Q16676 465 aa24.85■■□□□ 1.57
RPN1-202ENST00000476931 DMRT2Q9Y5R5 561 aa24.85■■□□□ 1.57
RPN1-202ENST00000476931 ZNF142P52746 1687 aaPredicted RBP24.85■■□□□ 1.57
RPN1-202ENST00000476931 ANKLE2Q86XL3 938 aa24.84■■□□□ 1.57
RPN1-202ENST00000476931 PLA2R1Q13018 1463 aa24.83■■□□□ 1.56
RPN1-202ENST00000476931 TRPM2O94759 1503 aa24.81■■□□□ 1.56
RPN1-202ENST00000476931 CHGAP10645 457 aaKnown RBP24.8■■□□□ 1.56
RPN1-202ENST00000476931 EID1Q9Y6B2 187 aa24.8■■□□□ 1.56
RPN1-202ENST00000476931 KDM5AP29375 1690 aaKnown RBP24.78■■□□□ 1.56
RPN1-202ENST00000476931 SPHKAPQ2M3C7 1700 aa24.78■■□□□ 1.56
RPN1-202ENST00000476931 PIK3C2BO00750 1634 aa24.78■■□□□ 1.56
RPN1-202ENST00000476931 CCDC144AA2RUR9 1427 aa24.78■■□□□ 1.56
RPN1-202ENST00000476931 TMEM2Q9UHN6 1383 aa24.77■■□□□ 1.56
RPN1-202ENST00000476931 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.76■■□□□ 1.55
RPN1-202ENST00000476931 ANKRD30BQ9BXX2 1392 aa24.76■■□□□ 1.55
RPN1-202ENST00000476931 TXNDC2Q86VQ3 553 aa24.75■■□□□ 1.55
RPN1-202ENST00000476931 UBR1Q8IWV7 1749 aa24.73■■□□□ 1.55
RPN1-202ENST00000476931 ADGRB3O60242 1522 aa24.73■■□□□ 1.55
RPN1-202ENST00000476931 SLIT1O75093 1534 aa24.72■■□□□ 1.55
RPN1-202ENST00000476931 ARHGAP23Q9P227 1491 aa24.72■■□□□ 1.55
RPN1-202ENST00000476931 NCKAP5LQ9HCH0 1330 aa24.72■■□□□ 1.55
RPN1-202ENST00000476931 RPGRIP1LQ68CZ1 1315 aa24.71■■□□□ 1.55
RPN1-202ENST00000476931 ZNF326Q5BKZ1 582 aaKnown RBP24.71■■□□□ 1.55
RPN1-202ENST00000476931 TMEM131LA2VDJ0 1609 aa24.7■■□□□ 1.54
RPN1-202ENST00000476931 LTKP29376 864 aa24.69■■□□□ 1.54
RPN1-202ENST00000476931 CLTCL1P53675 1640 aa24.67■■□□□ 1.54
RPN1-202ENST00000476931 DHX57Q6P158 1386 aaKnown RBP24.67■■□□□ 1.54
RPN1-202ENST00000476931 MED14O60244 1454 aa24.65■■□□□ 1.54
RPN1-202ENST00000476931 SCAF11Q99590 1463 aaKnown RBP24.65■■□□□ 1.54
RPN1-202ENST00000476931 PPP1R15AO75807 674 aaPredicted RBP24.65■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms