RNA–Protein interactions for RNA: ENST00000475622.5

LPCAT1-202, Transcript of lysophosphatidylcholine acyltransferase 1, humanhuman

TSL 5

Gene LPCAT1, Length 5,610 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1-202ENST00000475622 PDE4CQ08493 712 aa22.01■■□□□ 1.11
LPCAT1-202ENST00000475622 DDX11L8A8MPP1 907 aa22■■□□□ 1.11
LPCAT1-202ENST00000475622 KIF3BO15066 747 aa22■■□□□ 1.11
LPCAT1-202ENST00000475622 RRP7AQ9Y3A4 280 aaKnown RBP22■■□□□ 1.11
LPCAT1-202ENST00000475622 SF3A1Q15459 793 aaKnown RBP22■■□□□ 1.11
LPCAT1-202ENST00000475622 TOMM22Q9NS69 142 aa22■■□□□ 1.11
LPCAT1-202ENST00000475622 CARMIL2Q6F5E8 1435 aa21.98■■□□□ 1.11
LPCAT1-202ENST00000475622 NUTM2DQ5VT03 806 aaPredicted RBP21.98■■□□□ 1.11
LPCAT1-202ENST00000475622 SLC4A3P48751 1232 aa21.98■■□□□ 1.11
LPCAT1-202ENST00000475622 KIF3AQ9Y496 699 aa21.98■■□□□ 1.11
LPCAT1-202ENST00000475622 NACADO15069 1562 aa21.98■■□□□ 1.11
LPCAT1-202ENST00000475622 TPM3P06753 285 aa21.98■■□□□ 1.11
LPCAT1-202ENST00000475622 PDE4AP27815 886 aa21.97■■□□□ 1.11
LPCAT1-202ENST00000475622 TMX4Q9H1E5 349 aaPredicted RBP21.97■■□□□ 1.11
LPCAT1-202ENST00000475622 CECR2Q9BXF3 1484 aa21.97■■□□□ 1.11
LPCAT1-202ENST00000475622 AMPHP49418 695 aa21.96■■□□□ 1.11
LPCAT1-202ENST00000475622 USP35Q9P2H5 1018 aa21.96■■□□□ 1.11
LPCAT1-202ENST00000475622 PHLDB1Q86UU1 1377 aa21.96■■□□□ 1.11
LPCAT1-202ENST00000475622 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.96■■□□□ 1.11
LPCAT1-202ENST00000475622 CENPQQ7L2Z9 268 aaPredicted RBP21.96■■□□□ 1.11
LPCAT1-202ENST00000475622 NGDNQ8NEJ9 315 aaKnown RBP21.96■■□□□ 1.11
LPCAT1-202ENST00000475622 DDX49Q9Y6V7 483 aaKnown RBP21.96■■□□□ 1.11
LPCAT1-202ENST00000475622 LTV1Q96GA3 475 aaPredicted RBP21.95■■□□□ 1.1
LPCAT1-202ENST00000475622 FAM161AQ3B820 660 aa21.95■■□□□ 1.1
LPCAT1-202ENST00000475622 BCL2L13Q9BXK5 485 aa21.95■■□□□ 1.1
LPCAT1-202ENST00000475622 MYBBP1AQ9BQG0 1328 aaKnown RBP21.94■■□□□ 1.1
LPCAT1-202ENST00000475622 PLIN1O60240 522 aa21.94■■□□□ 1.1
LPCAT1-202ENST00000475622 HNRNPMP52272 730 aaKnown RBP eCLIP21.94■■□□□ 1.13e-6■□□□□ 9
LPCAT1-202ENST00000475622 KIF15Q9NS87 1388 aa21.93■■□□□ 1.1
LPCAT1-202ENST00000475622 ELL2O00472 640 aaPredicted RBP21.93■■□□□ 1.1
LPCAT1-202ENST00000475622 ANKRD45Q5TZF3 282 aa21.93■■□□□ 1.1
LPCAT1-202ENST00000475622 RILPL2Q969X0 211 aa21.93■■□□□ 1.1
LPCAT1-202ENST00000475622 HSP90AA2PQ14568 343 aaPredicted RBP21.92■■□□□ 1.1
LPCAT1-202ENST00000475622 H3BQV1 296 aa21.91■■□□□ 1.1
LPCAT1-202ENST00000475622 IFFO2Q5TF58 517 aa21.91■■□□□ 1.1
LPCAT1-202ENST00000475622 FOXD4L6Q3SYB3 417 aaPredicted RBP21.91■■□□□ 1.1
LPCAT1-202ENST00000475622 FOXD4L3Q6VB84 417 aaPredicted RBP21.91■■□□□ 1.1
LPCAT1-202ENST00000475622 TRAK1Q9UPV9 953 aa21.91■■□□□ 1.1
LPCAT1-202ENST00000475622 EXOC6Q8TAG9 804 aa21.9■■□□□ 1.1
LPCAT1-202ENST00000475622 PANK3Q9H999 370 aa21.9■■□□□ 1.1
LPCAT1-202ENST00000475622 ST20-MTHFSA0A0A6YYL1 179 aa21.9■■□□□ 1.1
LPCAT1-202ENST00000475622 CCDC9Q9Y3X0 531 aaKnown RBP21.9■■□□□ 1.1
LPCAT1-202ENST00000475622 GSE1Q14687 1217 aa21.9■■□□□ 1.1
LPCAT1-202ENST00000475622 NUTM2FA1L443 756 aa21.89■■□□□ 1.1
LPCAT1-202ENST00000475622 FRAT2O75474 233 aaPredicted RBP21.89■■□□□ 1.1
LPCAT1-202ENST00000475622 PES1O00541 588 aaKnown RBP21.89■■□□□ 1.1
LPCAT1-202ENST00000475622 CEP89Q96ST8 783 aa21.88■■□□□ 1.09
LPCAT1-202ENST00000475622 MARCH6O60337 910 aa21.88■■□□□ 1.09
LPCAT1-202ENST00000475622 FAM184AQ8NB25 1140 aa21.88■■□□□ 1.09
LPCAT1-202ENST00000475622 SKOR2Q2VWA4 1001 aaPredicted RBP21.87■■□□□ 1.09
LPCAT1-202ENST00000475622 ZKSCAN2Q63HK3 967 aa21.87■■□□□ 1.09
LPCAT1-202ENST00000475622 ATP6V1DQ9Y5K8 247 aa21.87■■□□□ 1.09
LPCAT1-202ENST00000475622 GOLGA6L19H0YKK7 550 aa21.87■■□□□ 1.09
LPCAT1-202ENST00000475622 RRP1P56182 461 aaKnown RBP21.86■■□□□ 1.09
LPCAT1-202ENST00000475622 CRBNQ96SW2 442 aa21.86■■□□□ 1.09
LPCAT1-202ENST00000475622 ABCC8Q09428 1581 aa21.86■■□□□ 1.09
LPCAT1-202ENST00000475622 PRM3Q9NNZ6 103 aa21.86■■□□□ 1.09
LPCAT1-202ENST00000475622 BECN2A8MW95 431 aa21.86■■□□□ 1.09
LPCAT1-202ENST00000475622 G3V3G9 751 aa21.85■■□□□ 1.09
LPCAT1-202ENST00000475622 TPD52L1Q16890 204 aaPredicted RBP21.85■■□□□ 1.09
LPCAT1-202ENST00000475622 DCAF8Q5TAQ9 597 aa21.85■■□□□ 1.09
LPCAT1-202ENST00000475622 COG6Q9Y2V7 657 aa21.85■■□□□ 1.09
LPCAT1-202ENST00000475622 RSPH6AQ9H0K4 717 aa21.85■■□□□ 1.09
LPCAT1-202ENST00000475622 WASHC2CQ9Y4E1 1318 aa21.85■■□□□ 1.09
LPCAT1-202ENST00000475622 E9PSI1 815 aa21.85■■□□□ 1.09
LPCAT1-202ENST00000475622 TDRD9Q8NDG6 1382 aaKnown RBP21.84■■□□□ 1.09
LPCAT1-202ENST00000475622 CCAR2Q8N163 923 aaKnown RBP21.84■■□□□ 1.09
LPCAT1-202ENST00000475622 GTF2E1P29083 439 aaPredicted RBP21.84■■□□□ 1.09
LPCAT1-202ENST00000475622 EID1Q9Y6B2 187 aa21.84■■□□□ 1.09
LPCAT1-202ENST00000475622 CCDC88BA6NC98 1476 aa21.83■■□□□ 1.09
LPCAT1-202ENST00000475622 VPS53Q5VIR6 699 aa21.83■■□□□ 1.09
LPCAT1-202ENST00000475622 PRKRIP1Q9H875 184 aaPredicted RBP21.83■■□□□ 1.08
LPCAT1-202ENST00000475622 TSR1Q2NL82 804 aaKnown RBP21.82■■□□□ 1.08
LPCAT1-202ENST00000475622 CGNL1Q0VF96 1302 aa21.81■■□□□ 1.08
LPCAT1-202ENST00000475622 RSPH4AQ5TD94 716 aa21.79■■□□□ 1.08
LPCAT1-202ENST00000475622 MCTP1Q6DN14 999 aa21.79■■□□□ 1.08
LPCAT1-202ENST00000475622 DIAPH3Q9NSV4 1193 aa21.79■■□□□ 1.08
LPCAT1-202ENST00000475622 CHMP4CQ96CF2 233 aa21.79■■□□□ 1.08
LPCAT1-202ENST00000475622 ZBED9Q6R2W3 1325 aa21.79■■□□□ 1.08
LPCAT1-202ENST00000475622 AKAP17AQ02040 695 aaKnown RBP21.78■■□□□ 1.08
LPCAT1-202ENST00000475622 APAF1O14727 1248 aa21.76■■□□□ 1.07
LPCAT1-202ENST00000475622 FHOD3Q2V2M9 1422 aa21.76■■□□□ 1.07
LPCAT1-202ENST00000475622 TPM1P09493 284 aa21.76■■□□□ 1.07
LPCAT1-202ENST00000475622 ZNF592Q92610 1267 aa21.75■■□□□ 1.07
LPCAT1-202ENST00000475622 REC8O95072 547 aa21.75■■□□□ 1.07
LPCAT1-202ENST00000475622 COG3Q96JB2 828 aa21.74■■□□□ 1.07
LPCAT1-202ENST00000475622 CCDC144AA2RUR9 1427 aa21.74■■□□□ 1.07
LPCAT1-202ENST00000475622 ANO8Q9HCE9 1232 aaPredicted RBP21.73■■□□□ 1.07
LPCAT1-202ENST00000475622 SYNE3Q6ZMZ3 975 aa21.73■■□□□ 1.07
LPCAT1-202ENST00000475622 VSIG10Q8N0Z9 540 aa21.73■■□□□ 1.07
LPCAT1-202ENST00000475622 ZKSCAN1P17029 563 aaPredicted RBP21.72■■□□□ 1.07
LPCAT1-202ENST00000475622 RUFY2Q8WXA3 655 aa21.72■■□□□ 1.07
LPCAT1-202ENST00000475622 CPLX2Q6PUV4 134 aaKnown RBP21.72■■□□□ 1.07
LPCAT1-202ENST00000475622 DDX19BQ9UMR2 479 aa21.72■■□□□ 1.07
LPCAT1-202ENST00000475622 DHX57Q6P158 1386 aaKnown RBP21.72■■□□□ 1.07
LPCAT1-202ENST00000475622 C1orf141Q5JVX7 400 aa21.72■■□□□ 1.07
LPCAT1-202ENST00000475622 TEFQ10587 303 aa21.71■■□□□ 1.07
LPCAT1-202ENST00000475622 CCDC18Q5T9S5 1454 aa21.71■■□□□ 1.07
LPCAT1-202ENST00000475622 TPM2P07951 284 aa21.71■■□□□ 1.07
LPCAT1-202ENST00000475622 GPS2Q13227 327 aa21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms