RNA–Protein interactions for RNA: ENST00000472411.1

TMEM9-208, Transcript of transmembrane protein 9, humanhuman

TSL 2

Gene TMEM9, Length 2,892 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM9-208ENST00000472411 KTN1Q86UP2 1357 aaKnown RBP14.24□□□□□ -0.13
TMEM9-208ENST00000472411 NBR1Q14596 966 aa14.24□□□□□ -0.13
TMEM9-208ENST00000472411 ANP32AP39687 249 aaKnown RBP14.24□□□□□ -0.13
TMEM9-208ENST00000472411 HNRNPMP52272 730 aaKnown RBP eCLIP14.24□□□□□ -0.13
TMEM9-208ENST00000472411 ABCC10Q5T3U5 1492 aa14.24□□□□□ -0.13
TMEM9-208ENST00000472411 SHANK2Q9UPX8 1470 aa14.24□□□□□ -0.13
TMEM9-208ENST00000472411 SALL2Q9Y467 1007 aaPredicted RBP14.24□□□□□ -0.13
TMEM9-208ENST00000472411 MAGI1Q96QZ7 1491 aaPredicted RBP14.23□□□□□ -0.13
TMEM9-208ENST00000472411 RRP1P56182 461 aaKnown RBP14.23□□□□□ -0.13
TMEM9-208ENST00000472411 KDM5DQ9BY66 1539 aa14.23□□□□□ -0.13
TMEM9-208ENST00000472411 EXOC6Q8TAG9 804 aa14.22□□□□□ -0.13
TMEM9-208ENST00000472411 SYNJ2O15056 1496 aa14.22□□□□□ -0.13
TMEM9-208ENST00000472411 E9PCH4 1651 aa14.22□□□□□ -0.13
TMEM9-208ENST00000472411 ATP10BO94823 1461 aa14.21□□□□□ -0.13
TMEM9-208ENST00000472411 PTPRGP23470 1445 aa14.21□□□□□ -0.13
TMEM9-208ENST00000472411 RCAN3Q9UKA8 241 aa14.21□□□□□ -0.13
TMEM9-208ENST00000472411 NLRP13Q86W25 1043 aa14.2□□□□□ -0.14
TMEM9-208ENST00000472411 ZBTB47Q9UFB7 747 aaPredicted RBP14.2□□□□□ -0.14
TMEM9-208ENST00000472411 PER1O15534 1290 aaPredicted RBP14.19□□□□□ -0.14
TMEM9-208ENST00000472411 ABCA8O94911 1581 aa14.18□□□□□ -0.14
TMEM9-208ENST00000472411 PARD3Q8TEW0 1356 aa14.18□□□□□ -0.14
TMEM9-208ENST00000472411 NBPF1Q3BBV0 1214 aa14.18□□□□□ -0.14
TMEM9-208ENST00000472411 NUP160Q12769 1436 aa14.17□□□□□ -0.14
TMEM9-208ENST00000472411 RGL3Q3MIN7 710 aa14.17□□□□□ -0.14
TMEM9-208ENST00000472411 PDE3BQ13370 1112 aa14.17□□□□□ -0.14
TMEM9-208ENST00000472411 CDCA7LQ96GN5 454 aa14.16□□□□□ -0.14
TMEM9-208ENST00000472411 PRAG1Q86YV5 1406 aa14.16□□□□□ -0.14
TMEM9-208ENST00000472411 TRPM1Q7Z4N2 1603 aa14.15□□□□□ -0.14
TMEM9-208ENST00000472411 FAM135AQ9P2D6 1515 aa14.15□□□□□ -0.14
TMEM9-208ENST00000472411 ARHGEF5Q12774 1597 aa14.15□□□□□ -0.14
TMEM9-208ENST00000472411 TCERG1O14776 1098 aaKnown RBP14.15□□□□□ -0.14
TMEM9-208ENST00000472411 CCDC144AA2RUR9 1427 aa14.14□□□□□ -0.15
TMEM9-208ENST00000472411 CC2D1BQ5T0F9 858 aaKnown RBP14.13□□□□□ -0.15
TMEM9-208ENST00000472411 PDE4AP27815 886 aa14.12□□□□□ -0.15
TMEM9-208ENST00000472411 NPM2Q86SE8 214 aaKnown RBP14.12□□□□□ -0.15
TMEM9-208ENST00000472411 TESK2Q96S53 571 aa14.12□□□□□ -0.15
TMEM9-208ENST00000472411 CCDC141Q6ZP82 1450 aa14.11□□□□□ -0.15
TMEM9-208ENST00000472411 GPRASP1Q5JY77 1395 aa14.11□□□□□ -0.15
TMEM9-208ENST00000472411 CDC42BPBQ9Y5S2 1711 aa14.11□□□□□ -0.15
TMEM9-208ENST00000472411 PLA2R1Q13018 1463 aa14.11□□□□□ -0.15
TMEM9-208ENST00000472411 PLIN1O60240 522 aa14.11□□□□□ -0.15
TMEM9-208ENST00000472411 RSPH4AQ5TD94 716 aa14.11□□□□□ -0.15
TMEM9-208ENST00000472411 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.11□□□□□ -0.15
TMEM9-208ENST00000472411 PANK3Q9H999 370 aa14.11□□□□□ -0.15
TMEM9-208ENST00000472411 WASHC2CQ9Y4E1 1318 aa14.1□□□□□ -0.15
TMEM9-208ENST00000472411 BACH2Q9BYV9 841 aa14.1□□□□□ -0.15
TMEM9-208ENST00000472411 SAMD9LQ8IVG5 1584 aa14.1□□□□□ -0.15
TMEM9-208ENST00000472411 DISP3Q9P2K9 1392 aa14.1□□□□□ -0.15
TMEM9-208ENST00000472411 ERCC6Q03468 1493 aa14.1□□□□□ -0.15
TMEM9-208ENST00000472411 RTL5Q5HYW3 569 aaPredicted RBP14.09□□□□□ -0.15
TMEM9-208ENST00000472411 A2MP01023 1474 aa14.09□□□□□ -0.15
TMEM9-208ENST00000472411 COL17A1Q9UMD9 1497 aaPredicted RBP14.08□□□□□ -0.15
TMEM9-208ENST00000472411 MS4A1P11836 297 aa14.08□□□□□ -0.16
TMEM9-208ENST00000472411 BLMP54132 1417 aaPredicted RBP14.06□□□□□ -0.16
TMEM9-208ENST00000472411 PRDM15P57071 1507 aaPredicted RBP14.06□□□□□ -0.16
TMEM9-208ENST00000472411 PREX2Q70Z35 1606 aa14.05□□□□□ -0.16
TMEM9-208ENST00000472411 CRBNQ96SW2 442 aa14.05□□□□□ -0.16
TMEM9-208ENST00000472411 INSRP06213 1382 aa14.05□□□□□ -0.16
TMEM9-208ENST00000472411 ERBINQ96RT1 1412 aa14.05□□□□□ -0.16
TMEM9-208ENST00000472411 TMF1P82094 1093 aa14.05□□□□□ -0.16
TMEM9-208ENST00000472411 SKAP1Q86WV1 359 aa14.05□□□□□ -0.16
TMEM9-208ENST00000472411 LAMC1P11047 1609 aa14.04□□□□□ -0.16
TMEM9-208ENST00000472411 MYO5CQ9NQX4 1742 aa14.04□□□□□ -0.16
TMEM9-208ENST00000472411 SYCP2Q9BX26 1530 aa14.03□□□□□ -0.16
TMEM9-208ENST00000472411 ADAMTS8Q9UP79 889 aa14.03□□□□□ -0.16
TMEM9-208ENST00000472411 UNC13BO14795 1591 aa14.03□□□□□ -0.16
TMEM9-208ENST00000472411 ZMYM4Q5VZL5 1548 aa14.02□□□□□ -0.16
TMEM9-208ENST00000472411 PLEKHH2Q8IVE3 1493 aa14.02□□□□□ -0.16
TMEM9-208ENST00000472411 LAS1LQ9Y4W2 734 aaKnown RBP14.02□□□□□ -0.17
TMEM9-208ENST00000472411 C20orf194Q5TEA3 1177 aa14.01□□□□□ -0.17
TMEM9-208ENST00000472411 MAST1Q9Y2H9 1570 aa14□□□□□ -0.17
TMEM9-208ENST00000472411 ARHGAP5Q13017 1502 aa14□□□□□ -0.17
TMEM9-208ENST00000472411 IQGAP3Q86VI3 1631 aa13.99□□□□□ -0.17
TMEM9-208ENST00000472411 EIF2AK4Q9P2K8 1649 aaKnown RBP13.99□□□□□ -0.17
TMEM9-208ENST00000472411 PRKCSHP14314 528 aaPredicted RBP13.99□□□□□ -0.17
TMEM9-208ENST00000472411 NEFMP07197 916 aa13.98□□□□□ -0.17
TMEM9-208ENST00000472411 TTC37Q6PGP7 1564 aa13.98□□□□□ -0.17
TMEM9-208ENST00000472411 ATP10AO60312 1499 aa13.98□□□□□ -0.17
TMEM9-208ENST00000472411 PPP2R1AP30153 589 aa13.97□□□□□ -0.17
TMEM9-208ENST00000472411 KNSTRNQ9Y448 316 aa13.97□□□□□ -0.17
TMEM9-208ENST00000472411 MAGI2Q86UL8 1455 aa13.97□□□□□ -0.17
TMEM9-208ENST00000472411 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.97□□□□□ -0.176e-6■■□□□ 13.3
TMEM9-208ENST00000472411 PLEKHH1Q9ULM0 1364 aa13.97□□□□□ -0.17
TMEM9-208ENST00000472411 DUSP27Q5VZP5 1158 aa13.97□□□□□ -0.17
TMEM9-208ENST00000472411 WDR7Q9Y4E6 1490 aa13.96□□□□□ -0.18
TMEM9-208ENST00000472411 USP35Q9P2H5 1018 aa13.96□□□□□ -0.18
TMEM9-208ENST00000472411 KDM2BQ8NHM5 1336 aa13.95□□□□□ -0.18
TMEM9-208ENST00000472411 PLXNC1O60486 1568 aa13.95□□□□□ -0.18
TMEM9-208ENST00000472411 WDR43Q15061 677 aaKnown RBP eCLIP13.95□□□□□ -0.18
TMEM9-208ENST00000472411 AMER1Q5JTC6 1135 aaPredicted RBP13.95□□□□□ -0.18
TMEM9-208ENST00000472411 PPM1GO15355 546 aaPredicted RBP13.94□□□□□ -0.18
TMEM9-208ENST00000472411 DUOX2Q9NRD8 1548 aa13.94□□□□□ -0.18
TMEM9-208ENST00000472411 ZNF521Q96K83 1311 aa13.93□□□□□ -0.18
TMEM9-208ENST00000472411 RNF17Q9BXT8 1623 aaKnown RBP13.93□□□□□ -0.18
TMEM9-208ENST00000472411 GOLGA2Q08379 1002 aa13.93□□□□□ -0.18
TMEM9-208ENST00000472411 DDRGK1Q96HY6 314 aa13.93□□□□□ -0.18
TMEM9-208ENST00000472411 CENPQQ7L2Z9 268 aaPredicted RBP13.92□□□□□ -0.18
TMEM9-208ENST00000472411 SLFN5Q08AF3 891 aa13.89□□□□□ -0.19
TMEM9-208ENST00000472411 SLC4A3P48751 1232 aa13.89□□□□□ -0.19
TMEM9-208ENST00000472411 CDCA8Q53HL2 280 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms