RNA–Protein interactions for RNA: ENST00000471724.5

SSR4-207, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-207ENST00000471724 PTPRMP28827 1452 aa21.2■□□□□ 0.98
SSR4-207ENST00000471724 PRDM15P57071 1507 aaPredicted RBP21.19■□□□□ 0.98
SSR4-207ENST00000471724 ZC3H13Q5T200 1668 aaKnown RBP21.18■□□□□ 0.98
SSR4-207ENST00000471724 NAIPQ13075 1403 aa21.17■□□□□ 0.98
SSR4-207ENST00000471724 UNC13BO14795 1591 aa21.17■□□□□ 0.98
SSR4-207ENST00000471724 RIMS1Q86UR5 1692 aaKnown RBP21.17■□□□□ 0.98
SSR4-207ENST00000471724 MROH1Q8NDA8 1641 aa21.16■□□□□ 0.98
SSR4-207ENST00000471724 MLECQ14165 292 aa21.15■□□□□ 0.98
SSR4-207ENST00000471724 MROH2AA6NES4 1674 aa21.14■□□□□ 0.97
SSR4-207ENST00000471724 TRIM26Q12899 539 aaPredicted RBP21.13■□□□□ 0.97
SSR4-207ENST00000471724 KDM5DQ9BY66 1539 aa21.13■□□□□ 0.97
SSR4-207ENST00000471724 KIF3BO15066 747 aa21.12■□□□□ 0.97
SSR4-207ENST00000471724 CEP152O94986 1710 aa21.11■□□□□ 0.97
SSR4-207ENST00000471724 CLTCQ00610 1675 aaKnown RBP21.11■□□□□ 0.97
SSR4-207ENST00000471724 CNTLNQ9NXG0 1405 aa21.09■□□□□ 0.97
SSR4-207ENST00000471724 IQGAP3Q86VI3 1631 aa21.07■□□□□ 0.96
SSR4-207ENST00000471724 VWDEQ8N2E2 1590 aa21.07■□□□□ 0.96
SSR4-207ENST00000471724 PPP6R1Q9UPN7 881 aa21.07■□□□□ 0.96
SSR4-207ENST00000471724 ESF1Q9H501 851 aaKnown RBP21.06■□□□□ 0.96
SSR4-207ENST00000471724 CAMSAP1Q5T5Y3 1602 aa21.06■□□□□ 0.96
SSR4-207ENST00000471724 KANK1Q14678 1352 aa21.06■□□□□ 0.96
SSR4-207ENST00000471724 SETD5Q9C0A6 1442 aa21.05■□□□□ 0.96
SSR4-207ENST00000471724 ABCC3O15438 1527 aa21.05■□□□□ 0.96
SSR4-207ENST00000471724 GGT6Q6P531 493 aa21.05■□□□□ 0.96
SSR4-207ENST00000471724 TET3O43151 1660 aa21.03■□□□□ 0.96
SSR4-207ENST00000471724 LMTK2Q8IWU2 1503 aa21.03■□□□□ 0.96
SSR4-207ENST00000471724 ACIN1Q9UKV3 1341 aaKnown RBP21.03■□□□□ 0.96
SSR4-207ENST00000471724 C3P01024 1663 aa21.02■□□□□ 0.96
SSR4-207ENST00000471724 EFCAB6Q5THR3 1501 aa20.99■□□□□ 0.95
SSR4-207ENST00000471724 RAB3GAP2Q9H2M9 1393 aa20.98■□□□□ 0.95
SSR4-207ENST00000471724 PLPPR3Q6T4P5 718 aa20.97■□□□□ 0.95
SSR4-207ENST00000471724 WASHC2CQ9Y4E1 1318 aa20.97■□□□□ 0.95
SSR4-207ENST00000471724 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.96■□□□□ 0.95
SSR4-207ENST00000471724 NUP155O75694 1391 aa20.95■□□□□ 0.94
SSR4-207ENST00000471724 PZPP20742 1482 aa20.94■□□□□ 0.94
SSR4-207ENST00000471724 ARHGAP31Q2M1Z3 1444 aa20.93■□□□□ 0.94
SSR4-207ENST00000471724 RPRD2Q5VT52 1461 aaKnown RBP20.93■□□□□ 0.94
SSR4-207ENST00000471724 LMTK3Q96Q04 1460 aa20.93■□□□□ 0.94
SSR4-207ENST00000471724 E9PCH4 1651 aa20.93■□□□□ 0.94
SSR4-207ENST00000471724 PREX1Q8TCU6 1659 aa20.93■□□□□ 0.94
SSR4-207ENST00000471724 SETD1BQ9UPS6 1966 aaKnown RBP20.92■□□□□ 0.94
SSR4-207ENST00000471724 CEBPAP49715 358 aaPredicted RBP20.91■□□□□ 0.94
SSR4-207ENST00000471724 ZMYM3Q14202 1370 aa20.9■□□□□ 0.94
SSR4-207ENST00000471724 HRCP23327 699 aa20.9■□□□□ 0.94
SSR4-207ENST00000471724 NPATQ14207 1427 aa20.88■□□□□ 0.93
SSR4-207ENST00000471724 TRIM52Q96A61 297 aa20.88■□□□□ 0.93
SSR4-207ENST00000471724 SPATA31D1Q6ZQQ2 1576 aa20.88■□□□□ 0.93
SSR4-207ENST00000471724 CFAP65Q6ZU64 1925 aaKnown RBP20.88■□□□□ 0.93
SSR4-207ENST00000471724 SPHKAPQ2M3C7 1700 aa20.87■□□□□ 0.93
SSR4-207ENST00000471724 UHRF1BP1Q6BDS2 1440 aa20.86■□□□□ 0.93
SSR4-207ENST00000471724 ERVK-7P63135 1459 aa20.85■□□□□ 0.93
SSR4-207ENST00000471724 MYO3AQ8NEV4 1616 aa20.85■□□□□ 0.93
SSR4-207ENST00000471724 ZNF142P52746 1687 aaPredicted RBP20.83■□□□□ 0.92
SSR4-207ENST00000471724 PCGF6Q9BYE7 350 aa20.82■□□□□ 0.92
SSR4-207ENST00000471724 SLC4A1APQ9BWU0 796 aaKnown RBP20.8■□□□□ 0.92
SSR4-207ENST00000471724 SYNMO15061 1565 aa20.8■□□□□ 0.92
SSR4-207ENST00000471724 NOS1P29475 1434 aa20.78■□□□□ 0.92
SSR4-207ENST00000471724 TNRQ92752 1358 aa20.78■□□□□ 0.92
SSR4-207ENST00000471724 TRPM2O94759 1503 aa20.78■□□□□ 0.92
SSR4-207ENST00000471724 HSPA2P54652 639 aa20.77■□□□□ 0.92
SSR4-207ENST00000471724 PIK3C2BO00750 1634 aa20.77■□□□□ 0.92
SSR4-207ENST00000471724 NLRP1Q9C000 1473 aa20.76■□□□□ 0.91
SSR4-207ENST00000471724 KDM5AP29375 1690 aaKnown RBP20.76■□□□□ 0.91
SSR4-207ENST00000471724 MPHOSPH9Q99550 1183 aa20.75■□□□□ 0.91
SSR4-207ENST00000471724 CEP170BQ9Y4F5 1589 aaPredicted RBP20.75■□□□□ 0.91
SSR4-207ENST00000471724 PKD2Q13563 968 aa20.74■□□□□ 0.91
SSR4-207ENST00000471724 PTPRTO14522 1441 aa20.73■□□□□ 0.91
SSR4-207ENST00000471724 FBXO31Q5XUX0 539 aaPredicted RBP20.72■□□□□ 0.91
SSR4-207ENST00000471724 KIF1BO60333 1816 aa20.71■□□□□ 0.91
SSR4-207ENST00000471724 CLTCL1P53675 1640 aa20.71■□□□□ 0.91
SSR4-207ENST00000471724 A2ML1A8K2U0 1454 aa20.7■□□□□ 0.9
SSR4-207ENST00000471724 UBR1Q8IWV7 1749 aa20.7■□□□□ 0.9
SSR4-207ENST00000471724 ADGRB3O60242 1522 aa20.69■□□□□ 0.9
SSR4-207ENST00000471724 UGGT1Q9NYU2 1555 aa20.68■□□□□ 0.9
SSR4-207ENST00000471724 DMRT2Q9Y5R5 561 aa20.67■□□□□ 0.9
SSR4-207ENST00000471724 MYO5BQ9ULV0 1848 aa20.66■□□□□ 0.9
SSR4-207ENST00000471724 PLA2R1Q13018 1463 aa20.65■□□□□ 0.9
SSR4-207ENST00000471724 SLC52A1Q9NWF4 448 aa20.65■□□□□ 0.9
SSR4-207ENST00000471724 CCDC144AA2RUR9 1427 aa20.64■□□□□ 0.89
SSR4-207ENST00000471724 DHX57Q6P158 1386 aaKnown RBP20.64■□□□□ 0.89
SSR4-207ENST00000471724 TMEM131LA2VDJ0 1609 aa20.64■□□□□ 0.89
SSR4-207ENST00000471724 STRCQ7RTU9 1775 aa20.62■□□□□ 0.89
SSR4-207ENST00000471724 FOXD1Q16676 465 aa20.61■□□□□ 0.89
SSR4-207ENST00000471724 POLR1AO95602 1720 aaPredicted RBP20.61■□□□□ 0.89
SSR4-207ENST00000471724 NEURL4Q96JN8 1562 aa20.6■□□□□ 0.89
SSR4-207ENST00000471724 ANKRD30BQ9BXX2 1392 aa20.59■□□□□ 0.89
SSR4-207ENST00000471724 IDI1Q13907 227 aa20.57■□□□□ 0.88
SSR4-207ENST00000471724 SLIT1O75093 1534 aa20.55■□□□□ 0.88
SSR4-207ENST00000471724 STAG3Q9UJ98 1225 aa20.55■□□□□ 0.88
SSR4-207ENST00000471724 THEMISQ8N1K5 641 aaPredicted RBP20.54■□□□□ 0.88
SSR4-207ENST00000471724 IFT172Q9UG01 1749 aa20.53■□□□□ 0.88
SSR4-207ENST00000471724 ARHGAP23Q9P227 1491 aa20.52■□□□□ 0.88
SSR4-207ENST00000471724 PPLO60437 1756 aa20.51■□□□□ 0.87
SSR4-207ENST00000471724 CHGAP10645 457 aaKnown RBP20.49■□□□□ 0.87
SSR4-207ENST00000471724 SPATA31E1Q6ZUB1 1445 aa20.49■□□□□ 0.87
SSR4-207ENST00000471724 NEXMIFQ5QGS0 1516 aa20.48■□□□□ 0.87
SSR4-207ENST00000471724 TMEM2Q9UHN6 1383 aa20.48■□□□□ 0.87
SSR4-207ENST00000471724 CLSPNQ9HAW4 1339 aa20.48■□□□□ 0.87
SSR4-207ENST00000471724 NCKAP5LQ9HCH0 1330 aa20.48■□□□□ 0.87
SSR4-207ENST00000471724 SCAF11Q99590 1463 aaKnown RBP20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms