RNA–Protein interactions for RNA: ENST00000470985.3

LDHB-206, Transcript of lactate dehydrogenase B, humanhuman

TSL 1 (best)

Gene LDHB, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHB-206ENST00000470985 PHF8Q9UPP1 1060 aa13.3□□□□□ -0.28
LDHB-206ENST00000470985 PLB1Q6P1J6 1458 aa13.29□□□□□ -0.28
LDHB-206ENST00000470985 TMEM121BQ9BXQ6 578 aaPredicted RBP13.27□□□□□ -0.29
LDHB-206ENST00000470985 EPRSP07814 1512 aaKnown RBP13.27□□□□□ -0.29
LDHB-206ENST00000470985 ST18O60284 1047 aa13.26□□□□□ -0.29
LDHB-206ENST00000470985 ABCC2Q92887 1545 aa13.26□□□□□ -0.29
LDHB-206ENST00000470985 MADDQ8WXG6 1647 aa13.24□□□□□ -0.29
LDHB-206ENST00000470985 MICALL2Q8IY33 904 aa13.22□□□□□ -0.29
LDHB-206ENST00000470985 TTBK1Q5TCY1 1321 aaPredicted RBP13.2□□□□□ -0.3
LDHB-206ENST00000470985 ZNF710Q8N1W2 664 aa13.2□□□□□ -0.3
LDHB-206ENST00000470985 CUL7Q14999 1698 aa13.2□□□□□ -0.3
LDHB-206ENST00000470985 PLSCR2Q9NRY7 297 aa13.19□□□□□ -0.3
LDHB-206ENST00000470985 RIMBP2O15034 1052 aa13.18□□□□□ -0.3
LDHB-206ENST00000470985 LCE2DQ5TA82 110 aaPredicted RBP13.18□□□□□ -0.3
LDHB-206ENST00000470985 KIAA0586Q9BVV6 1533 aa13.18□□□□□ -0.3
LDHB-206ENST00000470985 DOK7Q18PE1 504 aa13.17□□□□□ -0.3
LDHB-206ENST00000470985 MS4A4AQ96JQ5 239 aa13.17□□□□□ -0.3
LDHB-206ENST00000470985 PTPRGP23470 1445 aa13.16□□□□□ -0.3
LDHB-206ENST00000470985 MED1Q15648 1581 aaPredicted RBP13.15□□□□□ -0.3
LDHB-206ENST00000470985 CHGAP10645 457 aaKnown RBP13.15□□□□□ -0.3
LDHB-206ENST00000470985 MFRPQ9BY79 579 aa13.15□□□□□ -0.3
LDHB-206ENST00000470985 BCORL1Q5H9F3 1711 aa13.15□□□□□ -0.3
LDHB-206ENST00000470985 FBXO22Q8NEZ5 403 aa13.14□□□□□ -0.31
LDHB-206ENST00000470985 RIMS1Q86UR5 1692 aaKnown RBP13.13□□□□□ -0.31
LDHB-206ENST00000470985 ERICH3Q5RHP9 1530 aa13.13□□□□□ -0.31
LDHB-206ENST00000470985 HS6ST3Q8IZP7 471 aa13.11□□□□□ -0.31
LDHB-206ENST00000470985 EMP3P54852 163 aa13.1□□□□□ -0.31
LDHB-206ENST00000470985 CDAN1Q8IWY9 1227 aa13.1□□□□□ -0.31
LDHB-206ENST00000470985 MARVELD3Q96A59 401 aa13.09□□□□□ -0.31
LDHB-206ENST00000470985 RYDENQ9NUL5 291 aaKnown RBP13.09□□□□□ -0.31
LDHB-206ENST00000470985 MAGI3Q5TCQ9 1506 aa13.08□□□□□ -0.31
LDHB-206ENST00000470985 UHRF1BP1LA0JNW5 1464 aa13.08□□□□□ -0.32
LDHB-206ENST00000470985 LTBP4Q8N2S1 1624 aa13.06□□□□□ -0.32
LDHB-206ENST00000470985 KDM5BQ9UGL1 1544 aa13.05□□□□□ -0.32
LDHB-206ENST00000470985 ARID4BQ4LE39 1312 aaPredicted RBP13.05□□□□□ -0.32
LDHB-206ENST00000470985 CD109Q6YHK3 1445 aa13.05□□□□□ -0.32
LDHB-206ENST00000470985 YEATS2Q9ULM3 1422 aa13.05□□□□□ -0.32
LDHB-206ENST00000470985 STRCQ7RTU9 1775 aa13.04□□□□□ -0.32
LDHB-206ENST00000470985 WRNQ14191 1432 aaPredicted RBP eCLIP13.04□□□□□ -0.32
LDHB-206ENST00000470985 ZCCHC11Q5TAX3 1644 aaKnown RBP13.03□□□□□ -0.32
LDHB-206ENST00000470985 TMC2Q8TDI7 906 aa13.03□□□□□ -0.32
LDHB-206ENST00000470985 TNIKQ9UKE5 1360 aa13.03□□□□□ -0.32
LDHB-206ENST00000470985 UACAQ9BZF9 1416 aa13.03□□□□□ -0.32
LDHB-206ENST00000470985 IQSEC2Q5JU85 1478 aa13.03□□□□□ -0.32
LDHB-206ENST00000470985 ZSWIM6Q9HCJ5 1215 aa13.02□□□□□ -0.33
LDHB-206ENST00000470985 WDR7Q9Y4E6 1490 aa13.02□□□□□ -0.33
LDHB-206ENST00000470985 ARAP3Q8WWN8 1544 aa13□□□□□ -0.33
LDHB-206ENST00000470985 HOXB3P14651 431 aaPredicted RBP13□□□□□ -0.33
LDHB-206ENST00000470985 FAM205CA6NFA0 338 aa12.99□□□□□ -0.33
LDHB-206ENST00000470985 HOXB1P14653 301 aaPredicted RBP12.98□□□□□ -0.33
LDHB-206ENST00000470985 TMEM92Q6UXU6 159 aa12.98□□□□□ -0.33
LDHB-206ENST00000470985 CFAP43Q8NDM7 1665 aa12.98□□□□□ -0.33
LDHB-206ENST00000470985 ERBB3P21860 1342 aa12.97□□□□□ -0.33
LDHB-206ENST00000470985 UBAP1LF5GYI3 381 aa12.97□□□□□ -0.33
LDHB-206ENST00000470985 RAPGEF3O95398 923 aa12.96□□□□□ -0.33
LDHB-206ENST00000470985 HSPA1LP34931 641 aa12.95□□□□□ -0.34
LDHB-206ENST00000470985 PTPRTO14522 1441 aa12.93□□□□□ -0.34
LDHB-206ENST00000470985 SRCAPQ6ZRS2 3230 aa12.92□□□□□ -0.34
LDHB-206ENST00000470985 C2orf72A6NCS6 295 aa12.92□□□□□ -0.34
LDHB-206ENST00000470985 PPP1R37O75864 691 aa12.92□□□□□ -0.34
LDHB-206ENST00000470985 FRMPD1Q5SYB0 1578 aa12.92□□□□□ -0.34
LDHB-206ENST00000470985 HS3ST6Q96QI5 342 aa12.92□□□□□ -0.34
LDHB-206ENST00000470985 CARMIL2Q6F5E8 1435 aa12.91□□□□□ -0.34
LDHB-206ENST00000470985 KCNH8Q96L42 1107 aa12.91□□□□□ -0.34
LDHB-206ENST00000470985 PREX1Q8TCU6 1659 aa12.91□□□□□ -0.34
LDHB-206ENST00000470985 ARHGEF40Q8TER5 1519 aa12.89□□□□□ -0.35
LDHB-206ENST00000470985 TTC37Q6PGP7 1564 aa12.89□□□□□ -0.35
LDHB-206ENST00000470985 SIGLEC1Q9BZZ2 1709 aa12.88□□□□□ -0.35
LDHB-206ENST00000470985 ARSIQ5FYB1 569 aa12.86□□□□□ -0.35
LDHB-206ENST00000470985 DISP1Q96F81 1524 aa12.85□□□□□ -0.35
LDHB-206ENST00000470985 KIF3CO14782 793 aa12.85□□□□□ -0.35
LDHB-206ENST00000470985 MLECQ14165 292 aa12.84□□□□□ -0.35
LDHB-206ENST00000470985 GPR153Q6NV75 609 aa12.84□□□□□ -0.35
LDHB-206ENST00000470985 CEBPAP49715 358 aaPredicted RBP12.83□□□□□ -0.36
LDHB-206ENST00000470985 RGS17Q9UGC6 210 aaPredicted RBP12.83□□□□□ -0.36
LDHB-206ENST00000470985 FER1L4A9Z1Z3 1794 aa12.83□□□□□ -0.36
LDHB-206ENST00000470985 BIVM-ERCC5R4GMW8 1640 aa12.83□□□□□ -0.36
LDHB-206ENST00000470985 AMER1Q5JTC6 1135 aaPredicted RBP12.82□□□□□ -0.36
LDHB-206ENST00000470985 VARS2Q5ST30 1063 aaKnown RBP12.82□□□□□ -0.36
LDHB-206ENST00000470985 UHRF1BP1Q6BDS2 1440 aa12.81□□□□□ -0.36
LDHB-206ENST00000470985 FANCAO15360 1455 aa12.81□□□□□ -0.36
LDHB-206ENST00000470985 GPHNQ9NQX3 736 aaPredicted RBP12.81□□□□□ -0.36
LDHB-206ENST00000470985 ZNF335Q9H4Z2 1342 aaPredicted RBP12.81□□□□□ -0.36
LDHB-206ENST00000470985 POGZQ7Z3K3 1410 aa12.8□□□□□ -0.36
LDHB-206ENST00000470985 PIP4K2BP78356 416 aa12.8□□□□□ -0.36
LDHB-206ENST00000470985 NKX1-1Q15270 411 aaPredicted RBP12.8□□□□□ -0.36
LDHB-206ENST00000470985 TBC1D12O60347 775 aa12.79□□□□□ -0.36
LDHB-206ENST00000470985 SLC34A2O95436 690 aa12.79□□□□□ -0.36
LDHB-206ENST00000470985 PHLDB1Q86UU1 1377 aa12.77□□□□□ -0.37
LDHB-206ENST00000470985 FOXK1P85037 733 aa12.76□□□□□ -0.37
LDHB-206ENST00000470985 NCOA1Q15788 1441 aa12.76□□□□□ -0.37
LDHB-206ENST00000470985 IQGAP2Q13576 1575 aa12.76□□□□□ -0.37
LDHB-206ENST00000470985 PDE4AP27815 886 aa12.75□□□□□ -0.37
LDHB-206ENST00000470985 PLPP6Q8IY26 295 aa12.75□□□□□ -0.37
LDHB-206ENST00000470985 PCDHGA4Q9Y5G9 962 aa12.75□□□□□ -0.37
LDHB-206ENST00000470985 POTEB3A0JP26 581 aa12.74□□□□□ -0.37
LDHB-206ENST00000470985 ZNF316A6NFI3 1004 aaPredicted RBP12.74□□□□□ -0.37
LDHB-206ENST00000470985 POTEBQ6S5H4 581 aa12.74□□□□□ -0.37
LDHB-206ENST00000470985 SETD1AO15047 1707 aaKnown RBP12.74□□□□□ -0.37
LDHB-206ENST00000470985 ARHGEF12Q9NZN5 1544 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms