RNA–Protein interactions for RNA: ENST00000469968.5

NVL-212, Transcript of nuclear VCP-like, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NVL, Length 2,510 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NVL-212ENST00000469968 CCNB3Q8WWL7 1395 aa12.1□□□□□ -0.47
NVL-212ENST00000469968 ARID3AQ99856 593 aa12.1□□□□□ -0.47
NVL-212ENST00000469968 POGZQ7Z3K3 1410 aa12.09□□□□□ -0.47
NVL-212ENST00000469968 GPATCH8Q9UKJ3 1502 aaKnown RBP12.09□□□□□ -0.47
NVL-212ENST00000469968 NCOA2Q15596 1464 aa12.09□□□□□ -0.47
NVL-212ENST00000469968 KDM5CP41229 1560 aa12.09□□□□□ -0.47
NVL-212ENST00000469968 ZNF518AQ6AHZ1 1483 aa12.09□□□□□ -0.47
NVL-212ENST00000469968 SAMD9LQ8IVG5 1584 aa12.08□□□□□ -0.48
NVL-212ENST00000469968 COL17A1Q9UMD9 1497 aaPredicted RBP12.08□□□□□ -0.48
NVL-212ENST00000469968 HECW2Q9P2P5 1572 aa12.08□□□□□ -0.48
NVL-212ENST00000469968 MYT1LQ9UL68 1186 aa12.07□□□□□ -0.48
NVL-212ENST00000469968 ZFYVE16Q7Z3T8 1539 aa12.07□□□□□ -0.48
NVL-212ENST00000469968 NEUROD2Q15784 382 aa12.07□□□□□ -0.48
NVL-212ENST00000469968 LMOD2Q6P5Q4 547 aa12.06□□□□□ -0.48
NVL-212ENST00000469968 KIAA1107Q9UPP5 1409 aa12.06□□□□□ -0.48
NVL-212ENST00000469968 EIF5BO60841 1220 aaKnown RBP12.06□□□□□ -0.48
NVL-212ENST00000469968 SCAPERQ9BY12 1400 aa12.05□□□□□ -0.48
NVL-212ENST00000469968 REREQ9P2R6 1566 aa12.04□□□□□ -0.48
NVL-212ENST00000469968 MIA2Q96PC5 1412 aa12.04□□□□□ -0.48
NVL-212ENST00000469968 ARHGEF5Q12774 1597 aa12.03□□□□□ -0.48
NVL-212ENST00000469968 ZNF219Q9P2Y4 722 aaPredicted RBP12.03□□□□□ -0.48
NVL-212ENST00000469968 SYCP2Q9BX26 1530 aa12.03□□□□□ -0.48
NVL-212ENST00000469968 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.03□□□□□ -0.48
NVL-212ENST00000469968 RBM19Q9Y4C8 960 aaKnown RBP12.03□□□□□ -0.48
NVL-212ENST00000469968 C1orf115Q9H7X2 142 aa12.02□□□□□ -0.48
NVL-212ENST00000469968 SALL2Q9Y467 1007 aaPredicted RBP12.02□□□□□ -0.48
NVL-212ENST00000469968 MYOM3Q5VTT5 1437 aa12.02□□□□□ -0.49
NVL-212ENST00000469968 MLH3Q9UHC1 1453 aa12.02□□□□□ -0.49
NVL-212ENST00000469968 INO80Q9ULG1 1556 aaPredicted RBP12.01□□□□□ -0.49
NVL-212ENST00000469968 ERICH6BQ5W0A0 696 aa12.01□□□□□ -0.49
NVL-212ENST00000469968 CAMSAP2Q08AD1 1489 aa12.01□□□□□ -0.49
NVL-212ENST00000469968 CFDP1Q9UEE9 299 aaPredicted RBP12.01□□□□□ -0.49
NVL-212ENST00000469968 NKX1-1Q15270 411 aaPredicted RBP12□□□□□ -0.49
NVL-212ENST00000469968 ZMYND15Q9H091 742 aa12□□□□□ -0.49
NVL-212ENST00000469968 CCDC9Q9Y3X0 531 aaKnown RBP12□□□□□ -0.49
NVL-212ENST00000469968 ADGBQ8N7X0 1667 aa12□□□□□ -0.49
NVL-212ENST00000469968 HS6ST3Q8IZP7 471 aa11.99□□□□□ -0.49
NVL-212ENST00000469968 C9orf84Q5VXU9 1444 aa11.99□□□□□ -0.49
NVL-212ENST00000469968 DIP2CQ9Y2E4 1556 aa11.99□□□□□ -0.49
NVL-212ENST00000469968 MAST1Q9Y2H9 1570 aa11.99□□□□□ -0.49
NVL-212ENST00000469968 CROCC2H7BZ55 1655 aa11.99□□□□□ -0.49
NVL-212ENST00000469968 CCDC141Q6ZP82 1450 aa11.98□□□□□ -0.49
NVL-212ENST00000469968 ABCA6Q8N139 1617 aa11.98□□□□□ -0.49
NVL-212ENST00000469968 PTPN23Q9H3S7 1636 aa11.98□□□□□ -0.49
NVL-212ENST00000469968 KIDINS220Q9ULH0 1771 aa11.98□□□□□ -0.49
NVL-212ENST00000469968 RSPH4AQ5TD94 716 aa11.98□□□□□ -0.49
NVL-212ENST00000469968 ATP7AQ04656 1500 aa11.98□□□□□ -0.49
NVL-212ENST00000469968 ARHGEF12Q9NZN5 1544 aa11.98□□□□□ -0.49
NVL-212ENST00000469968 BCORL1Q5H9F3 1711 aa11.97□□□□□ -0.49
NVL-212ENST00000469968 TCOF1Q13428 1488 aaKnown RBP11.97□□□□□ -0.49
NVL-212ENST00000469968 DEKP35659 375 aaKnown RBP11.97□□□□□ -0.49
NVL-212ENST00000469968 ATP10AO60312 1499 aa11.97□□□□□ -0.49
NVL-212ENST00000469968 SAMD1Q6SPF0 538 aaPredicted RBP11.97□□□□□ -0.49
NVL-212ENST00000469968 RSPH6AQ9H0K4 717 aa11.97□□□□□ -0.49
NVL-212ENST00000469968 RTEL1-TNFRSF6BF6WH68 1400 aa11.96□□□□□ -0.49
NVL-212ENST00000469968 DMRT2Q9Y5R5 561 aa11.96□□□□□ -0.49
NVL-212ENST00000469968 TRAPPC8Q9Y2L5 1435 aa11.96□□□□□ -0.49
NVL-212ENST00000469968 MSH5O43196 834 aa11.96□□□□□ -0.5
NVL-212ENST00000469968 RAPGEF3O95398 923 aa11.96□□□□□ -0.5
NVL-212ENST00000469968 AGLP35573 1532 aa11.96□□□□□ -0.5
NVL-212ENST00000469968 NECTIN2Q92692 538 aa11.95□□□□□ -0.5
NVL-212ENST00000469968 CCDC136Q96JN2 1154 aa11.95□□□□□ -0.5
NVL-212ENST00000469968 MBD5Q9P267 1494 aa11.95□□□□□ -0.5
NVL-212ENST00000469968 SHANK2Q9UPX8 1470 aa11.95□□□□□ -0.5
NVL-212ENST00000469968 ADAMTSL3P82987 1691 aa11.94□□□□□ -0.5
NVL-212ENST00000469968 KANK4Q5T7N3 995 aaPredicted RBP11.94□□□□□ -0.5
NVL-212ENST00000469968 PLXNC1O60486 1568 aa11.94□□□□□ -0.5
NVL-212ENST00000469968 DNMT1P26358 1616 aaKnown RBP11.94□□□□□ -0.5
NVL-212ENST00000469968 ZNF777Q9ULD5 760 aaPredicted RBP11.94□□□□□ -0.5
NVL-212ENST00000469968 FGD6Q6ZV73 1430 aa11.94□□□□□ -0.5
NVL-212ENST00000469968 YEATS2Q9ULM3 1422 aa11.93□□□□□ -0.5
NVL-212ENST00000469968 GTPBP6O43824 516 aaPredicted RBP11.93□□□□□ -0.5
NVL-212ENST00000469968 SPAG9O60271 1321 aaKnown RBP11.92□□□□□ -0.5
NVL-212ENST00000469968 FAM135AQ9P2D6 1515 aa11.92□□□□□ -0.5
NVL-212ENST00000469968 FER1L4A9Z1Z3 1794 aa11.91□□□□□ -0.5
NVL-212ENST00000469968 EIF2AK4Q9P2K8 1649 aaKnown RBP11.91□□□□□ -0.5
NVL-212ENST00000469968 SLC24A3Q9HC58 644 aa11.9□□□□□ -0.5
NVL-212ENST00000469968 A2MP01023 1474 aa11.89□□□□□ -0.51
NVL-212ENST00000469968 SIGLEC1Q9BZZ2 1709 aa11.88□□□□□ -0.51
NVL-212ENST00000469968 ZBTB7CA1YPR0 619 aa11.88□□□□□ -0.51
NVL-212ENST00000469968 AFAP1Q8N556 730 aa11.88□□□□□ -0.51
NVL-212ENST00000469968 MROH2AA6NES4 1674 aa11.88□□□□□ -0.51
NVL-212ENST00000469968 HNRNPMP52272 730 aaKnown RBP eCLIP11.88□□□□□ -0.51
NVL-212ENST00000469968 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.87□□□□□ -0.51
NVL-212ENST00000469968 MADDQ8WXG6 1647 aa11.87□□□□□ -0.51
NVL-212ENST00000469968 RIMS1Q86UR5 1692 aaKnown RBP11.87□□□□□ -0.51
NVL-212ENST00000469968 DAPK1P53355 1430 aa11.86□□□□□ -0.51
NVL-212ENST00000469968 FANCIQ9NVI1 1328 aa11.86□□□□□ -0.51
NVL-212ENST00000469968 TSPY4P0CV99 314 aa11.85□□□□□ -0.51
NVL-212ENST00000469968 TSPY10P0CW01 314 aa11.85□□□□□ -0.51
NVL-212ENST00000469968 DUOX2Q9NRD8 1548 aa11.85□□□□□ -0.51
NVL-212ENST00000469968 ZC3H13Q5T200 1668 aaKnown RBP11.85□□□□□ -0.51
NVL-212ENST00000469968 ZC3H15Q8WU90 426 aaKnown RBP11.85□□□□□ -0.51
NVL-212ENST00000469968 ZNF644Q9H582 1327 aaPredicted RBP11.85□□□□□ -0.51
NVL-212ENST00000469968 CNTLNQ9NXG0 1405 aa11.85□□□□□ -0.51
NVL-212ENST00000469968 CIZ1Q9ULV3 898 aaPredicted RBP11.85□□□□□ -0.51
NVL-212ENST00000469968 RNF17Q9BXT8 1623 aaKnown RBP11.84□□□□□ -0.51
NVL-212ENST00000469968 ADGRL2O95490 1459 aa11.84□□□□□ -0.51
NVL-212ENST00000469968 ARID4BQ4LE39 1312 aaPredicted RBP11.84□□□□□ -0.51
NVL-212ENST00000469968 PKNOX2Q96KN3 472 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms