RNA–Protein interactions for RNA: ENST00000469930.1

BRAF-202, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

TSL 2

Gene BRAF, Length 1,058 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-202ENST00000469930 KIF3BO15066 747 aa30.98■■■□□ 2.55
BRAF-202ENST00000469930 AEBP2Q6ZN18 517 aaPredicted RBP30.96■■■□□ 2.55
BRAF-202ENST00000469930 PPP6R1Q9UPN7 881 aa30.96■■■□□ 2.55
BRAF-202ENST00000469930 SIGLEC1Q9BZZ2 1709 aa30.95■■■□□ 2.55
BRAF-202ENST00000469930 KDM5DQ9BY66 1539 aa30.93■■■□□ 2.54
BRAF-202ENST00000469930 PRDM15P57071 1507 aaPredicted RBP30.93■■■□□ 2.54
BRAF-202ENST00000469930 MROH1Q8NDA8 1641 aa30.91■■■□□ 2.54
BRAF-202ENST00000469930 FAM135AQ9P2D6 1515 aa30.91■■■□□ 2.54
BRAF-202ENST00000469930 VWDEQ8N2E2 1590 aa30.9■■■□□ 2.54
BRAF-202ENST00000469930 NUP155O75694 1391 aa30.85■■■□□ 2.53
BRAF-202ENST00000469930 KANK1Q14678 1352 aa30.85■■■□□ 2.53
BRAF-202ENST00000469930 IQGAP3Q86VI3 1631 aa30.84■■■□□ 2.53
BRAF-202ENST00000469930 LMTK2Q8IWU2 1503 aa30.83■■■□□ 2.53
BRAF-202ENST00000469930 GGT6Q6P531 493 aa30.82■■■□□ 2.52
BRAF-202ENST00000469930 TRIM52Q96A61 297 aa30.82■■■□□ 2.52
BRAF-202ENST00000469930 ARID4BQ4LE39 1312 aaPredicted RBP30.81■■■□□ 2.52
BRAF-202ENST00000469930 PZPP20742 1482 aa30.8■■■□□ 2.52
BRAF-202ENST00000469930 ZC3H13Q5T200 1668 aaKnown RBP30.79■■■□□ 2.52
BRAF-202ENST00000469930 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.78■■■□□ 2.52
BRAF-202ENST00000469930 ABCC3O15438 1527 aa30.75■■■□□ 2.51
BRAF-202ENST00000469930 MPHOSPH9Q99550 1183 aa30.75■■■□□ 2.51
BRAF-202ENST00000469930 WASHC2CQ9Y4E1 1318 aa30.73■■■□□ 2.51
BRAF-202ENST00000469930 CNTLNQ9NXG0 1405 aa30.73■■■□□ 2.51
BRAF-202ENST00000469930 TET3O43151 1660 aa30.72■■■□□ 2.51
BRAF-202ENST00000469930 SLC4A1APQ9BWU0 796 aaKnown RBP30.71■■■□□ 2.51
BRAF-202ENST00000469930 DHX57Q6P158 1386 aaKnown RBP30.7■■■□□ 2.51
BRAF-202ENST00000469930 ARHGAP31Q2M1Z3 1444 aa30.7■■■□□ 2.5
BRAF-202ENST00000469930 MLECQ14165 292 aa30.69■■■□□ 2.5
BRAF-202ENST00000469930 ADAMTSL3P82987 1691 aa30.68■■■□□ 2.5
BRAF-202ENST00000469930 CEP152O94986 1710 aa30.67■■■□□ 2.5
BRAF-202ENST00000469930 RPRD2Q5VT52 1461 aaKnown RBP30.66■■■□□ 2.5
BRAF-202ENST00000469930 EFCAB6Q5THR3 1501 aa30.66■■■□□ 2.5
BRAF-202ENST00000469930 MROH2AA6NES4 1674 aa30.65■■■□□ 2.5
BRAF-202ENST00000469930 CAMSAP1Q5T5Y3 1602 aa30.64■■■□□ 2.5
BRAF-202ENST00000469930 ESF1Q9H501 851 aaKnown RBP30.63■■■□□ 2.49
BRAF-202ENST00000469930 PKD2Q13563 968 aa30.62■■■□□ 2.49
BRAF-202ENST00000469930 CLTCQ00610 1675 aaKnown RBP30.62■■■□□ 2.49
BRAF-202ENST00000469930 FER1L4A9Z1Z3 1794 aa30.6■■■□□ 2.49
BRAF-202ENST00000469930 E9PCH4 1651 aa30.59■■■□□ 2.49
BRAF-202ENST00000469930 ZMYM3Q14202 1370 aa30.58■■■□□ 2.49
BRAF-202ENST00000469930 CLSPNQ9HAW4 1339 aa30.58■■■□□ 2.49
BRAF-202ENST00000469930 NPATQ14207 1427 aa30.57■■■□□ 2.48
BRAF-202ENST00000469930 MADDQ8WXG6 1647 aa30.55■■■□□ 2.48
BRAF-202ENST00000469930 PTPRTO14522 1441 aa30.55■■■□□ 2.48
BRAF-202ENST00000469930 ANKRD30BQ9BXX2 1392 aa30.52■■■□□ 2.48
BRAF-202ENST00000469930 NOS1P29475 1434 aa30.5■■■□□ 2.47
BRAF-202ENST00000469930 PLA2R1Q13018 1463 aa30.47■■■□□ 2.47
BRAF-202ENST00000469930 RIMS1Q86UR5 1692 aaKnown RBP30.46■■■□□ 2.47
BRAF-202ENST00000469930 SPATA31D1Q6ZQQ2 1576 aa30.46■■■□□ 2.47
BRAF-202ENST00000469930 C3P01024 1663 aa30.46■■■□□ 2.47
BRAF-202ENST00000469930 FOXD1Q16676 465 aa30.45■■■□□ 2.47
BRAF-202ENST00000469930 CCER1Q8TC90 406 aaPredicted RBP30.45■■■□□ 2.47
BRAF-202ENST00000469930 SPHKAPQ2M3C7 1700 aa30.44■■■□□ 2.46
BRAF-202ENST00000469930 ERVK-7P63135 1459 aa30.44■■■□□ 2.46
BRAF-202ENST00000469930 TRPM2O94759 1503 aa30.44■■■□□ 2.46
BRAF-202ENST00000469930 PREX1Q8TCU6 1659 aa30.44■■■□□ 2.46
BRAF-202ENST00000469930 KDM4FA0A1W2PPD8 638 aa30.41■■■□□ 2.46
BRAF-202ENST00000469930 PTPRMP28827 1452 aa30.39■■■□□ 2.46
BRAF-202ENST00000469930 FBXO31Q5XUX0 539 aaPredicted RBP30.38■■■□□ 2.45
BRAF-202ENST00000469930 SLC52A1Q9NWF4 448 aa30.37■■■□□ 2.45
BRAF-202ENST00000469930 SYNMO15061 1565 aa30.36■■■□□ 2.45
BRAF-202ENST00000469930 PIK3C2BO00750 1634 aa30.34■■■□□ 2.45
BRAF-202ENST00000469930 CEBPAP49715 358 aaPredicted RBP30.34■■■□□ 2.45
BRAF-202ENST00000469930 CCDC144AA2RUR9 1427 aa30.33■■■□□ 2.45
BRAF-202ENST00000469930 CFAP65Q6ZU64 1925 aaKnown RBP30.32■■■□□ 2.44
BRAF-202ENST00000469930 TNRQ92752 1358 aa30.32■■■□□ 2.44
BRAF-202ENST00000469930 NEURL4Q96JN8 1562 aa30.29■■■□□ 2.44
BRAF-202ENST00000469930 CLTCL1P53675 1640 aa30.28■■■□□ 2.44
BRAF-202ENST00000469930 NLRP1Q9C000 1473 aa30.27■■■□□ 2.44
BRAF-202ENST00000469930 SETD1BQ9UPS6 1966 aaKnown RBP30.26■■■□□ 2.44
BRAF-202ENST00000469930 IDI1Q13907 227 aa30.26■■■□□ 2.43
BRAF-202ENST00000469930 SIN3AQ96ST3 1273 aa30.24■■■□□ 2.43
BRAF-202ENST00000469930 TIMELESSQ9UNS1 1208 aa30.23■■■□□ 2.43
BRAF-202ENST00000469930 UGGT1Q9NYU2 1555 aa30.22■■■□□ 2.43
BRAF-202ENST00000469930 KDM5AP29375 1690 aaKnown RBP30.22■■■□□ 2.43
BRAF-202ENST00000469930 SPATA31E1Q6ZUB1 1445 aa30.21■■■□□ 2.43
BRAF-202ENST00000469930 KIF1BO60333 1816 aa30.18■■■□□ 2.42
BRAF-202ENST00000469930 ADGRB3O60242 1522 aa30.17■■■□□ 2.42
BRAF-202ENST00000469930 TMEM131LA2VDJ0 1609 aa30.15■■■□□ 2.42
BRAF-202ENST00000469930 MYO3AQ8NEV4 1616 aa30.15■■■□□ 2.42
BRAF-202ENST00000469930 A2ML1A8K2U0 1454 aa30.15■■■□□ 2.42
BRAF-202ENST00000469930 NEUROD1Q13562 356 aa30.14■■■□□ 2.42
BRAF-202ENST00000469930 ZNF142P52746 1687 aaPredicted RBP30.11■■■□□ 2.41
BRAF-202ENST00000469930 PLPPR3Q6T4P5 718 aa30.11■■■□□ 2.41
BRAF-202ENST00000469930 STAC3Q96MF2 364 aa30.11■■■□□ 2.41
BRAF-202ENST00000469930 RPGRIP1LQ68CZ1 1315 aa30.1■■■□□ 2.41
BRAF-202ENST00000469930 UHRF1BP1Q6BDS2 1440 aa30.09■■■□□ 2.41
BRAF-202ENST00000469930 CEP170BQ9Y4F5 1589 aaPredicted RBP30.09■■■□□ 2.41
BRAF-202ENST00000469930 UBR1Q8IWV7 1749 aa30.08■■■□□ 2.41
BRAF-202ENST00000469930 TONSLQ96HA7 1378 aa30.06■■■□□ 2.4
BRAF-202ENST00000469930 THEMISQ8N1K5 641 aaPredicted RBP30.04■■■□□ 2.4
BRAF-202ENST00000469930 STAG3Q9UJ98 1225 aa30.04■■■□□ 2.4
BRAF-202ENST00000469930 CHGAP10645 457 aaKnown RBP30.02■■■□□ 2.4
BRAF-202ENST00000469930 ZEB1P37275 1124 aaPredicted RBP30.02■■■□□ 2.4
BRAF-202ENST00000469930 L3MBTL2Q969R5 705 aa30.02■■■□□ 2.4
BRAF-202ENST00000469930 RGL3Q3MIN7 710 aa30■■■□□ 2.39
BRAF-202ENST00000469930 MYO5BQ9ULV0 1848 aa30■■■□□ 2.39
BRAF-202ENST00000469930 SLIT1O75093 1534 aa30■■■□□ 2.39
BRAF-202ENST00000469930 ARHGAP23Q9P227 1491 aa29.99■■■□□ 2.39
BRAF-202ENST00000469930 ZFYVE9O95405 1425 aa29.99■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms