RNA–Protein interactions for RNA: ENST00000469217.5

PCCB-209, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PCCB, Length 1,841 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-209ENST00000469217 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.84■■□□□ 1.73
PCCB-209ENST00000469217 ARID4BQ4LE39 1312 aaPredicted RBP25.84■■□□□ 1.73
PCCB-209ENST00000469217 UNC13BO14795 1591 aa25.83■■□□□ 1.73
PCCB-209ENST00000469217 DEPDC5O75140 1603 aa25.83■■□□□ 1.73
PCCB-209ENST00000469217 RNF17Q9BXT8 1623 aaKnown RBP25.83■■□□□ 1.73
PCCB-209ENST00000469217 MROH1Q8NDA8 1641 aa25.82■■□□□ 1.72
PCCB-209ENST00000469217 NUP155O75694 1391 aa25.81■■□□□ 1.72
PCCB-209ENST00000469217 ACIN1Q9UKV3 1341 aaKnown RBP25.8■■□□□ 1.72
PCCB-209ENST00000469217 PRDM15P57071 1507 aaPredicted RBP25.79■■□□□ 1.72
PCCB-209ENST00000469217 MLECQ14165 292 aa25.78■■□□□ 1.72
PCCB-209ENST00000469217 KDM5DQ9BY66 1539 aa25.76■■□□□ 1.71
PCCB-209ENST00000469217 VWDEQ8N2E2 1590 aa25.74■■□□□ 1.71
PCCB-209ENST00000469217 PZPP20742 1482 aa25.74■■□□□ 1.71
PCCB-209ENST00000469217 KANK1Q14678 1352 aa25.74■■□□□ 1.71
PCCB-209ENST00000469217 IQGAP3Q86VI3 1631 aa25.73■■□□□ 1.71
PCCB-209ENST00000469217 FAM135AQ9P2D6 1515 aa25.73■■□□□ 1.71
PCCB-209ENST00000469217 MPHOSPH9Q99550 1183 aa25.72■■□□□ 1.71
PCCB-209ENST00000469217 SLC4A1APQ9BWU0 796 aaKnown RBP25.71■■□□□ 1.71
PCCB-209ENST00000469217 WASHC2CQ9Y4E1 1318 aa25.7■■□□□ 1.7
PCCB-209ENST00000469217 DHX57Q6P158 1386 aaKnown RBP25.69■■□□□ 1.7
PCCB-209ENST00000469217 PPP6R1Q9UPN7 881 aa25.69■■□□□ 1.7
PCCB-209ENST00000469217 ABCC3O15438 1527 aa25.68■■□□□ 1.7
PCCB-209ENST00000469217 CEP152O94986 1710 aa25.67■■□□□ 1.7
PCCB-209ENST00000469217 LMTK2Q8IWU2 1503 aa25.65■■□□□ 1.7
PCCB-209ENST00000469217 ZC3H13Q5T200 1668 aaKnown RBP25.64■■□□□ 1.7
PCCB-209ENST00000469217 PKD2Q13563 968 aa25.63■■□□□ 1.69
PCCB-209ENST00000469217 TET3O43151 1660 aa25.63■■□□□ 1.69
PCCB-209ENST00000469217 CLTCQ00610 1675 aaKnown RBP25.62■■□□□ 1.69
PCCB-209ENST00000469217 FOXD1Q16676 465 aa25.61■■□□□ 1.69
PCCB-209ENST00000469217 ESF1Q9H501 851 aaKnown RBP25.61■■□□□ 1.69
PCCB-209ENST00000469217 EFCAB6Q5THR3 1501 aa25.6■■□□□ 1.69
PCCB-209ENST00000469217 CAMSAP1Q5T5Y3 1602 aa25.59■■□□□ 1.69
PCCB-209ENST00000469217 E9PCH4 1651 aa25.57■■□□□ 1.68
PCCB-209ENST00000469217 FER1L4A9Z1Z3 1794 aa25.57■■□□□ 1.68
PCCB-209ENST00000469217 CCER1Q8TC90 406 aaPredicted RBP25.57■■□□□ 1.68
PCCB-209ENST00000469217 ADAMTSL3P82987 1691 aa25.57■■□□□ 1.68
PCCB-209ENST00000469217 CNTLNQ9NXG0 1405 aa25.56■■□□□ 1.68
PCCB-209ENST00000469217 MADDQ8WXG6 1647 aa25.56■■□□□ 1.68
PCCB-209ENST00000469217 NPATQ14207 1427 aa25.55■■□□□ 1.68
PCCB-209ENST00000469217 ZMYM3Q14202 1370 aa25.54■■□□□ 1.68
PCCB-209ENST00000469217 ARHGAP31Q2M1Z3 1444 aa25.53■■□□□ 1.68
PCCB-209ENST00000469217 RPRD2Q5VT52 1461 aaKnown RBP25.51■■□□□ 1.68
PCCB-209ENST00000469217 MROH2AA6NES4 1674 aa25.51■■□□□ 1.67
PCCB-209ENST00000469217 RIMS1Q86UR5 1692 aaKnown RBP25.49■■□□□ 1.67
PCCB-209ENST00000469217 ANKRD30BQ9BXX2 1392 aa25.48■■□□□ 1.67
PCCB-209ENST00000469217 CFAP65Q6ZU64 1925 aaKnown RBP25.47■■□□□ 1.67
PCCB-209ENST00000469217 FBXO31Q5XUX0 539 aaPredicted RBP25.47■■□□□ 1.67
PCCB-209ENST00000469217 PLA2R1Q13018 1463 aa25.46■■□□□ 1.67
PCCB-209ENST00000469217 CEBPAP49715 358 aaPredicted RBP25.45■■□□□ 1.66
PCCB-209ENST00000469217 PTPRTO14522 1441 aa25.45■■□□□ 1.66
PCCB-209ENST00000469217 C3P01024 1663 aa25.45■■□□□ 1.66
PCCB-209ENST00000469217 CLSPNQ9HAW4 1339 aa25.43■■□□□ 1.66
PCCB-209ENST00000469217 SPHKAPQ2M3C7 1700 aa25.43■■□□□ 1.66
PCCB-209ENST00000469217 PREX1Q8TCU6 1659 aa25.43■■□□□ 1.66
PCCB-209ENST00000469217 NOS1P29475 1434 aa25.42■■□□□ 1.66
PCCB-209ENST00000469217 KDM4FA0A1W2PPD8 638 aa25.42■■□□□ 1.66
PCCB-209ENST00000469217 ERVK-7P63135 1459 aa25.41■■□□□ 1.66
PCCB-209ENST00000469217 PLPPR3Q6T4P5 718 aa25.41■■□□□ 1.66
PCCB-209ENST00000469217 TRPM2O94759 1503 aa25.4■■□□□ 1.66
PCCB-209ENST00000469217 SIN3AQ96ST3 1273 aa25.4■■□□□ 1.66
PCCB-209ENST00000469217 SPATA31D1Q6ZQQ2 1576 aa25.39■■□□□ 1.66
PCCB-209ENST00000469217 PTPRMP28827 1452 aa25.38■■□□□ 1.65
PCCB-209ENST00000469217 SYNMO15061 1565 aa25.38■■□□□ 1.65
PCCB-209ENST00000469217 CCDC144AA2RUR9 1427 aa25.36■■□□□ 1.65
PCCB-209ENST00000469217 UGGT1Q9NYU2 1555 aa25.35■■□□□ 1.65
PCCB-209ENST00000469217 NEUROD1Q13562 356 aa25.33■■□□□ 1.65
PCCB-209ENST00000469217 CLTCL1P53675 1640 aa25.33■■□□□ 1.65
PCCB-209ENST00000469217 TNRQ92752 1358 aa25.32■■□□□ 1.64
PCCB-209ENST00000469217 PIK3C2BO00750 1634 aa25.3■■□□□ 1.64
PCCB-209ENST00000469217 IDI1Q13907 227 aa25.3■■□□□ 1.64
PCCB-209ENST00000469217 SLC52A1Q9NWF4 448 aa25.3■■□□□ 1.64
PCCB-209ENST00000469217 NLRP1Q9C000 1473 aa25.21■■□□□ 1.63
PCCB-209ENST00000469217 KIF1BO60333 1816 aa25.21■■□□□ 1.63
PCCB-209ENST00000469217 CHGAP10645 457 aaKnown RBP25.21■■□□□ 1.63
PCCB-209ENST00000469217 SPATA31E1Q6ZUB1 1445 aa25.2■■□□□ 1.63
PCCB-209ENST00000469217 MYO3AQ8NEV4 1616 aa25.2■■□□□ 1.62
PCCB-209ENST00000469217 RGL3Q3MIN7 710 aa25.19■■□□□ 1.62
PCCB-209ENST00000469217 SETD1BQ9UPS6 1966 aaKnown RBP25.18■■□□□ 1.62
PCCB-209ENST00000469217 ADGRB3O60242 1522 aa25.17■■□□□ 1.62
PCCB-209ENST00000469217 TMEM131LA2VDJ0 1609 aa25.17■■□□□ 1.62
PCCB-209ENST00000469217 TONSLQ96HA7 1378 aa25.17■■□□□ 1.62
PCCB-209ENST00000469217 STAG3Q9UJ98 1225 aa25.16■■□□□ 1.62
PCCB-209ENST00000469217 NEURL4Q96JN8 1562 aa25.15■■□□□ 1.62
PCCB-209ENST00000469217 L3MBTL2Q969R5 705 aa25.14■■□□□ 1.61
PCCB-209ENST00000469217 A2ML1A8K2U0 1454 aa25.13■■□□□ 1.61
PCCB-209ENST00000469217 MYO5BQ9ULV0 1848 aa25.13■■□□□ 1.61
PCCB-209ENST00000469217 UBR1Q8IWV7 1749 aa25.13■■□□□ 1.61
PCCB-209ENST00000469217 TIMELESSQ9UNS1 1208 aa25.12■■□□□ 1.61
PCCB-209ENST00000469217 CEP170BQ9Y4F5 1589 aaPredicted RBP25.12■■□□□ 1.61
PCCB-209ENST00000469217 ZNF326Q5BKZ1 582 aaKnown RBP25.12■■□□□ 1.61
PCCB-209ENST00000469217 KDM5AP29375 1690 aaKnown RBP25.11■■□□□ 1.61
PCCB-209ENST00000469217 UHRF1BP1Q6BDS2 1440 aa25.11■■□□□ 1.61
PCCB-209ENST00000469217 ZNF142P52746 1687 aaPredicted RBP25.09■■□□□ 1.61
PCCB-209ENST00000469217 DCAF11Q8TEB1 546 aa25.08■■□□□ 1.61
PCCB-209ENST00000469217 THEMISQ8N1K5 641 aaPredicted RBP25.05■■□□□ 1.6
PCCB-209ENST00000469217 KDM2AQ9Y2K7 1162 aa25.05■■□□□ 1.6
PCCB-209ENST00000469217 RPGRIP1LQ68CZ1 1315 aa25.04■■□□□ 1.6
PCCB-209ENST00000469217 ZEB1P37275 1124 aaPredicted RBP25.04■■□□□ 1.6
PCCB-209ENST00000469217 NEXMIFQ5QGS0 1516 aa25.03■■□□□ 1.6
PCCB-209ENST00000469217 TMEM2Q9UHN6 1383 aa25.03■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms