RNA–Protein interactions for RNA: ENST00000468468.5

TSPAN4-211, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,777 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-211ENST00000468468 KDM5DQ9BY66 1539 aa21.5■■□□□ 1.03
TSPAN4-211ENST00000468468 KDM5CP41229 1560 aa21.48■■□□□ 1.03
TSPAN4-211ENST00000468468 EFCAB2Q5VUJ9 269 aa21.48■■□□□ 1.03
TSPAN4-211ENST00000468468 PLEKHH2Q8IVE3 1493 aa21.47■■□□□ 1.03
TSPAN4-211ENST00000468468 ARID4BQ4LE39 1312 aaPredicted RBP21.47■■□□□ 1.03
TSPAN4-211ENST00000468468 MAST1Q9Y2H9 1570 aa21.46■■□□□ 1.03
TSPAN4-211ENST00000468468 MSH5O43196 834 aa21.46■■□□□ 1.03
TSPAN4-211ENST00000468468 FANCIQ9NVI1 1328 aa21.46■■□□□ 1.03
TSPAN4-211ENST00000468468 UHRF1BP1Q6BDS2 1440 aa21.46■■□□□ 1.03
TSPAN4-211ENST00000468468 B4GALNT3Q6L9W6 998 aa21.45■■□□□ 1.02
TSPAN4-211ENST00000468468 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.44■■□□□ 1.02
TSPAN4-211ENST00000468468 CARD11Q9BXL7 1154 aa21.44■■□□□ 1.02
TSPAN4-211ENST00000468468 RALGAPBQ86X10 1494 aa21.43■■□□□ 1.02
TSPAN4-211ENST00000468468 FAM135AQ9P2D6 1515 aa21.43■■□□□ 1.02
TSPAN4-211ENST00000468468 TRAPPC8Q9Y2L5 1435 aa21.42■■□□□ 1.02
TSPAN4-211ENST00000468468 SMG6Q86US8 1419 aaKnown RBP21.41■■□□□ 1.02
TSPAN4-211ENST00000468468 KDM2AQ9Y2K7 1162 aa21.41■■□□□ 1.02
TSPAN4-211ENST00000468468 ABCC1P33527 1531 aa21.41■■□□□ 1.02
TSPAN4-211ENST00000468468 ROCK2O75116 1388 aaKnown RBP21.4■■□□□ 1.02
TSPAN4-211ENST00000468468 WDR7Q9Y4E6 1490 aa21.4■■□□□ 1.02
TSPAN4-211ENST00000468468 PLXNC1O60486 1568 aa21.4■■□□□ 1.02
TSPAN4-211ENST00000468468 OSCARQ8IYS5 282 aa21.4■■□□□ 1.02
TSPAN4-211ENST00000468468 NUDCQ9Y266 331 aa21.38■■□□□ 1.01
TSPAN4-211ENST00000468468 AFAP1Q8N556 730 aa21.37■■□□□ 1.01
TSPAN4-211ENST00000468468 DCAF11Q8TEB1 546 aa21.36■■□□□ 1.01
TSPAN4-211ENST00000468468 TMC1Q8TDI8 760 aa21.36■■□□□ 1.01
TSPAN4-211ENST00000468468 UNC13BO14795 1591 aa21.36■■□□□ 1.01
TSPAN4-211ENST00000468468 ST20-MTHFSA0A0A6YYL1 179 aa21.36■■□□□ 1.01
TSPAN4-211ENST00000468468 PNISRQ8TF01 805 aaKnown RBP21.36■■□□□ 1.01
TSPAN4-211ENST00000468468 DUOX2Q9NRD8 1548 aa21.35■■□□□ 1.01
TSPAN4-211ENST00000468468 ASXL2Q76L83 1435 aa21.32■■□□□ 1
TSPAN4-211ENST00000468468 SPAG9O60271 1321 aaKnown RBP21.32■■□□□ 1
TSPAN4-211ENST00000468468 SENP3-EIF4A1A0A087X0R7 540 aa21.32■■□□□ 1
TSPAN4-211ENST00000468468 ARAP3Q8WWN8 1544 aa21.3■■□□□ 1
TSPAN4-211ENST00000468468 ERBINQ96RT1 1412 aa21.3■■□□□ 1
TSPAN4-211ENST00000468468 FANCAO15360 1455 aa21.3■■□□□ 1
TSPAN4-211ENST00000468468 SLC24A1O60721 1099 aa21.3■■□□□ 1
TSPAN4-211ENST00000468468 ERICH6Q7L0X2 663 aa21.3■■□□□ 1
TSPAN4-211ENST00000468468 RNF123Q5XPI4 1314 aa21.29■■□□□ 1
TSPAN4-211ENST00000468468 PLA2R1Q13018 1463 aa21.29■■□□□ 1
TSPAN4-211ENST00000468468 CCDC144AA2RUR9 1427 aa21.28■■□□□ 1
TSPAN4-211ENST00000468468 IQGAP3Q86VI3 1631 aa21.28■■□□□ 1
TSPAN4-211ENST00000468468 ABCA9Q8IUA7 1624 aa21.28■■□□□ 1
TSPAN4-211ENST00000468468 MYBBP1AQ9BQG0 1328 aaKnown RBP21.26■□□□□ 0.99
TSPAN4-211ENST00000468468 RALBP1Q15311 655 aa21.26■□□□□ 0.99
TSPAN4-211ENST00000468468 RGL3Q3MIN7 710 aa21.26■□□□□ 0.99
TSPAN4-211ENST00000468468 ZFYVE16Q7Z3T8 1539 aa21.25■□□□□ 0.99
TSPAN4-211ENST00000468468 MAGI2Q86UL8 1455 aa21.25■□□□□ 0.99
TSPAN4-211ENST00000468468 BRD4O60885 1362 aaPredicted RBP21.25■□□□□ 0.99
TSPAN4-211ENST00000468468 KTN1Q86UP2 1357 aaKnown RBP21.24■□□□□ 0.99
TSPAN4-211ENST00000468468 NPM1P06748 294 aaKnown RBP eCLIP21.24■□□□□ 0.99
TSPAN4-211ENST00000468468 LRPPRCP42704 1394 aaKnown RBP21.23■□□□□ 0.99
TSPAN4-211ENST00000468468 RTEL1-TNFRSF6BF6WH68 1400 aa21.23■□□□□ 0.99
TSPAN4-211ENST00000468468 CCDC136Q96JN2 1154 aa21.23■□□□□ 0.99
TSPAN4-211ENST00000468468 SCAPERQ9BY12 1400 aa21.22■□□□□ 0.99
TSPAN4-211ENST00000468468 MYT1LQ9UL68 1186 aa21.22■□□□□ 0.99
TSPAN4-211ENST00000468468 ADGRL1O94910 1474 aa21.22■□□□□ 0.99
TSPAN4-211ENST00000468468 E9PCH4 1651 aa21.2■□□□□ 0.98
TSPAN4-211ENST00000468468 PRAG1Q86YV5 1406 aa21.2■□□□□ 0.98
TSPAN4-211ENST00000468468 ATP7AQ04656 1500 aa21.18■□□□□ 0.98
TSPAN4-211ENST00000468468 TRPM1Q7Z4N2 1603 aa21.18■□□□□ 0.98
TSPAN4-211ENST00000468468 NBPF1Q3BBV0 1214 aa21.17■□□□□ 0.98
TSPAN4-211ENST00000468468 INO80Q9ULG1 1556 aaPredicted RBP21.16■□□□□ 0.98
TSPAN4-211ENST00000468468 A2MP01023 1474 aa21.16■□□□□ 0.98
TSPAN4-211ENST00000468468 ANO8Q9HCE9 1232 aaPredicted RBP21.14■□□□□ 0.98
TSPAN4-211ENST00000468468 NLRP13Q86W25 1043 aa21.14■□□□□ 0.97
TSPAN4-211ENST00000468468 ATP10AO60312 1499 aa21.13■□□□□ 0.97
TSPAN4-211ENST00000468468 KIF3BO15066 747 aa21.13■□□□□ 0.97
TSPAN4-211ENST00000468468 PARD3Q8TEW0 1356 aa21.12■□□□□ 0.97
TSPAN4-211ENST00000468468 SALL2Q9Y467 1007 aaPredicted RBP21.11■□□□□ 0.97
TSPAN4-211ENST00000468468 GPRASP1Q5JY77 1395 aa21.11■□□□□ 0.97
TSPAN4-211ENST00000468468 PER1O15534 1290 aaPredicted RBP21.1■□□□□ 0.97
TSPAN4-211ENST00000468468 CD109Q6YHK3 1445 aa21.1■□□□□ 0.97
TSPAN4-211ENST00000468468 DEPDC5O75140 1603 aa21.08■□□□□ 0.97
TSPAN4-211ENST00000468468 RRP1P56182 461 aaKnown RBP21.08■□□□□ 0.97
TSPAN4-211ENST00000468468 TESK2Q96S53 571 aa21.06■□□□□ 0.96
TSPAN4-211ENST00000468468 RCAN3Q9UKA8 241 aa21.06■□□□□ 0.96
TSPAN4-211ENST00000468468 COL17A1Q9UMD9 1497 aaPredicted RBP21.06■□□□□ 0.96
TSPAN4-211ENST00000468468 DISP3Q9P2K9 1392 aa21.06■□□□□ 0.96
TSPAN4-211ENST00000468468 PRDM15P57071 1507 aaPredicted RBP21.05■□□□□ 0.96
TSPAN4-211ENST00000468468 KIDINS220Q9ULH0 1771 aa21.05■□□□□ 0.96
TSPAN4-211ENST00000468468 PDE3BQ13370 1112 aa21.05■□□□□ 0.96
TSPAN4-211ENST00000468468 CC2D1BQ5T0F9 858 aaKnown RBP21.05■□□□□ 0.96
TSPAN4-211ENST00000468468 ZNF518AQ6AHZ1 1483 aa21.05■□□□□ 0.96
TSPAN4-211ENST00000468468 LAMC1P11047 1609 aa21.04■□□□□ 0.96
TSPAN4-211ENST00000468468 KANK1Q14678 1352 aa21.04■□□□□ 0.96
TSPAN4-211ENST00000468468 NOP58Q9Y2X3 529 aaKnown RBP21.04■□□□□ 0.96
TSPAN4-211ENST00000468468 WASHC2CQ9Y4E1 1318 aa21.03■□□□□ 0.96
TSPAN4-211ENST00000468468 EXOC6Q8TAG9 804 aa21.03■□□□□ 0.96
TSPAN4-211ENST00000468468 PANK3Q9H999 370 aa21.02■□□□□ 0.96
TSPAN4-211ENST00000468468 TRPM2O94759 1503 aa21.02■□□□□ 0.95
TSPAN4-211ENST00000468468 DEKP35659 375 aaKnown RBP21.02■□□□□ 0.95
TSPAN4-211ENST00000468468 VWDEQ8N2E2 1590 aa21.01■□□□□ 0.95
TSPAN4-211ENST00000468468 TET3O43151 1660 aa21.01■□□□□ 0.95
TSPAN4-211ENST00000468468 TMF1P82094 1093 aa21.01■□□□□ 0.95
TSPAN4-211ENST00000468468 MROH1Q8NDA8 1641 aa21.01■□□□□ 0.95
TSPAN4-211ENST00000468468 PTPRTO14522 1441 aa21.01■□□□□ 0.95
TSPAN4-211ENST00000468468 EIF2AK4Q9P2K8 1649 aaKnown RBP21.01■□□□□ 0.95
TSPAN4-211ENST00000468468 SPHKAPQ2M3C7 1700 aa21■□□□□ 0.95
TSPAN4-211ENST00000468468 POGZQ7Z3K3 1410 aa20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms