RNA–Protein interactions for RNA: ENST00000467853.5

PSMD6-204, Transcript of proteasome 26S subunit, non-ATPase 6, humanhuman

TSL 1 (best)

Gene PSMD6, Length 4,583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD6-204ENST00000467853 WASHC2CQ9Y4E1 1318 aa8.43□□□□□ -1.06
PSMD6-204ENST00000467853 RRP1P56182 461 aaKnown RBP8.43□□□□□ -1.06
PSMD6-204ENST00000467853 ZNF777Q9ULD5 760 aaPredicted RBP8.43□□□□□ -1.06
PSMD6-204ENST00000467853 NLRP13Q86W25 1043 aa8.43□□□□□ -1.06
PSMD6-204ENST00000467853 NUP155O75694 1391 aa8.43□□□□□ -1.06
PSMD6-204ENST00000467853 KDM5DQ9BY66 1539 aa8.43□□□□□ -1.06
PSMD6-204ENST00000467853 BCORL1Q5H9F3 1711 aa8.42□□□□□ -1.06
PSMD6-204ENST00000467853 DDRGK1Q96HY6 314 aa8.42□□□□□ -1.06
PSMD6-204ENST00000467853 PPM1GO15355 546 aaPredicted RBP8.42□□□□□ -1.06
PSMD6-204ENST00000467853 NBR1Q14596 966 aa8.42□□□□□ -1.06
PSMD6-204ENST00000467853 RCAN3Q9UKA8 241 aa8.42□□□□□ -1.06
PSMD6-204ENST00000467853 PLEKHD1A6NEE1 506 aa8.42□□□□□ -1.06
PSMD6-204ENST00000467853 GRIN2AQ12879 1464 aa8.42□□□□□ -1.06
PSMD6-204ENST00000467853 ZMYM4Q5VZL5 1548 aa8.41□□□□□ -1.06
PSMD6-204ENST00000467853 PRG4Q92954 1404 aaPredicted RBP8.41□□□□□ -1.06
PSMD6-204ENST00000467853 RSPH4AQ5TD94 716 aa8.41□□□□□ -1.06
PSMD6-204ENST00000467853 PLEKHH2Q8IVE3 1493 aa8.4□□□□□ -1.06
PSMD6-204ENST00000467853 CNGB1Q14028 1251 aaPredicted RBP8.4□□□□□ -1.06
PSMD6-204ENST00000467853 C9orf84Q5VXU9 1444 aa8.4□□□□□ -1.06
PSMD6-204ENST00000467853 MAGI1Q96QZ7 1491 aaPredicted RBP8.39□□□□□ -1.07
PSMD6-204ENST00000467853 PAK3O75914 559 aaPredicted RBP8.39□□□□□ -1.07
PSMD6-204ENST00000467853 ST20-MTHFSA0A0A6YYL1 179 aa8.39□□□□□ -1.07
PSMD6-204ENST00000467853 CEP170Q5SW79 1584 aa8.38□□□□□ -1.07
PSMD6-204ENST00000467853 DCAF11Q8TEB1 546 aa8.38□□□□□ -1.07
PSMD6-204ENST00000467853 PARD3Q8TEW0 1356 aa8.37□□□□□ -1.07
PSMD6-204ENST00000467853 ARHGEF5Q12774 1597 aa8.37□□□□□ -1.07
PSMD6-204ENST00000467853 PDE4AP27815 886 aa8.37□□□□□ -1.07
PSMD6-204ENST00000467853 CHMP7Q8WUX9 453 aaPredicted RBP8.37□□□□□ -1.07
PSMD6-204ENST00000467853 KDM2AQ9Y2K7 1162 aa8.37□□□□□ -1.07
PSMD6-204ENST00000467853 E9PCH4 1651 aa8.37□□□□□ -1.07
PSMD6-204ENST00000467853 DAXXQ9UER7 740 aaPredicted RBP8.37□□□□□ -1.07
PSMD6-204ENST00000467853 NPM3O75607 178 aaKnown RBP8.37□□□□□ -1.07
PSMD6-204ENST00000467853 PTPRGP23470 1445 aa8.37□□□□□ -1.07
PSMD6-204ENST00000467853 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.36□□□□□ -1.07
PSMD6-204ENST00000467853 EXOC6Q8TAG9 804 aa8.36□□□□□ -1.07
PSMD6-204ENST00000467853 CCDC144AA2RUR9 1427 aa8.36□□□□□ -1.07
PSMD6-204ENST00000467853 BACH2Q9BYV9 841 aa8.36□□□□□ -1.07
PSMD6-204ENST00000467853 SYNJ2O15056 1496 aa8.35□□□□□ -1.07
PSMD6-204ENST00000467853 LAMC1P11047 1609 aa8.35□□□□□ -1.07
PSMD6-204ENST00000467853 NPM2Q86SE8 214 aaKnown RBP8.35□□□□□ -1.07
PSMD6-204ENST00000467853 EIF2AK4Q9P2K8 1649 aaKnown RBP8.35□□□□□ -1.07
PSMD6-204ENST00000467853 PLB1Q6P1J6 1458 aa8.34□□□□□ -1.07
PSMD6-204ENST00000467853 TMF1P82094 1093 aa8.34□□□□□ -1.07
PSMD6-204ENST00000467853 ZNF608Q9ULD9 1512 aaPredicted RBP8.34□□□□□ -1.07
PSMD6-204ENST00000467853 CDC42BPAQ5VT25 1732 aa8.34□□□□□ -1.07
PSMD6-204ENST00000467853 ABCC10Q5T3U5 1492 aa8.34□□□□□ -1.07
PSMD6-204ENST00000467853 NUP160Q12769 1436 aa8.34□□□□□ -1.08
PSMD6-204ENST00000467853 CCDC141Q6ZP82 1450 aa8.34□□□□□ -1.08
PSMD6-204ENST00000467853 GPRASP1Q5JY77 1395 aa8.33□□□□□ -1.08
PSMD6-204ENST00000467853 EIF4G3O43432 1585 aaKnown RBP8.33□□□□□ -1.08
PSMD6-204ENST00000467853 PRAG1Q86YV5 1406 aa8.33□□□□□ -1.08
PSMD6-204ENST00000467853 CDCA8Q53HL2 280 aa8.33□□□□□ -1.08
PSMD6-204ENST00000467853 NEFMP07197 916 aa8.33□□□□□ -1.08
PSMD6-204ENST00000467853 JPH4Q96JJ6 628 aa8.33□□□□□ -1.08
PSMD6-204ENST00000467853 BLMP54132 1417 aaPredicted RBP8.33□□□□□ -1.08
PSMD6-204ENST00000467853 TRPM1Q7Z4N2 1603 aa8.32□□□□□ -1.08
PSMD6-204ENST00000467853 FAM135AQ9P2D6 1515 aa8.32□□□□□ -1.08
PSMD6-204ENST00000467853 CNKSR2Q8WXI2 1034 aa8.32□□□□□ -1.08
PSMD6-204ENST00000467853 COL17A1Q9UMD9 1497 aaPredicted RBP8.32□□□□□ -1.08
PSMD6-204ENST00000467853 ABCA8O94911 1581 aa8.32□□□□□ -1.08
PSMD6-204ENST00000467853 STAC3Q96MF2 364 aa8.31□□□□□ -1.08
PSMD6-204ENST00000467853 SLC24A1O60721 1099 aa8.31□□□□□ -1.08
PSMD6-204ENST00000467853 CENPQQ7L2Z9 268 aaPredicted RBP8.31□□□□□ -1.08
PSMD6-204ENST00000467853 WDR43Q15061 677 aaKnown RBP eCLIP8.31□□□□□ -1.08
PSMD6-204ENST00000467853 ERBINQ96RT1 1412 aa8.3□□□□□ -1.08
PSMD6-204ENST00000467853 EIF3AQ14152 1382 aaKnown RBP8.3□□□□□ -1.08
PSMD6-204ENST00000467853 ATP10BO94823 1461 aa8.3□□□□□ -1.08
PSMD6-204ENST00000467853 SALL2Q9Y467 1007 aaPredicted RBP8.3□□□□□ -1.08
PSMD6-204ENST00000467853 PRDM15P57071 1507 aaPredicted RBP8.29□□□□□ -1.08
PSMD6-204ENST00000467853 PER1O15534 1290 aaPredicted RBP8.29□□□□□ -1.08
PSMD6-204ENST00000467853 NGEFQ8N5V2 710 aa8.29□□□□□ -1.08
PSMD6-204ENST00000467853 MAST1Q9Y2H9 1570 aa8.29□□□□□ -1.08
PSMD6-204ENST00000467853 HNRNPMP52272 730 aaKnown RBP eCLIP8.29□□□□□ -1.08
PSMD6-204ENST00000467853 KNSTRNQ9Y448 316 aa8.29□□□□□ -1.08
PSMD6-204ENST00000467853 UNC13BO14795 1591 aa8.28□□□□□ -1.08
PSMD6-204ENST00000467853 FBLN2P98095 1184 aa8.28□□□□□ -1.08
PSMD6-204ENST00000467853 CRBNQ96SW2 442 aa8.28□□□□□ -1.08
PSMD6-204ENST00000467853 PANK3Q9H999 370 aa8.28□□□□□ -1.08
PSMD6-204ENST00000467853 TRHP20396 242 aaPredicted RBP8.28□□□□□ -1.08
PSMD6-204ENST00000467853 CC2D1BQ5T0F9 858 aaKnown RBP8.28□□□□□ -1.08
PSMD6-204ENST00000467853 LAS1LQ9Y4W2 734 aaKnown RBP8.28□□□□□ -1.08
PSMD6-204ENST00000467853 FAM161AQ3B820 660 aa8.27□□□□□ -1.09
PSMD6-204ENST00000467853 PREX2Q70Z35 1606 aa8.27□□□□□ -1.09
PSMD6-204ENST00000467853 GOLGA2Q08379 1002 aa8.26□□□□□ -1.09
PSMD6-204ENST00000467853 RGL3Q3MIN7 710 aa8.26□□□□□ -1.09
PSMD6-204ENST00000467853 ATP10AO60312 1499 aa8.26□□□□□ -1.09
PSMD6-204ENST00000467853 A2MP01023 1474 aa8.26□□□□□ -1.09
PSMD6-204ENST00000467853 ERCC6Q03468 1493 aa8.26□□□□□ -1.09
PSMD6-204ENST00000467853 CDCA7LQ96GN5 454 aa8.26□□□□□ -1.09
PSMD6-204ENST00000467853 SENP3-EIF4A1A0A087X0R7 540 aa8.25□□□□□ -1.09
PSMD6-204ENST00000467853 IQGAP3Q86VI3 1631 aa8.25□□□□□ -1.09
PSMD6-204ENST00000467853 DUOX2Q9NRD8 1548 aa8.25□□□□□ -1.09
PSMD6-204ENST00000467853 PLXNC1O60486 1568 aa8.25□□□□□ -1.09
PSMD6-204ENST00000467853 TESK2Q96S53 571 aa8.25□□□□□ -1.09
PSMD6-204ENST00000467853 SAMD9LQ8IVG5 1584 aa8.25□□□□□ -1.09
PSMD6-204ENST00000467853 GSE1Q14687 1217 aa8.24□□□□□ -1.09
PSMD6-204ENST00000467853 CLASP1Q7Z460 1538 aa8.24□□□□□ -1.09
PSMD6-204ENST00000467853 DISP3Q9P2K9 1392 aa8.24□□□□□ -1.09
PSMD6-204ENST00000467853 NINLQ9Y2I6 1382 aa8.24□□□□□ -1.09
PSMD6-204ENST00000467853 NBPF1Q3BBV0 1214 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms