RNA–Protein interactions for RNA: ENST00000465229.5

EXOSC3-203, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-203ENST00000465229 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.07■■□□□ 1.6
EXOSC3-203ENST00000465229 EIF2AK4Q9P2K8 1649 aaKnown RBP25.07■■□□□ 1.6
EXOSC3-203ENST00000465229 ACIN1Q9UKV3 1341 aaKnown RBP25.05■■□□□ 1.6
EXOSC3-203ENST00000465229 NUP155O75694 1391 aa25.04■■□□□ 1.6
EXOSC3-203ENST00000465229 BCORL1Q5H9F3 1711 aa25.03■■□□□ 1.6
EXOSC3-203ENST00000465229 MLECQ14165 292 aa25.01■■□□□ 1.59
EXOSC3-203ENST00000465229 RNF17Q9BXT8 1623 aaKnown RBP24.99■■□□□ 1.59
EXOSC3-203ENST00000465229 DEPDC5O75140 1603 aa24.99■■□□□ 1.59
EXOSC3-203ENST00000465229 UNC13BO14795 1591 aa24.99■■□□□ 1.59
EXOSC3-203ENST00000465229 MROH1Q8NDA8 1641 aa24.98■■□□□ 1.59
EXOSC3-203ENST00000465229 PPP6R1Q9UPN7 881 aa24.97■■□□□ 1.59
EXOSC3-203ENST00000465229 KANK1Q14678 1352 aa24.96■■□□□ 1.59
EXOSC3-203ENST00000465229 PRDM15P57071 1507 aaPredicted RBP24.96■■□□□ 1.59
EXOSC3-203ENST00000465229 MPHOSPH9Q99550 1183 aa24.95■■□□□ 1.58
EXOSC3-203ENST00000465229 WASHC2CQ9Y4E1 1318 aa24.95■■□□□ 1.58
EXOSC3-203ENST00000465229 SLC4A1APQ9BWU0 796 aaKnown RBP24.94■■□□□ 1.58
EXOSC3-203ENST00000465229 KDM5DQ9BY66 1539 aa24.94■■□□□ 1.58
EXOSC3-203ENST00000465229 PZPP20742 1482 aa24.94■■□□□ 1.58
EXOSC3-203ENST00000465229 VWDEQ8N2E2 1590 aa24.93■■□□□ 1.58
EXOSC3-203ENST00000465229 FAM135AQ9P2D6 1515 aa24.91■■□□□ 1.58
EXOSC3-203ENST00000465229 CCER1Q8TC90 406 aaPredicted RBP24.9■■□□□ 1.58
EXOSC3-203ENST00000465229 DHX57Q6P158 1386 aaKnown RBP24.89■■□□□ 1.57
EXOSC3-203ENST00000465229 IQGAP3Q86VI3 1631 aa24.89■■□□□ 1.57
EXOSC3-203ENST00000465229 PKD2Q13563 968 aa24.87■■□□□ 1.57
EXOSC3-203ENST00000465229 ABCC3O15438 1527 aa24.87■■□□□ 1.57
EXOSC3-203ENST00000465229 ESF1Q9H501 851 aaKnown RBP24.86■■□□□ 1.57
EXOSC3-203ENST00000465229 LMTK2Q8IWU2 1503 aa24.86■■□□□ 1.57
EXOSC3-203ENST00000465229 FOXD1Q16676 465 aa24.83■■□□□ 1.57
EXOSC3-203ENST00000465229 CEP152O94986 1710 aa24.8■■□□□ 1.56
EXOSC3-203ENST00000465229 CNTLNQ9NXG0 1405 aa24.79■■□□□ 1.56
EXOSC3-203ENST00000465229 TET3O43151 1660 aa24.79■■□□□ 1.56
EXOSC3-203ENST00000465229 ZC3H13Q5T200 1668 aaKnown RBP24.79■■□□□ 1.56
EXOSC3-203ENST00000465229 ZMYM3Q14202 1370 aa24.78■■□□□ 1.56
EXOSC3-203ENST00000465229 EFCAB6Q5THR3 1501 aa24.77■■□□□ 1.56
EXOSC3-203ENST00000465229 CLTCQ00610 1675 aaKnown RBP24.77■■□□□ 1.56
EXOSC3-203ENST00000465229 NPATQ14207 1427 aa24.77■■□□□ 1.56
EXOSC3-203ENST00000465229 ARHGAP31Q2M1Z3 1444 aa24.77■■□□□ 1.56
EXOSC3-203ENST00000465229 ADAMTSL3P82987 1691 aa24.76■■□□□ 1.55
EXOSC3-203ENST00000465229 CAMSAP1Q5T5Y3 1602 aa24.74■■□□□ 1.55
EXOSC3-203ENST00000465229 MADDQ8WXG6 1647 aa24.73■■□□□ 1.55
EXOSC3-203ENST00000465229 E9PCH4 1651 aa24.73■■□□□ 1.55
EXOSC3-203ENST00000465229 FBXO31Q5XUX0 539 aaPredicted RBP24.72■■□□□ 1.55
EXOSC3-203ENST00000465229 RPRD2Q5VT52 1461 aaKnown RBP24.72■■□□□ 1.55
EXOSC3-203ENST00000465229 FER1L4A9Z1Z3 1794 aa24.72■■□□□ 1.55
EXOSC3-203ENST00000465229 ANKRD30BQ9BXX2 1392 aa24.72■■□□□ 1.55
EXOSC3-203ENST00000465229 CEBPAP49715 358 aaPredicted RBP24.71■■□□□ 1.55
EXOSC3-203ENST00000465229 PLA2R1Q13018 1463 aa24.69■■□□□ 1.54
EXOSC3-203ENST00000465229 KDM4FA0A1W2PPD8 638 aa24.69■■□□□ 1.54
EXOSC3-203ENST00000465229 PTPRTO14522 1441 aa24.68■■□□□ 1.54
EXOSC3-203ENST00000465229 MROH2AA6NES4 1674 aa24.67■■□□□ 1.54
EXOSC3-203ENST00000465229 CLSPNQ9HAW4 1339 aa24.67■■□□□ 1.54
EXOSC3-203ENST00000465229 NOS1P29475 1434 aa24.66■■□□□ 1.54
EXOSC3-203ENST00000465229 CFAP65Q6ZU64 1925 aaKnown RBP24.65■■□□□ 1.54
EXOSC3-203ENST00000465229 RIMS1Q86UR5 1692 aaKnown RBP24.65■■□□□ 1.54
EXOSC3-203ENST00000465229 PLPPR3Q6T4P5 718 aa24.64■■□□□ 1.54
EXOSC3-203ENST00000465229 ERVK-7P63135 1459 aa24.63■■□□□ 1.53
EXOSC3-203ENST00000465229 SIN3AQ96ST3 1273 aa24.63■■□□□ 1.53
EXOSC3-203ENST00000465229 C3P01024 1663 aa24.61■■□□□ 1.53
EXOSC3-203ENST00000465229 PTPRMP28827 1452 aa24.61■■□□□ 1.53
EXOSC3-203ENST00000465229 SPATA31D1Q6ZQQ2 1576 aa24.59■■□□□ 1.53
EXOSC3-203ENST00000465229 TRPM2O94759 1503 aa24.59■■□□□ 1.53
EXOSC3-203ENST00000465229 PREX1Q8TCU6 1659 aa24.58■■□□□ 1.53
EXOSC3-203ENST00000465229 SPHKAPQ2M3C7 1700 aa24.58■■□□□ 1.53
EXOSC3-203ENST00000465229 CCDC144AA2RUR9 1427 aa24.57■■□□□ 1.52
EXOSC3-203ENST00000465229 NEUROD1Q13562 356 aa24.57■■□□□ 1.52
EXOSC3-203ENST00000465229 SLC52A1Q9NWF4 448 aa24.57■■□□□ 1.52
EXOSC3-203ENST00000465229 TNRQ92752 1358 aa24.56■■□□□ 1.52
EXOSC3-203ENST00000465229 SYNMO15061 1565 aa24.56■■□□□ 1.52
EXOSC3-203ENST00000465229 IDI1Q13907 227 aa24.56■■□□□ 1.52
EXOSC3-203ENST00000465229 UGGT1Q9NYU2 1555 aa24.54■■□□□ 1.52
EXOSC3-203ENST00000465229 CLTCL1P53675 1640 aa24.5■■□□□ 1.51
EXOSC3-203ENST00000465229 PIK3C2BO00750 1634 aa24.48■■□□□ 1.51
EXOSC3-203ENST00000465229 CHGAP10645 457 aaKnown RBP24.46■■□□□ 1.51
EXOSC3-203ENST00000465229 SETD1BQ9UPS6 1966 aaKnown RBP24.44■■□□□ 1.5
EXOSC3-203ENST00000465229 NLRP1Q9C000 1473 aa24.44■■□□□ 1.5
EXOSC3-203ENST00000465229 RGL3Q3MIN7 710 aa24.44■■□□□ 1.5
EXOSC3-203ENST00000465229 SPATA31E1Q6ZUB1 1445 aa24.44■■□□□ 1.5
EXOSC3-203ENST00000465229 STAG3Q9UJ98 1225 aa24.42■■□□□ 1.5
EXOSC3-203ENST00000465229 L3MBTL2Q969R5 705 aa24.39■■□□□ 1.5
EXOSC3-203ENST00000465229 TIMELESSQ9UNS1 1208 aa24.39■■□□□ 1.49
EXOSC3-203ENST00000465229 TONSLQ96HA7 1378 aa24.38■■□□□ 1.49
EXOSC3-203ENST00000465229 ADGRB3O60242 1522 aa24.37■■□□□ 1.49
EXOSC3-203ENST00000465229 A2ML1A8K2U0 1454 aa24.37■■□□□ 1.49
EXOSC3-203ENST00000465229 ZNF326Q5BKZ1 582 aaKnown RBP24.36■■□□□ 1.49
EXOSC3-203ENST00000465229 TMEM131LA2VDJ0 1609 aa24.36■■□□□ 1.49
EXOSC3-203ENST00000465229 MYO3AQ8NEV4 1616 aa24.36■■□□□ 1.49
EXOSC3-203ENST00000465229 KIF1BO60333 1816 aa24.36■■□□□ 1.49
EXOSC3-203ENST00000465229 NEURL4Q96JN8 1562 aa24.35■■□□□ 1.49
EXOSC3-203ENST00000465229 UHRF1BP1Q6BDS2 1440 aa24.35■■□□□ 1.49
EXOSC3-203ENST00000465229 DCAF11Q8TEB1 546 aa24.33■■□□□ 1.49
EXOSC3-203ENST00000465229 THEMISQ8N1K5 641 aaPredicted RBP24.32■■□□□ 1.48
EXOSC3-203ENST00000465229 CEP170BQ9Y4F5 1589 aaPredicted RBP24.32■■□□□ 1.48
EXOSC3-203ENST00000465229 RPGRIP1LQ68CZ1 1315 aa24.32■■□□□ 1.48
EXOSC3-203ENST00000465229 KDM2AQ9Y2K7 1162 aa24.3■■□□□ 1.48
EXOSC3-203ENST00000465229 UBR1Q8IWV7 1749 aa24.3■■□□□ 1.48
EXOSC3-203ENST00000465229 KDM5AP29375 1690 aaKnown RBP24.28■■□□□ 1.48
EXOSC3-203ENST00000465229 TMEM2Q9UHN6 1383 aa24.28■■□□□ 1.48
EXOSC3-203ENST00000465229 MYO5BQ9ULV0 1848 aa24.28■■□□□ 1.48
EXOSC3-203ENST00000465229 PPP1R15AO75807 674 aaPredicted RBP24.27■■□□□ 1.48
EXOSC3-203ENST00000465229 NUTM2DQ5VT03 806 aaPredicted RBP24.26■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms