RNA–Protein interactions for RNA: ENST00000465155.5

ATF3-208, Transcript of activating transcription factor 3, humanhuman

TSL 2

Gene ATF3, Length 1,626 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-208ENST00000465155 ATP10AO60312 1499 aa19.89■□□□□ 0.77
ATF3-208ENST00000465155 TRIM52Q96A61 297 aa19.86■□□□□ 0.77
ATF3-208ENST00000465155 REREQ9P2R6 1566 aa19.86■□□□□ 0.77
ATF3-208ENST00000465155 UNC13BO14795 1591 aa19.85■□□□□ 0.77
ATF3-208ENST00000465155 KIF3BO15066 747 aa19.84■□□□□ 0.77
ATF3-208ENST00000465155 ACIN1Q9UKV3 1341 aaKnown RBP19.83■□□□□ 0.77
ATF3-208ENST00000465155 BCORL1Q5H9F3 1711 aa19.83■□□□□ 0.77
ATF3-208ENST00000465155 DEPDC5O75140 1603 aa19.83■□□□□ 0.76
ATF3-208ENST00000465155 SIGLEC1Q9BZZ2 1709 aa19.82■□□□□ 0.76
ATF3-208ENST00000465155 RNF17Q9BXT8 1623 aaKnown RBP19.8■□□□□ 0.76
ATF3-208ENST00000465155 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.8■□□□□ 0.76
ATF3-208ENST00000465155 NUP155O75694 1391 aa19.8■□□□□ 0.76
ATF3-208ENST00000465155 DHX57Q6P158 1386 aaKnown RBP19.79■□□□□ 0.76
ATF3-208ENST00000465155 MROH1Q8NDA8 1641 aa19.79■□□□□ 0.76
ATF3-208ENST00000465155 AGLP35573 1532 aa19.78■□□□□ 0.76
ATF3-208ENST00000465155 KDM5DQ9BY66 1539 aa19.78■□□□□ 0.76
ATF3-208ENST00000465155 MSH5O43196 834 aa19.78■□□□□ 0.76
ATF3-208ENST00000465155 PRDM15P57071 1507 aaPredicted RBP19.77■□□□□ 0.76
ATF3-208ENST00000465155 IQGAP3Q86VI3 1631 aa19.77■□□□□ 0.76
ATF3-208ENST00000465155 CCER1Q8TC90 406 aaPredicted RBP19.76■□□□□ 0.75
ATF3-208ENST00000465155 PZPP20742 1482 aa19.76■□□□□ 0.75
ATF3-208ENST00000465155 GGT6Q6P531 493 aa19.76■□□□□ 0.75
ATF3-208ENST00000465155 FAM135AQ9P2D6 1515 aa19.75■□□□□ 0.75
ATF3-208ENST00000465155 MPHOSPH9Q99550 1183 aa19.75■□□□□ 0.75
ATF3-208ENST00000465155 KANK1Q14678 1352 aa19.74■□□□□ 0.75
ATF3-208ENST00000465155 SLC4A1APQ9BWU0 796 aaKnown RBP19.73■□□□□ 0.75
ATF3-208ENST00000465155 VWDEQ8N2E2 1590 aa19.73■□□□□ 0.75
ATF3-208ENST00000465155 ARID4BQ4LE39 1312 aaPredicted RBP19.72■□□□□ 0.75
ATF3-208ENST00000465155 CEP152O94986 1710 aa19.72■□□□□ 0.75
ATF3-208ENST00000465155 TET3O43151 1660 aa19.68■□□□□ 0.74
ATF3-208ENST00000465155 MLECQ14165 292 aa19.68■□□□□ 0.74
ATF3-208ENST00000465155 ZC3H13Q5T200 1668 aaKnown RBP19.67■□□□□ 0.74
ATF3-208ENST00000465155 PKD2Q13563 968 aa19.66■□□□□ 0.74
ATF3-208ENST00000465155 WASHC2CQ9Y4E1 1318 aa19.66■□□□□ 0.74
ATF3-208ENST00000465155 ABCC3O15438 1527 aa19.66■□□□□ 0.74
ATF3-208ENST00000465155 LMTK2Q8IWU2 1503 aa19.65■□□□□ 0.74
ATF3-208ENST00000465155 CAMSAP1Q5T5Y3 1602 aa19.64■□□□□ 0.73
ATF3-208ENST00000465155 E9PCH4 1651 aa19.64■□□□□ 0.73
ATF3-208ENST00000465155 CLTCQ00610 1675 aaKnown RBP19.63■□□□□ 0.73
ATF3-208ENST00000465155 EFCAB6Q5THR3 1501 aa19.63■□□□□ 0.73
ATF3-208ENST00000465155 CLSPNQ9HAW4 1339 aa19.61■□□□□ 0.73
ATF3-208ENST00000465155 ESF1Q9H501 851 aaKnown RBP19.58■□□□□ 0.72
ATF3-208ENST00000465155 FER1L4A9Z1Z3 1794 aa19.57■□□□□ 0.72
ATF3-208ENST00000465155 CFAP65Q6ZU64 1925 aaKnown RBP19.57■□□□□ 0.72
ATF3-208ENST00000465155 ANKRD30BQ9BXX2 1392 aa19.56■□□□□ 0.72
ATF3-208ENST00000465155 SPHKAPQ2M3C7 1700 aa19.56■□□□□ 0.72
ATF3-208ENST00000465155 RPRD2Q5VT52 1461 aaKnown RBP19.55■□□□□ 0.72
ATF3-208ENST00000465155 NPATQ14207 1427 aa19.55■□□□□ 0.72
ATF3-208ENST00000465155 ARHGAP31Q2M1Z3 1444 aa19.54■□□□□ 0.72
ATF3-208ENST00000465155 MROH2AA6NES4 1674 aa19.54■□□□□ 0.72
ATF3-208ENST00000465155 CNTLNQ9NXG0 1405 aa19.53■□□□□ 0.72
ATF3-208ENST00000465155 SIN3AQ96ST3 1273 aa19.53■□□□□ 0.72
ATF3-208ENST00000465155 MADDQ8WXG6 1647 aa19.52■□□□□ 0.71
ATF3-208ENST00000465155 PLA2R1Q13018 1463 aa19.51■□□□□ 0.71
ATF3-208ENST00000465155 ADAMTSL3P82987 1691 aa19.51■□□□□ 0.71
ATF3-208ENST00000465155 PREX1Q8TCU6 1659 aa19.51■□□□□ 0.71
ATF3-208ENST00000465155 NEUROD1Q13562 356 aa19.51■□□□□ 0.71
ATF3-208ENST00000465155 TRPM2O94759 1503 aa19.5■□□□□ 0.71
ATF3-208ENST00000465155 PTPRTO14522 1441 aa19.5■□□□□ 0.71
ATF3-208ENST00000465155 ZMYM3Q14202 1370 aa19.49■□□□□ 0.71
ATF3-208ENST00000465155 RIMS1Q86UR5 1692 aaKnown RBP19.48■□□□□ 0.71
ATF3-208ENST00000465155 CCDC144AA2RUR9 1427 aa19.47■□□□□ 0.71
ATF3-208ENST00000465155 C3P01024 1663 aa19.46■□□□□ 0.71
ATF3-208ENST00000465155 CLTCL1P53675 1640 aa19.45■□□□□ 0.7
ATF3-208ENST00000465155 NOS1P29475 1434 aa19.45■□□□□ 0.7
ATF3-208ENST00000465155 ERVK-7P63135 1459 aa19.45■□□□□ 0.7
ATF3-208ENST00000465155 FBXO31Q5XUX0 539 aaPredicted RBP19.45■□□□□ 0.7
ATF3-208ENST00000465155 SYNMO15061 1565 aa19.45■□□□□ 0.7
ATF3-208ENST00000465155 SPATA31D1Q6ZQQ2 1576 aa19.44■□□□□ 0.7
ATF3-208ENST00000465155 UGGT1Q9NYU2 1555 aa19.44■□□□□ 0.7
ATF3-208ENST00000465155 ZEB1P37275 1124 aaPredicted RBP19.42■□□□□ 0.7
ATF3-208ENST00000465155 PIK3C2BO00750 1634 aa19.4■□□□□ 0.7
ATF3-208ENST00000465155 CEBPAP49715 358 aaPredicted RBP19.4■□□□□ 0.7
ATF3-208ENST00000465155 KIF1BO60333 1816 aa19.4■□□□□ 0.7
ATF3-208ENST00000465155 TONSLQ96HA7 1378 aa19.39■□□□□ 0.69
ATF3-208ENST00000465155 TNRQ92752 1358 aa19.35■□□□□ 0.69
ATF3-208ENST00000465155 SLC52A1Q9NWF4 448 aa19.35■□□□□ 0.69
ATF3-208ENST00000465155 TIMELESSQ9UNS1 1208 aa19.35■□□□□ 0.69
ATF3-208ENST00000465155 IDI1Q13907 227 aa19.34■□□□□ 0.69
ATF3-208ENST00000465155 PTPRMP28827 1452 aa19.33■□□□□ 0.68
ATF3-208ENST00000465155 SPATA31E1Q6ZUB1 1445 aa19.33■□□□□ 0.68
ATF3-208ENST00000465155 RGL3Q3MIN7 710 aa19.33■□□□□ 0.68
ATF3-208ENST00000465155 CHGAP10645 457 aaKnown RBP19.32■□□□□ 0.68
ATF3-208ENST00000465155 ADGRB3O60242 1522 aa19.31■□□□□ 0.68
ATF3-208ENST00000465155 MYO5BQ9ULV0 1848 aa19.31■□□□□ 0.68
ATF3-208ENST00000465155 L3MBTL2Q969R5 705 aa19.31■□□□□ 0.68
ATF3-208ENST00000465155 NEURL4Q96JN8 1562 aa19.31■□□□□ 0.68
ATF3-208ENST00000465155 KDM4FA0A1W2PPD8 638 aa19.29■□□□□ 0.68
ATF3-208ENST00000465155 TMEM131LA2VDJ0 1609 aa19.29■□□□□ 0.68
ATF3-208ENST00000465155 MYO3AQ8NEV4 1616 aa19.28■□□□□ 0.68
ATF3-208ENST00000465155 NLRP1Q9C000 1473 aa19.27■□□□□ 0.68
ATF3-208ENST00000465155 STAG3Q9UJ98 1225 aa19.26■□□□□ 0.67
ATF3-208ENST00000465155 ZNF326Q5BKZ1 582 aaKnown RBP19.25■□□□□ 0.67
ATF3-208ENST00000465155 DCAF11Q8TEB1 546 aa19.25■□□□□ 0.67
ATF3-208ENST00000465155 UBR1Q8IWV7 1749 aa19.25■□□□□ 0.67
ATF3-208ENST00000465155 IFT172Q9UG01 1749 aa19.25■□□□□ 0.67
ATF3-208ENST00000465155 KDM5AP29375 1690 aaKnown RBP19.24■□□□□ 0.67
ATF3-208ENST00000465155 PPP1R15AO75807 674 aaPredicted RBP19.24■□□□□ 0.67
ATF3-208ENST00000465155 SETD1BQ9UPS6 1966 aaKnown RBP19.24■□□□□ 0.67
ATF3-208ENST00000465155 KDM2AQ9Y2K7 1162 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms